; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008366 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008366
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionagamous-like MADS-box protein AGL62
Genome locationchr06:9789443..9793995
RNA-Seq ExpressionPI0008366
SyntenyPI0008366
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041553.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa]5.2e-5059.07Show/hide
Query:  MNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP-----------
        M KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPNDKVFCFGH DVDVLLDRYLT NLSPPKPAESYIP           
Subjt:  MNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP-----------

Query:  -------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPM-------TSSWFHLSGNH
               KKRA E+IRA EDSRKNGGFW QEA          +F+SALMDLRAKVAER+EK T   I   +LPAL PPPQP        +SS FHL+GNH
Subjt:  -------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPM-------TSSWFHLSGNH

Query:  QQLAPPTAFHLAKNY
        QQL PP AFHLA N+
Subjt:  QQLAPPTAFHLAKNY

KAG7013413.1 Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-4255.78Show/hide
Query:  QTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP-------
        ++IPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPNDKVFCFGH DVDVLLDRYLT NLSPPKPAESY+P       
Subjt:  QTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP-------

Query:  -----------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPAL--RPPPQPMTSSWFHLSGNH
                   KKRA E+I+A E+SR +GGFW +EA          EF+S+LMDLRAKVAE++EK T   I   +LPAL   PPPQPMT   FHL+GNH
Subjt:  -----------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPAL--RPPPQPMTSSWFHLSGNH

XP_004147877.3 agamous-like MADS-box protein AGL62 [Cucumis sativus]1.7e-5662.79Show/hide
Query:  MEKLQTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP---
        MEKL TIPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPNDK+FCFGH DVDVLLDRYLT NLSPPKPAESYIP   
Subjt:  MEKLQTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP---

Query:  ---------------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPMTSSWFHLSGN
                       KKRA E+IRA EDSRKNGGFW QEA          +F+SALMDLRAKVAER+EK T   I   +LPAL PPPQPMTSS FHL GN
Subjt:  ---------------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPMTSSWFHLSGN

Query:  HQQLAPPTAFHLAKN
        HQ+L PPTAFHLA N
Subjt:  HQQLAPPTAFHLAKN

XP_008466532.1 PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]7.7e-5460.09Show/hide
Query:  MEKLQTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP---
        MEKL TIPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPNDKVFCFGH DVDVLLDRYLT NLSPPKPAESYIP   
Subjt:  MEKLQTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP---

Query:  ---------------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPM-------TSS
                       KKRA E+IRA EDSRKNGGFW QEA          +F+SALMDLRAKVAER+EK T   I   +LPAL PPPQP        +SS
Subjt:  ---------------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPM-------TSS

Query:  WFHLSGNHQQLAPPTAFHLAKNY
         FHL+GNHQQL PP AFHLA N+
Subjt:  WFHLSGNHQQLAPPTAFHLAKNY

XP_038875004.1 agamous-like MADS-box protein AGL62 [Benincasa hispida]6.8e-5057.8Show/hide
Query:  MEKLQTIPMNKTLRRQNIQIKKLEKRAVSK--SQSRRA-----------LCSLWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP-
        MEKLQ+IPM KTL RQ I+IKKLEK++  +     RRA           LC +  EVAIIVFSPNDKVFCFGH DV+ LLDRYL KNLSPPKPAESYIP 
Subjt:  MEKLQTIPMNKTLRRQNIQIKKLEKRAVSK--SQSRRA-----------LCSLWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP-

Query:  -----------------KKRAVEMIRAMEDSRKNGGFWLQE----------AEFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPMTSSWFHLS
                         KKRA ++IRA EDSRKNG FW QE            F+SALMDLRA+VAER+EK T   I   +LPAL PPPQ MTSS FHL+
Subjt:  -----------------KKRAVEMIRAMEDSRKNGGFWLQE----------AEFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPMTSSWFHLS

Query:  GNHQQLAPPTAFHLAKNY
        GN Q L PPT F LA N+
Subjt:  GNHQQLAPPTAFHLAKNY

TrEMBL top hitse value%identityAlignment
A0A0A0LE01 MADS-box domain-containing protein8.0e-5762.79Show/hide
Query:  MEKLQTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP---
        MEKL TIPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPNDK+FCFGH DVDVLLDRYLT NLSPPKPAESYIP   
Subjt:  MEKLQTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP---

Query:  ---------------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPMTSSWFHLSGN
                       KKRA E+IRA EDSRKNGGFW QEA          +F+SALMDLRAKVAER+EK T   I   +LPAL PPPQPMTSS FHL GN
Subjt:  ---------------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPMTSSWFHLSGN

Query:  HQQLAPPTAFHLAKN
        HQ+L PPTAFHLA N
Subjt:  HQQLAPPTAFHLAKN

A0A1S3CRI8 agamous-like MADS-box protein AGL623.7e-5460.09Show/hide
Query:  MEKLQTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP---
        MEKL TIPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPNDKVFCFGH DVDVLLDRYLT NLSPPKPAESYIP   
Subjt:  MEKLQTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP---

Query:  ---------------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPM-------TSS
                       KKRA E+IRA EDSRKNGGFW QEA          +F+SALMDLRAKVAER+EK T   I   +LPAL PPPQP        +SS
Subjt:  ---------------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPM-------TSS

Query:  WFHLSGNHQQLAPPTAFHLAKNY
         FHL+GNHQQL PP AFHLA N+
Subjt:  WFHLSGNHQQLAPPTAFHLAKNY

A0A5D3D807 Agamous-like MADS-box protein AGL622.5e-5059.07Show/hide
Query:  MNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP-----------
        M KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPNDKVFCFGH DVDVLLDRYLT NLSPPKPAESYIP           
Subjt:  MNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP-----------

Query:  -------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPM-------TSSWFHLSGNH
               KKRA E+IRA EDSRKNGGFW QEA          +F+SALMDLRAKVAER+EK T   I   +LPAL PPPQP        +SS FHL+GNH
Subjt:  -------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPM-------TSSWFHLSGNH

Query:  QQLAPPTAFHLAKNY
        QQL PP AFHLA N+
Subjt:  QQLAPPTAFHLAKNY

A0A6J1H4M6 agamous-like MADS-box protein AGL621.9e-4255.78Show/hide
Query:  QTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP-------
        ++IPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPNDKVFCFGH DVDVLLDRYLT NLSPPKPAESY+P       
Subjt:  QTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP-------

Query:  -----------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPP--QPMTSSWFHLSGNH
                   KKRA E+I+A E+SR +GGFW +EA          EF+S+LMDLRAKVAE++EK T   I   +LPAL PPP  QPMT   FHL+GNH
Subjt:  -----------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPP--QPMTSSWFHLSGNH

A0A6J1KVC9 agamous-like MADS-box protein AGL625.6e-4254.82Show/hide
Query:  QTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP-------
        ++IPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPNDKVFCFGH +VDVLLDRYLT NLSPPKPAESY+P       
Subjt:  QTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP-------

Query:  -----------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPMTSSWFHLSGNH
                   KKRA E+I+A E+SR +GGFW +EA          EF+S+LMDLRAKVAE++EK T   I   +LPAL PPP PM    FHL+GNH
Subjt:  -----------KKRAVEMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPMTSSWFHLSGNH

SwissProt top hitse value%identityAlignment
O80807 Agamous-like MADS-box protein AGL233.4e-0442.47Show/hide
Query:  MNKTLRRQNIQIKKLEKRA---VSKSQSRRAL-------CSLW-AEVAIIVFSPNDKVFCFGHHDVDVLLDRY
        + KTL R+ ++I K+ K +   V+ S+ +  L       C+L  A++A+IVFSP  KVF FGH +VDVLLD +
Subjt:  MNKTLRRQNIQIKKLEKRA---VSKSQSRRAL-------CSLW-AEVAIIVFSPNDKVFCFGHHDVDVLLDRY

Q4PSU4 Agamous-like MADS-box protein AGL614.0e-0533.03Show/hide
Query:  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKN--------LSPPKPAESYIPKKRAVEMIR
        Q IPM K  +  + Q+    KR     +    LC+L  AE+ IIVFSP  K F FGH  V+ +LDRY+++N             PA S     +   ++ 
Subjt:  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKN--------LSPPKPAESYIPKKRAVEMIR

Query:  AMEDSRKNG
         +E+ +K G
Subjt:  AMEDSRKNG

Q9FKK2 Agamous-like MADS-box protein AGL629.6e-0744Show/hide
Query:  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPP
        Q I M K     N+Q+    KR     +    LC+L  AEVAI+VFSP  KVF FGH +VD ++DR++  N  PP
Subjt:  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPP

Arabidopsis top hitse value%identityAlignment
AT1G01530.1 AGAMOUS-like 287.8e-0440.91Show/hide
Query:  IPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSLW-AEVAIIVFSPNDKVFCFGHHDVDVLLDRYL
        I + K     N+Q+    KR     +    LC+L  AE+AIIVFSP+ K + FGH +V+ LLD  L
Subjt:  IPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSLW-AEVAIIVFSPNDKVFCFGHHDVDVLLDRYL

AT1G65360.1 AGAMOUS-like 232.4e-0542.47Show/hide
Query:  MNKTLRRQNIQIKKLEKRA---VSKSQSRRAL-------CSLW-AEVAIIVFSPNDKVFCFGHHDVDVLLDRY
        + KTL R+ ++I K+ K +   V+ S+ +  L       C+L  A++A+IVFSP  KVF FGH +VDVLLD +
Subjt:  MNKTLRRQNIQIKKLEKRA---VSKSQSRRAL-------CSLW-AEVAIIVFSPNDKVFCFGHHDVDVLLDRY

AT2G24840.1 AGAMOUS-like 612.9e-0633.03Show/hide
Query:  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKN--------LSPPKPAESYIPKKRAVEMIR
        Q IPM K  +  + Q+    KR     +    LC+L  AE+ IIVFSP  K F FGH  V+ +LDRY+++N             PA S     +   ++ 
Subjt:  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKN--------LSPPKPAESYIPKKRAVEMIR

Query:  AMEDSRKNG
         +E+ +K G
Subjt:  AMEDSRKNG

AT4G36590.1 MADS-box transcription factor family protein1.2e-0439.44Show/hide
Query:  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKN
        Q I M K     N+Q+    KR     +    LC+L  AE+ +IVFSP  KVF FGH  V  L+ R+   N
Subjt:  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKN

AT5G60440.1 AGAMOUS-like 626.8e-0844Show/hide
Query:  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPP
        Q I M K     N+Q+    KR     +    LC+L  AEVAI+VFSP  KVF FGH +VD ++DR++  N  PP
Subjt:  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAATTACAGACCATTCCCATGAACAAAACTCTCCGCCGTCAAAATATACAAATCAAAAAGTTGGAGAAAAGAGCAGTAAGCAAGTCACAAAGTCGGCGAGCTCT
CTGTTCTTTATGGGCAGAGGTAGCCATTATAGTCTTCTCTCCTAATGATAAGGTTTTTTGTTTCGGTCATCACGATGTTGATGTGCTTTTAGATCGTTATCTCACAAAAA
ATTTGTCGCCGCCGAAGCCAGCGGAGAGTTACATTCCTAAGAAACGAGCGGTGGAAATGATTCGCGCGATGGAGGATTCGAGAAAGAACGGCGGATTTTGGTTGCAGGAG
GCGGAGTTCCAATCGGCATTGATGGATTTAAGAGCCAAAGTGGCGGAGAGAATTGAGAAATGGACGGAAAATTTTATAAAAATTGGAGTGTTGCCAGCGCTACGACCGCC
GCCGCAGCCGATGACGTCGTCGTGGTTTCACCTTTCTGGAAACCACCAACAATTGGCTCCTCCGACCGCGTTTCATCTCGCCAAAAACTACGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAATTACAGACCATTCCCATGAACAAAACTCTCCGCCGTCAAAATATACAAATCAAAAAGTTGGAGAAAAGAGCAGTAAGCAAGTCACAAAGTCGGCGAGCTCT
CTGTTCTTTATGGGCAGAGGTAGCCATTATAGTCTTCTCTCCTAATGATAAGGTTTTTTGTTTCGGTCATCACGATGTTGATGTGCTTTTAGATCGTTATCTCACAAAAA
ATTTGTCGCCGCCGAAGCCAGCGGAGAGTTACATTCCTAAGAAACGAGCGGTGGAAATGATTCGCGCGATGGAGGATTCGAGAAAGAACGGCGGATTTTGGTTGCAGGAG
GCGGAGTTCCAATCGGCATTGATGGATTTAAGAGCCAAAGTGGCGGAGAGAATTGAGAAATGGACGGAAAATTTTATAAAAATTGGAGTGTTGCCAGCGCTACGACCGCC
GCCGCAGCCGATGACGTCGTCGTGGTTTCACCTTTCTGGAAACCACCAACAATTGGCTCCTCCGACCGCGTTTCATCTCGCCAAAAACTACGGTTAG
Protein sequenceShow/hide protein sequence
MEKLQTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSLWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIPKKRAVEMIRAMEDSRKNGGFWLQE
AEFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPMTSSWFHLSGNHQQLAPPTAFHLAKNYG