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PI0008413 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008413
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUbiquitin family protein
Genome locationchr06:25792639..25792866
RNA-Seq ExpressionPI0008413
SyntenyPI0008413
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0000151 - ubiquitin ligase complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0031386 - protein tag (molecular function)
GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019954 - Ubiquitin conserved site
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025488.1 putative ubiquitin C variant 1 [Cucumis melo var. makuwa]1.4e-2070.27Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGG
        MFVRTF GE+ +L+VEPT TIADVKDQ+E    VPSDSQRL+F GKT EDHK LEHY I+ DS+LYLI R++GG
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGG
OHS99104.1 Polyubiquitin-B [Tritrichomonas foetus]8.7e-1556Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VEPT  I DVK +I+D++ +P D QRL+FAGK  ED  TL+ Y IQ DS+L+L+LRL GGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
XP_001311351.1 polyubiquitin [Trichomonas vaginalis G3]8.7e-1556Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VEPT  I DVK +I+D++ +P D QRL+FAGK  ED  TL+ Y IQ DS+L+L+LRL GGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
XP_001315099.1 polyubiquitin [Trichomonas vaginalis G3]8.7e-1556Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VEPT  I DVK +I+D++ +P D QRL+FAGK  ED  TL+ Y IQ DS+L+L+LRL GGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
XP_001318810.1 polyubiquitin [Trichomonas vaginalis G3]8.7e-1556Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VEPT  I DVK +I+D++ +P D QRL+FAGK  ED  TL+ Y IQ DS+L+L+LRL GGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
TrEMBL top hitse value%identityAlignment
A0A0A0L550 Ubiquitin-like domain-containing protein3.9e-2172Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        MFVRTFAGE  NL++EPTATI DVKDQIED   V S SQRL+F  KT ED KTLEHY+I+ DS+LYLI R HGGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
A0A1J4KLU0 Polyubiquitin4.2e-1556Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VEPT  I DVK +I+D++ +P D QRL+FAGK  ED  TL+ Y IQ DS+L+L+LRL GGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
A0A5D3BMG6 Putative ubiquitin C variant 16.7e-2170.27Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGG
        MFVRTF GE+ +L+VEPT TIADVKDQ+E    VPSDSQRL+F GKT EDHK LEHY I+ DS+LYLI R++GG
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGG
A0A7S3NK52 Hypothetical protein2.5e-1556.76Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGG
        +FV+T  G+ I LDVEP+ATI DVK +I+D++ +P D QRL+FAGK  ED +TL  Y IQ +S+L+L+LRL GG
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGG
A2DUU0 Polyubiquitin, putative4.2e-1556Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VEPT  I DVK +I+D++ +P D QRL+FAGK  ED  TL+ Y IQ DS+L+L+LRL GGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
SwissProt top hitse value%identityAlignment
P0CG49 Polyubiquitin-B2.1e-1652Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VEP+ TI +VK +I+D++ +P D QRL+FAGK  ED +TL  Y IQ +S+L+L+LRL GG+
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
P0CG51 Polyubiquitin-B2.1e-1652Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VEP+ TI +VK +I+D++ +P D QRL+FAGK  ED +TL  Y IQ +S+L+L+LRL GG+
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
P0CG62 Polyubiquitin-B2.1e-1652Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VEP+ TI +VK +I+D++ +P D QRL+FAGK  ED +TL  Y IQ +S+L+L+LRL GG+
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
P0CG68 Polyubiquitin-C9.6e-1753.33Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VEP+ TI +VK +I+D++ +P D QRL+FAGK  ED +TL  Y IQ +S+L+L+LRL GGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
P46575 Ubiquitin-60S ribosomal protein L401.6e-1654.05Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGG
        +FV+T  G+ I LDVEP+ TI +VK +I+D++ +P D QRL+FAGK  ED +TL  Y IQ +S+L+L+LRL GG
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGG
Arabidopsis top hitse value%identityAlignment
AT4G02890.1 Ubiquitin family protein9.9e-1752Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VE + TI +VK +I+D++ +P D QRL+FAGK  ED +TL  Y IQ +S+L+L+LRL GGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
AT4G05050.1 ubiquitin 119.9e-1752Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VE + TI +VK +I+D++ +P D QRL+FAGK  ED +TL  Y IQ +S+L+L+LRL GGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
AT4G05320.2 polyubiquitin 109.9e-1752Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VE + TI +VK +I+D++ +P D QRL+FAGK  ED +TL  Y IQ +S+L+L+LRL GGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
AT4G05320.3 polyubiquitin 109.9e-1752Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VE + TI +VK +I+D++ +P D QRL+FAGK  ED +TL  Y IQ +S+L+L+LRL GGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
AT4G05320.4 polyubiquitin 109.9e-1752Show/hide
Query:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF
        +FV+T  G+ I L+VE + TI +VK +I+D++ +P D QRL+FAGK  ED +TL  Y IQ +S+L+L+LRL GGF
Subjt:  MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTGAGGACGTTTGCCGGGGAGAGAATTAATTTAGATGTTGAACCAACGGCTACAATTGCGGATGTGAAGGATCAAATCGAAGATCGCAAAAGAGTACCCTCTGA
TTCTCAAAGGCTAGTTTTTGCTGGAAAGACTGCTGAAGATCATAAGACTCTTGAACATTATAAGATTCAGATTGATTCTTCATTGTATTTGATTTTACGTCTTCATGGTG
GCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTGAGGACGTTTGCCGGGGAGAGAATTAATTTAGATGTTGAACCAACGGCTACAATTGCGGATGTGAAGGATCAAATCGAAGATCGCAAAAGAGTACCCTCTGA
TTCTCAAAGGCTAGTTTTTGCTGGAAAGACTGCTGAAGATCATAAGACTCTTGAACATTATAAGATTCAGATTGATTCTTCATTGTATTTGATTTTACGTCTTCATGGTG
GCTTTTAA
Protein sequenceShow/hide protein sequence
MFVRTFAGERINLDVEPTATIADVKDQIEDRKRVPSDSQRLVFAGKTAEDHKTLEHYKIQIDSSLYLILRLHGGF