; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008350 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008350
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr11:17123496..17124239
RNA-Seq ExpressionPI0008350
SyntenyPI0008350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025424.1 uncharacterized protein E6C27_scaffold417G00080 [Cucumis melo var. makuwa]8.8e-4039.39Show/hide
Query:  FSVFPDSLNTFLNITLP-DEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV
        F+V P+ LNT+L + LP D     PTL+ L  ELT G V  W   G L  A L+VKY+ILH+I I +W+PS H+ST+S  L H ++L+GTG  V+ G F+
Subjt:  FSVFPDSLNTFLNITLP-DEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV

Query:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSI-RPPSSNLPPTDKLRTPNGGLLLPPSLANQVLH
         + L RH+D++ + +PIC P+    F+L    TIL P    G +P  + L+ RLFQ AH+P++        S    P          L L  SLAN++  
Subjt:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSI-RPPSSNLPPTDKLRTPNGGLLLPPSLANQVLH

Query:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVR
         L  ES +L+  I +LS+RR ++D+V+  ++
Subjt:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVR

KAA0059849.1 uncharacterized protein E6C27_scaffold108G001320 [Cucumis melo var. makuwa]1.5e-3941.77Show/hide
Query:  FSVFPDSLNTFL-NITLPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV
        F + P  +N FL N    +    +  ++ L SEL+GG+++ W  +G + AA LSVKYAILHKIGI +W PS H+S+VS  L   ++ I     VD G+F+
Subjt:  FSVFPDSLNTFL-NITLPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV

Query:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPP-SSNLPPTDKLRTPNGGLLLPPSLANQVLH
         +QL RH+ S+ VKLPI LPRFF   +L  N  IL  ++AP P P  L LSYRLFQ +HVPDI++ + P     +  T        G  +   LA+++L+
Subjt:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPP-SSNLPPTDKLRTPNGGLLLPPSLANQVLH

Query:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVRLLVPST
         LT++S SL+T+I  +SERR  IDS++  ++    S+
Subjt:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVRLLVPST

KAA0059938.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]2.1e-4139.34Show/hide
Query:  FSVFPDSLNTFLNITL-PDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV
        F+V PD LN++L ITL  D     PTL+ L  ELTGG +  WP  G L  A L+VKY+ILH+IG  +W+ S H+ST+S +L H ++L+GT   V+ G F+
Subjt:  FSVFPDSLNTFLNITL-PDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV

Query:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPPSSNLPPTDKLRTPNGG--LLLPPSLANQVL
         + L R++D++A+ +PIC PR    F+L    TI+ P +  G +P  + LS RLFQ  H PD+             T     P  G  + L  SLAN++L
Subjt:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPPSSNLPPTDKLRTPNGG--LLLPPSLANQVL

Query:  HVLTSESHSLSTIIHDLSERRKLIDSVVSSVRLLVPSTMEAHAD
          L +ESH+L+  I++L+ RR ++D+V+  +R     T    +D
Subjt:  HVLTSESHSLSTIIHDLSERRKLIDSVVSSVRLLVPSTMEAHAD

KAA0066488.1 uncharacterized protein E6C27_scaffold25G00260 [Cucumis melo var. makuwa]8.0e-4143.22Show/hide
Query:  FSVFPDSLNTFL-NITLPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV
        FS+ P  +N FL N    +     P++D L SEL+GG ++ WP +G + AA LSVKYAILHKIGI +W PS H+S+VS  L + ++ I     VD G F+
Subjt:  FSVFPDSLNTFL-NITLPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV

Query:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPP-SSNLPPTDKLRTPNGGLLLPPSLANQVLH
         ++L RH++S+ VKLPI LPRFF   +L  N  IL  ++AP P P  L LSYRLFQ  HV DI++ +       +  T        G  +   LA+++L+
Subjt:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPP-SSNLPPTDKLRTPNGGLLLPPSLANQVLH

Query:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVRLLVPS
         LT+ES SL T I  +SERR  IDS++  ++   PS
Subjt:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVRLLVPS

XP_008452370.1 PREDICTED: uncharacterized protein LOC103493432 [Cucumis melo]3.9e-4039.83Show/hide
Query:  FSVFPDSLNTFLNIT-LPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV
        F+V P+ LNT+L +  L D     PTL+ L  ELT G V  WP  G L  A L+VKY+ILH+I I +W+PS H+ST+S  L H ++L+GTG  V+ G F+
Subjt:  FSVFPDSLNTFLNIT-LPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV

Query:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSI-RPPSSNLPPTDKLRTPNGGLLLPPSLANQVLH
         + L RH+D++ + +PIC P+    F+L    TIL P    G +P  + L+ RLFQ AH+P++        S    P          L L  SLAN++L 
Subjt:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSI-RPPSSNLPPTDKLRTPNGGLLLPPSLANQVLH

Query:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVR
         L  ES +L+  I +LS+RR ++D+V+  ++
Subjt:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVR

TrEMBL top hitse value%identityAlignment
A0A1S3BUG4 uncharacterized protein LOC1034934321.9e-4039.83Show/hide
Query:  FSVFPDSLNTFLNIT-LPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV
        F+V P+ LNT+L +  L D     PTL+ L  ELT G V  WP  G L  A L+VKY+ILH+I I +W+PS H+ST+S  L H ++L+GTG  V+ G F+
Subjt:  FSVFPDSLNTFLNIT-LPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV

Query:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSI-RPPSSNLPPTDKLRTPNGGLLLPPSLANQVLH
         + L RH+D++ + +PIC P+    F+L    TIL P    G +P  + L+ RLFQ AH+P++        S    P          L L  SLAN++L 
Subjt:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSI-RPPSSNLPPTDKLRTPNGGLLLPPSLANQVLH

Query:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVR
         L  ES +L+  I +LS+RR ++D+V+  ++
Subjt:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVR

A0A5A7SIG0 Uncharacterized protein4.3e-4039.39Show/hide
Query:  FSVFPDSLNTFLNITLP-DEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV
        F+V P+ LNT+L + LP D     PTL+ L  ELT G V  W   G L  A L+VKY+ILH+I I +W+PS H+ST+S  L H ++L+GTG  V+ G F+
Subjt:  FSVFPDSLNTFLNITLP-DEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV

Query:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSI-RPPSSNLPPTDKLRTPNGGLLLPPSLANQVLH
         + L RH+D++ + +PIC P+    F+L    TIL P    G +P  + L+ RLFQ AH+P++        S    P          L L  SLAN++  
Subjt:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSI-RPPSSNLPPTDKLRTPNGGLLLPPSLANQVLH

Query:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVR
         L  ES +L+  I +LS+RR ++D+V+  ++
Subjt:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVR

A0A5A7UXI2 Flocculation protein FLO11-like1.0e-4139.34Show/hide
Query:  FSVFPDSLNTFLNITL-PDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV
        F+V PD LN++L ITL  D     PTL+ L  ELTGG +  WP  G L  A L+VKY+ILH+IG  +W+ S H+ST+S +L H ++L+GT   V+ G F+
Subjt:  FSVFPDSLNTFLNITL-PDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV

Query:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPPSSNLPPTDKLRTPNGG--LLLPPSLANQVL
         + L R++D++A+ +PIC PR    F+L    TI+ P +  G +P  + LS RLFQ  H PD+             T     P  G  + L  SLAN++L
Subjt:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPPSSNLPPTDKLRTPNGG--LLLPPSLANQVL

Query:  HVLTSESHSLSTIIHDLSERRKLIDSVVSSVRLLVPSTMEAHAD
          L +ESH+L+  I++L+ RR ++D+V+  +R     T    +D
Subjt:  HVLTSESHSLSTIIHDLSERRKLIDSVVSSVRLLVPSTMEAHAD

A0A5A7VFI0 Uncharacterized protein3.9e-4143.22Show/hide
Query:  FSVFPDSLNTFL-NITLPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV
        FS+ P  +N FL N    +     P++D L SEL+GG ++ WP +G + AA LSVKYAILHKIGI +W PS H+S+VS  L + ++ I     VD G F+
Subjt:  FSVFPDSLNTFL-NITLPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV

Query:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPP-SSNLPPTDKLRTPNGGLLLPPSLANQVLH
         ++L RH++S+ VKLPI LPRFF   +L  N  IL  ++AP P P  L LSYRLFQ  HV DI++ +       +  T        G  +   LA+++L+
Subjt:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPP-SSNLPPTDKLRTPNGGLLLPPSLANQVLH

Query:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVRLLVPS
         LT+ES SL T I  +SERR  IDS++  ++   PS
Subjt:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVRLLVPS

A0A5D3DMD7 Uncharacterized protein7.3e-4041.77Show/hide
Query:  FSVFPDSLNTFL-NITLPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV
        F + P  +N FL N    +    +  ++ L SEL+GG+++ W  +G + AA LSVKYAILHKIGI +W PS H+S+VS  L   ++ I     VD G+F+
Subjt:  FSVFPDSLNTFL-NITLPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFV

Query:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPP-SSNLPPTDKLRTPNGGLLLPPSLANQVLH
         +QL RH+ S+ VKLPI LPRFF   +L  N  IL  ++AP P P  L LSYRLFQ +HVPDI++ + P     +  T        G  +   LA+++L+
Subjt:  VSQLKRHIDSYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPP-SSNLPPTDKLRTPNGGLLLPPSLANQVLH

Query:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVRLLVPST
         LT++S SL+T+I  +SERR  IDS++  ++    S+
Subjt:  VLTSESHSLSTIIHDLSERRKLIDSVVSSVRLLVPST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTTCTCGGTTTTCCCTGATTCCTTAAATACTTTCCTTAACATTACTCTTCCTGATGAACCCCAAATCTTGCCTACCCTCGATGAGCTTCCCTCCGAGTTAACAGG
AGGAATGGTAACTCACTGGCCTTCTAGTGGCTATCTTTCTGCAGCTCGTCTCAGTGTTAAGTATGCCATTCTTCATAAGATCGGAATCCATAGTTGGCTTCCTTCTCATC
ATTCTTCAACTGTGTCCCAAGTCCTGGCTCATTTAATTTTTCTTATTGGAACAGGCAAACCTGTTGACTTTGGCTCATTTGTTGTCAGTCAATTAAAACGCCATATCGAT
TCCTATGCAGTCAAGCTTCCTATTTGTTTGCCCCGATTCTTCTGTAACTTCGTTCTCACCCACAATCGCACCATTCTTCACCCAAATGAGGCTCCTGGTCCTTCTCCCTC
CAAGCTCCATTTAAGTTATCGTTTATTTCAAGAAGCTCATGTACCTGATATTGAGTATTCTATTCGTCCTCCGTCTTCTAACCTGCCTCCCACTGATAAGCTGAGAACTC
CTAACGGTGGTTTATTGCTTCCTCCTTCATTAGCAAATCAAGTTCTTCATGTCCTGACCTCTGAATCTCACAGCCTCAGCACTATAATTCATGATCTTTCAGAGAGACGA
AAGCTCATTGACTCTGTTGTCTCATCTGTTCGGTTGCTGGTTCCTTCCACTATGGAAGCTCATGCTGATCAACCTAGCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTTCTCGGTTTTCCCTGATTCCTTAAATACTTTCCTTAACATTACTCTTCCTGATGAACCCCAAATCTTGCCTACCCTCGATGAGCTTCCCTCCGAGTTAACAGG
AGGAATGGTAACTCACTGGCCTTCTAGTGGCTATCTTTCTGCAGCTCGTCTCAGTGTTAAGTATGCCATTCTTCATAAGATCGGAATCCATAGTTGGCTTCCTTCTCATC
ATTCTTCAACTGTGTCCCAAGTCCTGGCTCATTTAATTTTTCTTATTGGAACAGGCAAACCTGTTGACTTTGGCTCATTTGTTGTCAGTCAATTAAAACGCCATATCGAT
TCCTATGCAGTCAAGCTTCCTATTTGTTTGCCCCGATTCTTCTGTAACTTCGTTCTCACCCACAATCGCACCATTCTTCACCCAAATGAGGCTCCTGGTCCTTCTCCCTC
CAAGCTCCATTTAAGTTATCGTTTATTTCAAGAAGCTCATGTACCTGATATTGAGTATTCTATTCGTCCTCCGTCTTCTAACCTGCCTCCCACTGATAAGCTGAGAACTC
CTAACGGTGGTTTATTGCTTCCTCCTTCATTAGCAAATCAAGTTCTTCATGTCCTGACCTCTGAATCTCACAGCCTCAGCACTATAATTCATGATCTTTCAGAGAGACGA
AAGCTCATTGACTCTGTTGTCTCATCTGTTCGGTTGCTGGTTCCTTCCACTATGGAAGCTCATGCTGATCAACCTAGCTCTTAA
Protein sequenceShow/hide protein sequence
MPFSVFPDSLNTFLNITLPDEPQILPTLDELPSELTGGMVTHWPSSGYLSAARLSVKYAILHKIGIHSWLPSHHSSTVSQVLAHLIFLIGTGKPVDFGSFVVSQLKRHID
SYAVKLPICLPRFFCNFVLTHNRTILHPNEAPGPSPSKLHLSYRLFQEAHVPDIEYSIRPPSSNLPPTDKLRTPNGGLLLPPSLANQVLHVLTSESHSLSTIIHDLSERR
KLIDSVVSSVRLLVPSTMEAHADQPSS