CuGenDBv2

Gene ID	PI0008478
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	50S ribosomal protein L35
Genome location	chr04:16602488..16608866
RNA-Seq Expression	PI0008478
Synteny	PI0008478
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR021137 - Ribosomal protein L35 IPR037229 - Ribosomal protein L35 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144409.1 uncharacterized protein LOC101219338 [Cucumis sativus]

1.1e-78

95.83

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Query:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLR CAKLRSAAAKPSQI+NSVSS+RRIFHSAPSLYQPLHFS +NLNSRSLFNA QQTHSPLAAYQCIRSS LPLSVVQVRHVSSRDRRNKRKPTTPATS
Subjt:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

XP_008460439.1 PREDICTED: uncharacterized protein LOC103499252 [Cucumis melo]

6.5e-79

95.83

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Query:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLRWCAKLRSAAAKPSQIV SVSS+RRIFHSAPSLYQPLHFSP+NLNSRSLFNA  QTHSPLAAYQCIRSS+LPLSVVQVRHVSSRDRRNKRKPTTPATS
Subjt:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC+
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

XP_022156090.1 uncharacterized protein LOC111023059 [Momordica charantia]

7.2e-70

84.43

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Query:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLRWCAKLRSAAAKPSQ+V+SVSS+RRIFHS+PSLYQPLHF+P+NL+SRS+FNA  QTHS LAAYQCIRSS LPLSVVQVRHVSSR+RR +RKP TP TS
Subjt:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC
        KLKKTK+K YSSYKSRFW+MKDGSIKRR EGKRHNAH KSK+SKR+LR+PA VPLAYAKVMKKLNFC
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC

XP_023532529.1 uncharacterized protein LOC111794661 [Cucurbita pepo subsp. pepo]

3.4e-67

82.04

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Query:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLRWC+KLRSAAAKPSQIV+SVSS+RRIFHSAPSLYQPLHFSP+NL+SRSL NA  QTHS LAAYQCIRSS+ PL  VQVRHVSSR+R+ +RKP TP TS
Subjt:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC
        KLKKTK+K YSSYKSRFW+ KDGSIKRR EGKRHNAH KSK++KR+LR+PA VPLAYAKVMKKLNFC
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC

XP_038887770.1 uncharacterized protein LOC120077803 [Benincasa hispida]

1.5e-75

91.62

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Query:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLRWCAKLRSAAAKPSQIVNS SS+RRIFHS+ SLYQPLHFSP+NLNSRSLFNA QQTHSPLAAYQCIRSS+LPLSVVQVRHVSSRDRR KRK TTP TS
Subjt:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC
        KLKKTKLK YSSYKSRFW+MKDGSIKRRMEGKRHNAHSKSKRSKR+LR+PAIVPLAYAKVMKKLNFC
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBT5 Uncharacterized protein

5.4e-79

95.83

Show/hide

Query:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLR CAKLRSAAAKPSQI+NSVSS+RRIFHSAPSLYQPLHFS +NLNSRSLFNA QQTHSPLAAYQCIRSS LPLSVVQVRHVSSRDRRNKRKPTTPATS
Subjt:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

A0A1S3CDR4 uncharacterized protein LOC103499252

3.2e-79

95.83

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Query:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLRWCAKLRSAAAKPSQIV SVSS+RRIFHSAPSLYQPLHFSP+NLNSRSLFNA  QTHSPLAAYQCIRSS+LPLSVVQVRHVSSRDRRNKRKPTTPATS
Subjt:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC+
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

A0A6J1DPB8 uncharacterized protein LOC111023059

3.5e-70

84.43

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Query:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLRWCAKLRSAAAKPSQ+V+SVSS+RRIFHS+PSLYQPLHF+P+NL+SRS+FNA  QTHS LAAYQCIRSS LPLSVVQVRHVSSR+RR +RKP TP TS
Subjt:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC
        KLKKTK+K YSSYKSRFW+MKDGSIKRR EGKRHNAH KSK+SKR+LR+PA VPLAYAKVMKKLNFC
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC

A0A6J1ESK5 uncharacterized protein LOC111437349

4.7e-67

81.44

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Query:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLRWC+KLRSAAAKPSQIV+SVSS+RRIFHSAPSLYQPLHFSP+NL+SRSL NA  QTHS LAAYQCIRSS+ PL  VQVRHVSSR+R+ +RKP TP TS
Subjt:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC
        KLKKTK+K YSSYKSRFW+ KDGSIKRR EGKRHNAH KSK++KR+LR+P  VPLAYAKVMKKLNFC
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC

A0A6J1KAA4 uncharacterized protein LOC111491530

8.1e-67

81.44

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Query:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS
        MLRWC+KLRSAAAKPSQIV+SVSS+RRIFHS PSLYQPLHFSP+NL+SRSL NA  QTHS LAAYQCIRSS+ PL  VQVRHVSSR+R+ +RKP TP TS
Subjt:  MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATS

Query:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC
        KLKKTK+K YSSYKSRFW+ KDGSIKRR EGKRHNAH KSK++KR+LR+PA VPLAYAKVMKKLNFC
Subjt:  KLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G45590.1 Ribosomal protein L35

8.9e-26

42.13

Show/hide

Query:  MLRWCAKLRSAAAKPSQIVNSVSSS-RRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAA-----YQCIRSSVLPLSVVQVRHVSSRDR----RN
        M R+C KLRS + + ++ ++   +S  R+ H +PS     H + + L      N+ + +  P A         + ++ +P   VQVR+++S+++    + 
Subjt:  MLRWCAKLRSAAAKPSQIVNSVSSS-RRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAA-----YQCIRSSVLPLSVVQVRHVSSRDR----RN

Query:  KRKPTTPATSKLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS
        K +P TP TSK+KK K+K YSS+K RF  + DG+I+R  EGKRHNAH KSK+SKR+LR+P +VP AYAKVMKKLNFC+
Subjt:  KRKPTTPATSKLKKTKLKAYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTCAGGTGGTGTGCCAAGCTCCGATCTGCGGCGGCGAAGCCATCTCAAATTGTAAATTCCGTTTCTTCCAGCCGCAGGATCTTTCACTCTGCTCCATCACTATACCA
GCCCCTCCATTTCTCTCCGAGTAATTTGAATTCCAGGTCCCTTTTCAATGCATTTCAACAGACTCATTCTCCGCTCGCCGCTTACCAGTGTATTCGCTCTTCGGTCTTGC
CTCTCTCTGTTGTTCAAGTGCGGCATGTTTCATCAAGAGACCGACGGAATAAGAGAAAGCCAACGACGCCAGCCACTTCCAAATTGAAGAAAACTAAACTGAAAGCTTAC
TCGTCTTACAAGTCTAGGTTTTGGTTGATGAAGGATGGGAGCATTAAACGTCGAATGGAAGGGAAAAGGCACAATGCACATTCCAAGTCTAAAAGATCAAAGCGGAAACT
GAGAAAACCTGCCATTGTCCCGTTAGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGCAGTTAG

mRNA sequence

Show/hide mRNA sequence

CAACAATTTGCCAAATCATAGGTTTCTCTCTCTGAAAATTTTCCTTCGCCCTTGGAGTACGACGGCGACGACGATGCTCAGGTGGTGTGCCAAGCTCCGATCTGCGGCGG
CGAAGCCATCTCAAATTGTAAATTCCGTTTCTTCCAGCCGCAGGATCTTTCACTCTGCTCCATCACTATACCAGCCCCTCCATTTCTCTCCGAGTAATTTGAATTCCAGG
TCCCTTTTCAATGCATTTCAACAGACTCATTCTCCGCTCGCCGCTTACCAGTGTATTCGCTCTTCGGTCTTGCCTCTCTCTGTTGTTCAAGTGCGGCATGTTTCATCAAG
AGACCGACGGAATAAGAGAAAGCCAACGACGCCAGCCACTTCCAAATTGAAGAAAACTAAACTGAAAGCTTACTCGTCTTACAAGTCTAGGTTTTGGTTGATGAAGGATG
GGAGCATTAAACGTCGAATGGAAGGGAAAAGGCACAATGCACATTCCAAGTCTAAAAGATCAAAGCGGAAACTGAGAAAACCTGCCATTGTCCCGTTAGCTTATGCCAAG
GTAATGAAGAAGCTCAACTTTTGCAGTTAGGTTATTTGGTTTATTCCTTCTCTTGTACTATGCCAAGGATTGAACGAGCTTCAACATCACCATTCAACTGCTTCTTCTTT
TTCCTTTTTTGGATTTAGAATTCAAAGCTCTTAGAACAAACTAAGATGGAGAATAATTATTTCTTCGTTATATGAAGTTGATTGTGTAGAAATTGTTGTGATTTCAAATA
GAAGTTATCTTTCTATTTTCATCAAGTGTGAATTTTAGGGGTTGTTATGGGAGCTGAAGGGGTATTGGAATGTGCGAGTAATCAGGACATAATAGAAATGGAATTGTAAA
ACATGAAAATTAGAAAAAGTAGTTAATAAAAATGTTTTTGTTTTT

Protein sequence

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MLRWCAKLRSAAAKPSQIVNSVSSSRRIFHSAPSLYQPLHFSPSNLNSRSLFNAFQQTHSPLAAYQCIRSSVLPLSVVQVRHVSSRDRRNKRKPTTPATSKLKKTKLKAY
SSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS

PI0008478 (gene) of Melon (PI 482460) v1 genome