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PI0008415 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008415
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr03:9528656..9529972
RNA-Seq ExpressionPI0008415
SyntenyPI0008415
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]1.4e-4774.66Show/hide
Query:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +ST SKG R SSS N  PSPMSA QY MDLGFT VTRS++R   I I SPTESSTPPRPS NLIRPSGG+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNE
        PTTYSQAV  +KRF+PRPEIK+YFQK + +YDPIIEPEYQSLTL E
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNE

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]3.4e-4974.17Show/hide
Query:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +ST SKG+R  SS N APSP+SADQYAMDLGFTTVTR  +RSF I I SPTESSTPPRPS NLIRPS G+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATI
        PTTYSQAV P+KRF+PRPEIK+YFQK + +YDPIIE EYQSLT  ET + I
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATI

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]4.9e-4856.58Show/hide
Query:  RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTPPTTYSQAV
        RGR +ST SKG+R SSS N  PSPMSADQYAMDLGFTTVTRS++RS  IRI SPTESSTPP+PS NLIRPSGG+ QMR P SP SN +SSTPPTTYSQAV
Subjt:  RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLSTAVNASSS
         P+KR                                                                  SKLLA LAQATTDADFQRLLST VNASSS
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLSTAVNASSS

Query:  SKSASSSIQEDEELASPEYDLNDPFLDS
        SKS SSSIQEDEE    EYDL+DP+LDS
Subjt:  SKSASSSIQEDEELASPEYDLNDPFLDS

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]1.2e-4954.24Show/hide
Query:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +ST SKG+  SSS N APSP  ADQYAM++GFTTVTRS++RS +IRI S TES+TPPRPS NLI PS G+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLS
         TTYSQAV P+KRF+PRPEIK+YFQK + +YDPIIE EYQ                                                            
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLS

Query:  TAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDS
          +NASSSSKS SSSIQEDEE   PEYDL+DPFLDS
Subjt:  TAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDS

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]6.9e-6665.55Show/hide
Query:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +ST SKG+  SSS N APSPMS DQYAMDLG+TTV +S+++S  I I SP ESSTPPRPS NLI P G + QMR  ASP SN ESST 
Subjt:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLS
        PTTYSQAV P+K+F+PR EIK+YFQK + IYDPIIE EYQ                   +NG LQDIDQ+KNA+FLNDK K LA L QAT DADFQRLLS
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLS

Query:  TAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDSQP
        TAVN SSSSK A S IQEDEE    EYDL+DPFLDSQP
Subjt:  TAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.7e-4974.17Show/hide
Query:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +ST SKG+R  SS N APSP+SADQYAMDLGFTTVTR  +RSF I I SPTESSTPPRPS NLIRPS G+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATI
        PTTYSQAV P+KRF+PRPEIK+YFQK + +YDPIIE EYQSLT  ET + I
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATI

A0A5A7U8A0 Uncharacterized protein2.4e-4856.58Show/hide
Query:  RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTPPTTYSQAV
        RGR +ST SKG+R SSS N  PSPMSADQYAMDLGFTTVTRS++RS  IRI SPTESSTPP+PS NLIRPSGG+ QMR P SP SN +SSTPPTTYSQAV
Subjt:  RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLSTAVNASSS
         P+KR                                                                  SKLLA LAQATTDADFQRLLST VNASSS
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLSTAVNASSS

Query:  SKSASSSIQEDEELASPEYDLNDPFLDS
        SKS SSSIQEDEE    EYDL+DP+LDS
Subjt:  SKSASSSIQEDEELASPEYDLNDPFLDS

A0A5D3BI61 Uncharacterized protein3.3e-6665.55Show/hide
Query:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +ST SKG+  SSS N APSPMS DQYAMDLG+TTV +S+++S  I I SP ESSTPPRPS NLI P G + QMR  ASP SN ESST 
Subjt:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLS
        PTTYSQAV P+K+F+PR EIK+YFQK + IYDPIIE EYQ                   +NG LQDIDQ+KNA+FLNDK K LA L QAT DADFQRLLS
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLS

Query:  TAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDSQP
        TAVN SSSSK A S IQEDEE    EYDL+DPFLDSQP
Subjt:  TAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDSQP

A0A5D3BPD3 Uncharacterized protein5.7e-5054.24Show/hide
Query:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +ST SKG+  SSS N APSP  ADQYAM++GFTTVTRS++RS +IRI S TES+TPPRPS NLI PS G+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLS
         TTYSQAV P+KRF+PRPEIK+YFQK + +YDPIIE EYQ                                                            
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLS

Query:  TAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDS
          +NASSSSKS SSSIQEDEE   PEYDL+DPFLDS
Subjt:  TAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDS

E5GCE6 Uncharacterized protein7.0e-4874.66Show/hide
Query:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +ST SKG R SSS N  PSPMSA QY MDLGFT VTRS++R   I I SPTESSTPPRPS NLIRPSGG+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNE
        PTTYSQAV  +KRF+PRPEIK+YFQK + +YDPIIEPEYQSLTL E
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTATTCAAAGGGCAGTCGCCTATCTTCTTCTCAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGATTTACTACGGTAACCCGATCTAAAGCAAGATCGTTCGACATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTA
TCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTGTCGAATTTGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTCTCAATGAGACACATGC
CACCATTAAACACATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAATGCAGAGTTCTTGAACGATAAATCAAAACTTCTTGCAACAC
TGGCACAGGCAACAACTGATGCTGATTTTCAAAGATTATTATCAACGGCAGTAAATGCCTCTTCAAGCTCAAAATCAGCATCTTCCTCCATACAGGAAGATGAAGAATTG
GCAAGTCCAGAATACGATCTAAACGATCCATTTCTCGACTCACAGCCCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTATTCAAAGGGCAGTCGCCTATCTTCTTCTCAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGATTTACTACGGTAACCCGATCTAAAGCAAGATCGTTCGACATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTA
TCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTGTCGAATTTGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTCTCAATGAGACACATGC
CACCATTAAACACATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAATGCAGAGTTCTTGAACGATAAATCAAAACTTCTTGCAACAC
TGGCACAGGCAACAACTGATGCTGATTTTCAAAGATTATTATCAACGGCAGTAAATGCCTCTTCAAGCTCAAAATCAGCATCTTCCTCCATACAGGAAGATGAAGAATTG
GCAAGTCCAGAATACGATCTAAACGATCCATTTCTCGACTCACAGCCCATGTGA
Protein sequenceShow/hide protein sequence
MSSVRGRGRVSSTYSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSFDIRIESPTESSTPPRPSANLIRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEK
RFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLNETHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLATLAQATTDADFQRLLSTAVNASSSSKSASSSIQEDEEL
ASPEYDLNDPFLDSQPM