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PI0008365 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008365
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr05:9226423..9226620
RNA-Seq ExpressionPI0008365
SyntenyPI0008365
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046468.1 hypothetical protein E6C27_scaffold543G00470 [Cucumis melo var. makuwa]6.3e-1461.9Show/hide
Query:  FQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN
        F+ +DRENL DAWS  KR+VKAC H+ I +C+LME FYF L++  QQT D VFVGG+L++SYN
Subjt:  FQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]1.1e-1867.69Show/hide
Query:  MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN
        M+F+Q+DRENL D W RFKRM+K CPH+ IPEC+LME FYFGL+K   Q+A+ VF GGML+SSYN
Subjt:  MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN

KAA0061983.1 uncharacterized protein E6C27_scaffold89G002850 [Cucumis melo var. makuwa]2.6e-1563.49Show/hide
Query:  FQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN
        F+Q+DR+NL+DAWS FKRMVKAC H+ I + +LME FYFGL+K  +Q+AD++F+GG+L+SSYN
Subjt:  FQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]2.1e-1764.62Show/hide
Query:  MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN
        M F+Q+D+EN++D WSRFKR+VKACP + IPEC+ MEVFYFGL+K   Q  + +FVGGML+SSYN
Subjt:  MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN

TYJ96998.1 hypothetical protein E5676_scaffold506G00480 [Cucumis melo var. makuwa]1.7e-1456.92Show/hide
Query:  MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN
        M+ +Q+D ENL +AW RFKRM+K CPH+ IP CILME  YFGL+K  QQ+ D V +GG+L+  Y+
Subjt:  MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein1.0e-1764.62Show/hide
Query:  MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN
        M F+Q+D+EN++D WSRFKR+VKACP + IPEC+ MEVFYFGL+K   Q  + +FVGGML+SSYN
Subjt:  MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN

A0A5A7TUE1 Uncharacterized protein3.1e-1461.9Show/hide
Query:  FQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN
        F+ +DRENL DAWS  KR+VKAC H+ I +C+LME FYF L++  QQT D VFVGG+L++SYN
Subjt:  FQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN

A0A5A7V1F3 Retrotrans_gag domain-containing protein1.2e-1563.49Show/hide
Query:  FQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN
        F+Q+DR+NL+DAWS FKRMVKAC H+ I + +LME FYFGL+K  +Q+AD++F+GG+L+SSYN
Subjt:  FQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN

A0A5D3BFN1 Uncharacterized protein8.1e-1556.92Show/hide
Query:  MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN
        M+ +Q+D ENL +AW RFKRM+K CPH+ IP CILME  YFGL+K  QQ+ D V +GG+L+  Y+
Subjt:  MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN

A0A5D3CC26 Uncharacterized protein5.4e-1967.69Show/hide
Query:  MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN
        M+F+Q+DRENL D W RFKRM+K CPH+ IPEC+LME FYFGL+K   Q+A+ VF GGML+SSYN
Subjt:  MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTCCAACAGAAGGATAGAGAGAACTTATATGACGCGTGGAGTAGGTTCAAAAGGATGGTTAAAGCATGCCCCCACAATCGCATTCCTGAATGCATATTGATGGA
GGTGTTCTACTTTGGTTTGAACAAGGCGATGCAGCAGACTGCTGATGCTGTGTTTGTAGGTGGTATGCTTAAGAGTTCATACAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTCCAACAGAAGGATAGAGAGAACTTATATGACGCGTGGAGTAGGTTCAAAAGGATGGTTAAAGCATGCCCCCACAATCGCATTCCTGAATGCATATTGATGGA
GGTGTTCTACTTTGGTTTGAACAAGGCGATGCAGCAGACTGCTGATGCTGTGTTTGTAGGTGGTATGCTTAAGAGTTCATACAACTAG
Protein sequenceShow/hide protein sequence
MSFQQKDRENLYDAWSRFKRMVKACPHNRIPECILMEVFYFGLNKAMQQTADAVFVGGMLKSSYN