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PI0008450 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008450
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr03:14266125..14266947
RNA-Seq ExpressionPI0008450
SyntenyPI0008450
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.6e-1952.8Show/hide
Query:  DAWRTCS--------------DIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHR
        D WRT S              DI   +E   W +  I   R+  T     +   RSNN RL DVADDPQQVL+I N+N+RYMEE H M+D+ IVP  VHR
Subjt:  DAWRTCS--------------DIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHR

Query:  GRARVEEAELDDEVYHNVEEVPLMT
        GR RVEEAEL DEVYHNVEEVP  T
Subjt:  GRARVEEAELDDEVYHNVEEVPLMT

KAA0064192.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.0e-1976.39Show/hide
Query:  ARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHRGRARVEEAELDDEVYHNVEEVPLMT
        +RSNN RL DVA+DPQQVLDI N+NERYMEE H M+D+PIVP L HRG  RVEE EL DEVYHNVEEVP MT
Subjt:  ARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHRGRARVEEAELDDEVYHNVEEVPLMT

KAA0064245.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.6e-2360.36Show/hide
Query:  DAWRTCSDIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHRGRARVEEAELDDEV
        D WRT S ++       W  P    DR+ R         +RSNN RL DVADDPQQVLDI N+NERYMEE H M+D+PIVPL +HRGR RVEEAEL DEV
Subjt:  DAWRTCSDIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHRGRARVEEAELDDEV

Query:  YHNVEEVPLMT
        YHNVEEVP  T
Subjt:  YHNVEEVPLMT

TYK02837.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.0e-1975Show/hide
Query:  ARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHRGRARVEEAELDDEVYHNVEEVPLMT
        +RSNN RL DVA+DPQQVLDI N+NERYMEE H M+D+PIVP L HRG  RVEE EL DEVYHNVEEVP  T
Subjt:  ARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHRGRARVEEAELDDEVYHNVEEVPLMT

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.0e-1952.8Show/hide
Query:  DAWRTCS--------------DIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHR
        D WRT S              DI   +E   W +  I   R+  T     +   RSNN RL DVADDPQQVL+I N+N+RYMEE H M+D+ IVP  VHR
Subjt:  DAWRTCS--------------DIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHR

Query:  GRARVEEAELDDEVYHNVEEVPLMT
        GR RVEEAEL DEVYHNVEEVP  T
Subjt:  GRARVEEAELDDEVYHNVEEVPLMT

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.2e-1952.8Show/hide
Query:  DAWRTCS--------------DIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHR
        D WRT S              DI   +E   W +  I   R+  T     +   RSNN RL DVADDPQQVL+I N+N+RYMEE H M+D+ IVP  VHR
Subjt:  DAWRTCS--------------DIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHR

Query:  GRARVEEAELDDEVYHNVEEVPLMT
        GR RVEEAEL DEVYHNVEEVP  T
Subjt:  GRARVEEAELDDEVYHNVEEVPLMT

A0A5A7V745 Serine/threonine-protein phosphatase 7 long form-like protein4.9e-2076.39Show/hide
Query:  ARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHRGRARVEEAELDDEVYHNVEEVPLMT
        +RSNN RL DVA+DPQQVLDI N+NERYMEE H M+D+PIVP L HRG  RVEE EL DEVYHNVEEVP MT
Subjt:  ARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHRGRARVEEAELDDEVYHNVEEVPLMT

A0A5A7VEC1 GATA zinc finger domain-containing protein 10-like isoform X21.2e-2360.36Show/hide
Query:  DAWRTCSDIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHRGRARVEEAELDDEV
        D WRT S ++       W  P    DR+ R         +RSNN RL DVADDPQQVLDI N+NERYMEE H M+D+PIVPL +HRGR RVEEAEL DEV
Subjt:  DAWRTCSDIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHRGRARVEEAELDDEV

Query:  YHNVEEVPLMT
        YHNVEEVP  T
Subjt:  YHNVEEVPLMT

A0A5D3BTN9 Serine/threonine-protein phosphatase 7 long form-like protein2.4e-1975Show/hide
Query:  ARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHRGRARVEEAELDDEVYHNVEEVPLMT
        +RSNN RL DVA+DPQQVLDI N+NERYMEE H M+D+PIVP L HRG  RVEE EL DEVYHNVEEVP  T
Subjt:  ARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHRGRARVEEAELDDEVYHNVEEVPLMT

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.4e-1952.8Show/hide
Query:  DAWRTCS--------------DIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHR
        D WRT S              DI   +E   W +  I   R+  T     +   RSNN RL DVADDPQQVL+I N+N+RYMEE H M+D+ IVP  VHR
Subjt:  DAWRTCS--------------DIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHDVPIVPLLVHR

Query:  GRARVEEAELDDEVYHNVEEVPLMT
        GR RVEEAEL DEVYHNVEEVP  T
Subjt:  GRARVEEAELDDEVYHNVEEVPLMT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCATGGAACTAACTGCACAGACTGGTTGAAAAAGAGGATCTGGGACAAGTCTAGAAGACAACAGTCGAAATGGAGCACTGACGCGCTCCTACGCACTGACGCGTG
GAGGACGTGCAGTGATATTGTGACGGCGCGTGAAGCTCACTCGTGGGGTTTTCCGACGATCGATGATGACAGGATGCAGCGAACAGTGGTGGCGCTTCTCATGAGCCAGG
CGAGATCGAACAACATTAGGCTACATGATGTTGCAGATGATCCACAACAAGTTCTTGATATATCCAATAGTAATGAGAGGTACATGGAGGAGCAACATTATATGCACGAT
GTACCTATTGTACCTCTACTAGTTCATAGGGGACGTGCTCGAGTGGAAGAAGCTGAACTCGATGATGAAGTTTACCATAATGTGGAAGAAGTGCCTCTTATGACATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCATGGAACTAACTGCACAGACTGGTTGAAAAAGAGGATCTGGGACAAGTCTAGAAGACAACAGTCGAAATGGAGCACTGACGCGCTCCTACGCACTGACGCGTG
GAGGACGTGCAGTGATATTGTGACGGCGCGTGAAGCTCACTCGTGGGGTTTTCCGACGATCGATGATGACAGGATGCAGCGAACAGTGGTGGCGCTTCTCATGAGCCAGG
CGAGATCGAACAACATTAGGCTACATGATGTTGCAGATGATCCACAACAAGTTCTTGATATATCCAATAGTAATGAGAGGTACATGGAGGAGCAACATTATATGCACGAT
GTACCTATTGTACCTCTACTAGTTCATAGGGGACGTGCTCGAGTGGAAGAAGCTGAACTCGATGATGAAGTTTACCATAATGTGGAAGAAGTGCCTCTTATGACATAG
Protein sequenceShow/hide protein sequence
MFHGTNCTDWLKKRIWDKSRRQQSKWSTDALLRTDAWRTCSDIVTAREAHSWGFPTIDDDRMQRTVVALLMSQARSNNIRLHDVADDPQQVLDISNSNERYMEEQHYMHD
VPIVPLLVHRGRARVEEAELDDEVYHNVEEVPLMT