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PI0008492 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008492
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:23462305..23462550
RNA-Seq ExpressionPI0008492
SyntenyPI0008492
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041444.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-1963.75Show/hide
Query:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD
        +EY N+QL  IAEWP  QRQDAS TR EVVRQL+ I EL+ +DR R MRILMR+VDDMKAF+D+P+ +K  YC++ILQ++
Subjt:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD

KAA0048280.1 retrotransposon protein [Cucumis melo var. makuwa]6.3e-1961.25Show/hide
Query:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD
        MEY N+QL  IAEWP  QRQDA+ TR E+VRQL+ I EL+ +DR R MRI+MR+VDDMKAF+++PD +K  YC++ILQ++
Subjt:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD

KAA0054687.1 retrotransposon protein [Cucumis melo var. makuwa]6.3e-1961.25Show/hide
Query:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD
        +EY N+QL  IAEWP  QRQDA+ TR E+VRQL+ I EL+ +DR R MRILMR+VDDMKAF+++PD +K  YC +ILQ++
Subjt:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD

KAA0058838.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-1964.2Show/hide
Query:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA
        +E ANDQL+ IAEWPK   QD   TR EV+RQL+ I ELS LDRARC+R LM+++ DMKAF+ +P+E+K+DYC VILQDDA
Subjt:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]2.5e-2069.14Show/hide
Query:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA
        ME++ND+LKAI EW   QRQDAS    EVVRQLQ I ELSR DR R M+ILM +VDDMKAF+DI DE+KLDYCT+I QD+A
Subjt:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA

TrEMBL top hitse value%identityAlignment
A0A5A7TDD6 Retrotransposon protein8.0e-2063.75Show/hide
Query:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD
        +EY N+QL  IAEWP  QRQDAS TR EVVRQL+ I EL+ +DR R MRILMR+VDDMKAF+D+P+ +K  YC++ILQ++
Subjt:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD

A0A5A7TYQ6 Retrotransposon protein3.0e-1961.25Show/hide
Query:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD
        MEY N+QL  IAEWP  QRQDA+ TR E+VRQL+ I EL+ +DR R MRI+MR+VDDMKAF+++PD +K  YC++ILQ++
Subjt:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD

A0A5A7UUF7 Retrotransposon protein1.0e-1964.2Show/hide
Query:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA
        +E ANDQL+ IAEWPK   QD   TR EV+RQL+ I ELS LDRARC+R LM+++ DMKAF+ +P+E+K+DYC VILQDDA
Subjt:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA

A0A5A7V469 Retrotransposon protein1.2e-2069.14Show/hide
Query:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA
        ME++ND+LKAI EW   QRQDAS    EVVRQLQ I ELSR DR R M+ILM +VDDMKAF+DI DE+KLDYCT+I QD+A
Subjt:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA

A0A5D3D058 Retrotransposon protein3.0e-1962.5Show/hide
Query:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD
        +EY N+QL  IAEWP  QRQDA+ TR E+VRQL+ I EL+ +DR R MRILMR+VDDMKAF++IPD +K  YC++ILQ++
Subjt:  MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATGCTAATGACCAACTTAAGGCCATTGCAGAATGGCCCAAAGAACAACGGCAAGATGCAAGCGTGACACGTGCGGAAGTCGTTAGACAGCTACAGGGAATCTC
GGAGCTGAGTCGACTAGATAGGGCTCGTTGTATGCGTATATTGATGCGCAGCGTAGATGACATGAAAGCATTTATAGACATCCCGGACGAGGTTAAGTTGGATTACTGCA
CGGTCATACTCCAAGATGACGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATATGCTAATGACCAACTTAAGGCCATTGCAGAATGGCCCAAAGAACAACGGCAAGATGCAAGCGTGACACGTGCGGAAGTCGTTAGACAGCTACAGGGAATCTC
GGAGCTGAGTCGACTAGATAGGGCTCGTTGTATGCGTATATTGATGCGCAGCGTAGATGACATGAAAGCATTTATAGACATCCCGGACGAGGTTAAGTTGGATTACTGCA
CGGTCATACTCCAAGATGACGCTTGA
Protein sequenceShow/hide protein sequence
MEYANDQLKAIAEWPKEQRQDASVTRAEVVRQLQGISELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA