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PI0008479 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008479
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr01:11327416..11327580
RNA-Seq ExpressionPI0008479
SyntenyPI0008479
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037721.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.1e-1581.13Show/hide
Query:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRN
        MTNSEI D+LDEGDSTY TTGGD+I+YIE SNEWS+WRDQLA TMFSD ELR+
Subjt:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRN

KAA0043564.1 retrotransposon protein [Cucumis melo var. makuwa]8.1e-1583.33Show/hide
Query:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ
        MTNSEI DDLDEGDSTYATTGGD+I+YIE SNEWS+ RDQLA TMFSD ELR+Q
Subjt:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-1583.33Show/hide
Query:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ
        MTNSEI DDLDEGDSTYATTGGD+I+YIE SNEWS+WRDQLA TMFSD EL+ Q
Subjt:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ

KAA0063753.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]6.2e-1581.48Show/hide
Query:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ
        MTNSEI DDLDE DSTYATTGGD+I+YIE SNEWS+WRDQLA TMFSD EL +Q
Subjt:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ

TYK19779.1 retrotransposon protein [Cucumis melo var. makuwa]8.1e-1583.33Show/hide
Query:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ
        MTNSEI DDLDEGDSTYATTGGD+I+YIE SNEWS+ RDQLA TMFSD ELR+Q
Subjt:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7T808 Putative nuclease HARBI11.0e-1581.13Show/hide
Query:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRN
        MTNSEI D+LDEGDSTY TTGGD+I+YIE SNEWS+WRDQLA TMFSD ELR+
Subjt:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRN

A0A5A7TJS2 Retrotransposon protein3.9e-1583.33Show/hide
Query:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ
        MTNSEI DDLDEGDSTYATTGGD+I+YIE SNEWS+ RDQLA TMFSD ELR+Q
Subjt:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ

A0A5A7V6M3 Putative nuclease HARBI13.0e-1581.48Show/hide
Query:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ
        MTNSEI DDLDE DSTYATTGGD+I+YIE SNEWS+WRDQLA TMFSD EL +Q
Subjt:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ

A0A5D3D8J6 Retrotransposon protein3.9e-1583.33Show/hide
Query:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ
        MTNSEI DDLDEGDSTYATTGGD+I+YIE SNEWS+ RDQLA TMFSD ELR+Q
Subjt:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ

A0A5D3DG22 Retrotransposon protein7.9e-1683.33Show/hide
Query:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ
        MTNSEI DDLDEGDSTYATTGGD+I+YIE SNEWS+WRDQLA TMFSD EL+ Q
Subjt:  MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAACAGTGAAATAAACGACGATTTGGACGAAGGTGATTCGACCTACGCTACAACGGGAGGTGACGATATTAGTTATATTGAGACTTCAAACGAATGGAGTCAATG
GAGGGATCAATTGGCTGAGACGATGTTCAGTGATTGTGAGTTACGTAACCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAACAGTGAAATAAACGACGATTTGGACGAAGGTGATTCGACCTACGCTACAACGGGAGGTGACGATATTAGTTATATTGAGACTTCAAACGAATGGAGTCAATG
GAGGGATCAATTGGCTGAGACGATGTTCAGTGATTGTGAGTTACGTAACCAGTAG
Protein sequenceShow/hide protein sequence
MTNSEINDDLDEGDSTYATTGGDDISYIETSNEWSQWRDQLAETMFSDCELRNQ