CuGenDBv2

Gene ID	PI0008481
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	rhodocoxin
Genome location	chr01:22865067..22866772
RNA-Seq Expression	PI0008481
Synteny	PI0008481
Gene Ontology terms	GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domains	IPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain IPR012675 - Beta-grasp domain superfamily IPR036010 - 2Fe-2S ferredoxin-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8646282.1 hypothetical protein Csa_016221 [Cucumis sativus]

2.4e-70

89.31

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Query:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC
        MAVANLHRLRQIHRLPAI YSKTIFSRWSASATTSLE SSSSSKKVSDRTIKL  YD EGTKKEIVGLTGQTLLKALANRGLIDPDSHRLE IDACSAEC
Subjt:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC

Query:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEGWRLEWLVFK
        EV IAQDWI+KLPPRSYDEEYVLKRNSRARTLNK+SRLGCQVILTPDLE     W ++K
Subjt:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEGWRLEWLVFK

KAG6576046.1 Ferredoxin-2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

4.7e-66

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Query:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC
        MAVANLHRLRQIHRLPAI  SK+IFSRWSASA  S ESSSSSSKKVSDR +KL   DPEGTKKE+VGLTGQTLLKALANRGLIDPDSHRLE+IDACSAEC
Subjt:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC

Query:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
        EV+IAQ+W++KLPPRSYDEEYVLKRNSR R LNKHSRLGCQVILTP+L+G
Subjt:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

XP_004148948.1 uncharacterized protein LOC101218877 [Cucumis sativus]

1.4e-70

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Query:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC
        MAVANLHRLRQIHRLPAI YSKTIFSRWSASATTSLE SSSSSKKVSDRTIKL  YD EGTKKEIVGLTGQTLLKALANRGLIDPDSHRLE IDACSAEC
Subjt:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC

Query:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
        EV IAQDWI+KLPPRSYDEEYVLKRNSRARTLNK+SRLGCQVILTPDLEG
Subjt:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

XP_008451222.1 PREDICTED: rhodocoxin [Cucumis melo]

2.4e-70

92.67

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Query:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC
        MAVANLHRLRQIHRLPAI YSKTIFSRWSASATTSLE SSSSSKKVSDR IKL  YDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLE+IDACSAEC
Subjt:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC

Query:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
        EV IAQDWIDKLPPRSYDEEY+LK+ SRARTLNK+SRLGCQVILTPDLEG
Subjt:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

XP_038896766.1 putidaredoxin [Benincasa hispida]

4.2e-67

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Query:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC
        M VA L RLRQI+R  AIG+SKTIFSRWSASATTSLESSSS+SKKVSDRT+KL   DPEGTKKE+VGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC
Subjt:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC

Query:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
        EV+IAQ+W+DKLPPRSYDEEYVLKRNSRAR LNKHSRLGCQVILTPDL+G
Subjt:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K8M3 Uncharacterized protein

6.8e-71

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Query:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC
        MAVANLHRLRQIHRLPAI YSKTIFSRWSASATTSLE SSSSSKKVSDRTIKL  YD EGTKKEIVGLTGQTLLKALANRGLIDPDSHRLE IDACSAEC
Subjt:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC

Query:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
        EV IAQDWI+KLPPRSYDEEYVLKRNSRARTLNK+SRLGCQVILTPDLEG
Subjt:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

A0A1S3BQZ7 rhodocoxin

1.2e-70

92.67

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Query:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC
        MAVANLHRLRQIHRLPAI YSKTIFSRWSASATTSLE SSSSSKKVSDR IKL  YDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLE+IDACSAEC
Subjt:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC

Query:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
        EV IAQDWIDKLPPRSYDEEY+LK+ SRARTLNK+SRLGCQVILTPDLEG
Subjt:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

A0A5A7UUN4 Rhodocoxin

1.2e-70

92.67

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Query:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC
        MAVANLHRLRQIHRLPAI YSKTIFSRWSASATTSLE SSSSSKKVSDR IKL  YDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLE+IDACSAEC
Subjt:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC

Query:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
        EV IAQDWIDKLPPRSYDEEY+LK+ SRARTLNK+SRLGCQVILTPDLEG
Subjt:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

A0A6J1GP07 uncharacterized protein LOC111456197

6.6e-66

85.33

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Query:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC
        MAV NLHRLRQIHRLPAI  SK+IFSRWSASA  S ESSSSSSKKVSDR +KL   DPEGTKKE+VGLTGQTLLKALANRGLIDPDSHRLE+IDACSAEC
Subjt:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC

Query:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
        EV+IAQ+W++KLPPRSYDEEYVLKRNSR R LNKHSRLGCQVILTP+L+G
Subjt:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

A0A6J1JU11 uncharacterized protein LOC111488356

1.9e-65

84.67

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Query:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC
        MAVANLHRLRQI RLPAI YSK+IFSRWSASA  S +SSSSSSKKVSDR +KL   DPEGTKKE+VGLTGQTLLKALANRGLIDPDSHRLE+IDACSAEC
Subjt:  MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAEC

Query:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
        EV+IAQ+W++KLPPRSYDEEYVLKR+SR R LNKHSRLGCQVILTP+L+G
Subjt:  EVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

SwissProt top hits

e value

%identity

Alignment

P37193 Adrenodoxin-like protein 1, mitochondrial

5.7e-06

30.43

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Query:  KVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAE-----CEVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLG
        K +D  + +   D +G + ++ G  G  +L  LA+R       H +E   AC A      C V +  D++ KL      E+ +L     A  L ++SRLG
Subjt:  KVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAE-----CEVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLG

Query:  CQVILTPDLEGWRLE
        CQ++L   +EG  LE
Subjt:  CQVILTPDLEGWRLE

Q05B51 Ferredoxin-2, mitochondrial

3.9e-07

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Query:  IKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAECEVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
        + ++  D  G +  + G  G  +L  LA R  +D +    E   ACS  C V +++D +D LPP    E+ +L     A  L ++SRLGCQ++LTP+LEG
Subjt:  IKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAECEVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

Q5FWQ0 Ferredoxin-2, mitochondrial

2.5e-06

32.52

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Query:  SASATTSLESSSSSSK-KVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAECEVNIAQDWIDKLPPRSYDEEYVLKRNS
        SA  T  +ES + + + ++S+ T++++  D  G +  + G  G+++L  LA+R  I+ +    E   ACS  C V +  ++  KLP     E+ +L    
Subjt:  SASATTSLESSSSSSK-KVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAECEVNIAQDWIDKLPPRSYDEEYVLKRNS

Query:  RARTLNKHSRLGCQVILTPDLEG
         A  L ++SRLGCQ+ILT  L G
Subjt:  RARTLNKHSRLGCQVILTPDLEG

Q6P4F2 Ferredoxin-2, mitochondrial

3.0e-07

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Query:  IKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAECEVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
        + ++  D  G +  + G  G  +L  LA R  +D +    E   ACS  C V +++D +D LPP    E+ +L     A  L ++SRLGCQ++LTP+LEG
Subjt:  IKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAECEVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

Q9CPW2 Ferredoxin-2, mitochondrial

1.6e-05

28.15

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Query:  PAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAECEVNIAQDWIDKLPPR
        P  G++      +  +        ++ S ++    + ++  D  G +  + G  G  +L  LA R  +D +    E   ACS  C V +++  +D LPP 
Subjt:  PAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAECEVNIAQDWIDKLPPR

Query:  SYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
           E+ +L     A  L ++SRLGCQ++LTP+LEG
Subjt:  SYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

Arabidopsis top hits

e value

%identity

Alignment

AT3G07480.1 2Fe-2S ferredoxin-like superfamily protein

3.7e-45

63.57

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Query:  QIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAECEVNIAQDWID
        QIHRL    +++++  R SA   TS  S S  SKKVSDR +KL   DP+G K++I+GL+GQTLL+AL + GLIDP SHRL+DI+ACSAECEV IA++W++
Subjt:  QIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAECEVNIAQDWID

Query:  KLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG
        KLPPR+YDEEYVLKR+SR+R LNKHSRLGCQV+LT +L+G
Subjt:  KLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEG

AT4G05450.1 mitochondrial ferredoxin 1

7.1e-04

29.22

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Query:  NLHRL--RQIHRLPAI-GYSKTIFSRWSASATTSLESSSSSSKKVSDRT--IKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAE
        NLHR     +  LP +   ++T    W   +     SS++SS+   + T  I ++  D +G +  +    G ++L+A A+   ID +    E   ACS  
Subjt:  NLHRL--RQIHRLPAI-GYSKTIFSRWSASATTSLESSSSSSKKVSDRT--IKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAE

Query:  CEVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEGWRL
          + +  ++ +KL   + +E  +L     A  L + SRLGCQVI  P+L+G RL
Subjt:  CEVNIAQDWIDKLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEGWRL

Sequences

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CDS sequence

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mRNA sequence

Show/hide mRNA sequence

ATGGCAGTCGCAAACCTACACAGGCTCCGCCAAATCCACCGTCTGCCGGCGATTGGCTACTCCAAGACCATTTTCTCAAGATGGTCGGCGTCGGCCACCACCTCGTTGGA
ATCCTCATCGTCATCATCCAAAAAGGTATCAGATCGCACCATCAAACTGCTCGTTTATGATCCGGAGGGCACAAAGAAAGAGATTGTCGGATTAACTGGCCAGACTCTTC
TGAAGGCGCTTGCCAATCGGGGCCTGATCGACCCGGATTCTCATCGATTGGAAGACATCGACGCCTGTTCGGCGGAATGCGAGGTCAATATCGCCCAGGATTGGATCGAC
AAGCTCCCGCCGCGGTCCTACGACGAGGAGTATGTGCTCAAGAGAAATTCCAGGGCTAGGACTTTGAACAAGCACTCAAGGCTTGGCTGCCAGGTTATTCTCACTCCCGA
CCTTGAAGGTTGGAGGCTGGAGTGGTTGGTTTTTAAAGGGCCTGTCTAGACACTTGGTGTGCCTTACTTTCCTAAAGCAAGGTGCCCTTGGTAAGGGCTATGGCACATCC
TGTAATGCACCCCATGCTTCTAATTAGTTTCTTTTATAAGAAATATGTTTTGTAGAAGTGTATATTTTTAAATTTAATGTTATATTTCATCAGGTATGTGTGTATATAGA
CACTGAGAGTGGTCTTCTTTTCCTAACTTAAAGTTATCAGTATGTCTTTTCATAGTGGTTTT

Protein sequence

Show/hide protein sequence

MAVANLHRLRQIHRLPAIGYSKTIFSRWSASATTSLESSSSSSKKVSDRTIKLLVYDPEGTKKEIVGLTGQTLLKALANRGLIDPDSHRLEDIDACSAECEVNIAQDWID
KLPPRSYDEEYVLKRNSRARTLNKHSRLGCQVILTPDLEGWRLEWLVFKGPV

PI0008481 (gene) of Melon (PI 482460) v1 genome