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PI0008532 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008532
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr09:12813127..12813975
RNA-Seq ExpressionPI0008532
SyntenyPI0008532
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032031.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.9e-1663.51Show/hide
Query:  KGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSLS
        KGEV KV SC VC M GHHNDQC  +KE+S +G F RND QSN Y   WR HPNLR G Q  K +NTS SSS S
Subjt:  KGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSLS

KAA0042324.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]3.6e-1763.16Show/hide
Query:  MKGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSLSQ
        +KG+VPKV SCGV  ++GHHNDQ  +LKE+S +  FRRND  SNTY   WR HPNLR GPQ  K +NTS SSS SQ
Subjt:  MKGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSLSQ

KAA0063400.1 hypothetical protein E6C27_scaffold508G00320 [Cucumis melo var. makuwa]3.0e-1665.28Show/hide
Query:  GEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSL
        G  PKV SCGV DM+ HH+DQC +LK +S IG FRRND QSNTY   WR H NLR GPQ  K +NTS SSSL
Subjt:  GEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSL

KAE8647060.1 hypothetical protein Csa_022980 [Cucumis sativus]2.7e-1760.27Show/hide
Query:  MKGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSS
        +KGEVPKV SCGVC ++GHHNDQC ++KE+S +G +RRND QSN Y   WR  P+LR GPQ  K +NT  +SS
Subjt:  MKGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSS

TYK15878.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.1e-1368.52Show/hide
Query:  KVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGP
        KVASCG C ++GHHNDQC  LKE+S +G FRRND QSNTY   WR HPNL+ GP
Subjt:  KVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGP

TrEMBL top hitse value%identityAlignment
A0A0A0KEQ8 Uncharacterized protein1.3e-1760.27Show/hide
Query:  MKGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSS
        +KGEVPKV SCGVC ++GHHNDQC ++KE+S +G +RRND QSN Y   WR  P+LR GPQ  K +NT  +SS
Subjt:  MKGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSS

A0A5A7SR51 Retrotransposon gag protein1.9e-1663.51Show/hide
Query:  KGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSLS
        KGEV KV SC VC M GHHNDQC  +KE+S +G F RND QSN Y   WR HPNLR G Q  K +NTS SSS S
Subjt:  KGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSLS

A0A5D3CKE7 Uncharacterized protein1.5e-1665.28Show/hide
Query:  GEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSL
        G  PKV SCGV DM+ HH+DQC +LK +S IG FRRND QSNTY   WR H NLR GPQ  K +NTS SSSL
Subjt:  GEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSL

A0A5D3CW21 Retrovirus-related Pol polyprotein from transposon 297 family1.7e-1763.16Show/hide
Query:  MKGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSLSQ
        +KG+VPKV SCGV  ++GHHNDQ  +LKE+S +  FRRND  SNTY   WR HPNLR GPQ  K +NTS SSS SQ
Subjt:  MKGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSLSQ

A0A5D3CX98 Retrotransposon gag protein2.0e-1368.52Show/hide
Query:  KVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGP
        KVASCG C ++GHHNDQC  LKE+S +G FRRND QSNTY   WR HPNL+ GP
Subjt:  KVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGTGAGGTTCCTAAGGTAGCTTCCTGTGGAGTATGTGACATGATTGGCCACCACAACGATCAATGTTCTGACTTGAAAGAGCTAAGTACGATAGGCAACTTTAG
GAGGAATGACCCACAAAGCAACACGTATATCCCTCGATGGAGGTATCATCCCAATCTTAGATTGGGTCCACAAGGCCAAAAGTCGTCTAACACTTCTCCCTCTTCTTCCT
TATCGCAAAGGCAAGACGCCACTCACAGACGAAGCCGAGCCGAGGAGCTGCGCGAGCCAGCCGTCTGTGCTGTTCTTCTTTGCGAGCCATCCCGAGCCCGTGCGAAGCCA
CACCGATCCGTCTCCTCCACGCGAAGCCGCGCCGCACCGATCTACCTTCTTTCATGCGAGACGATGCCGCACCGATCCGTCTCGCCCACGCGAAGCCGCGTCGCCGTCTG
CCTCTCTCTTGCGAAGCCGAGTCGCACCGCGCCGATCTGCCATCATTCACACGAAGCAAACAGTGCCGATCTACCTTCCTTCACGCGAGACGACGCCGTGCCGATCCGTC
TCCCCCACGTAAAGTCGCGCCGCCGTCTGCCTCCCTCTTGCGAAGCCGACCCGCACCGCGCTGATCTGCCATCATTCACGGGAAGCAAGCCGTGCTGCCTGCCGTCCAAG
CCGAGCCGCCGCACACTGCCTTTTTGTCAGTATGACCCAGTAGAGCTTTCGGGGCTGTTTGTGGTAAGTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGTGAGGTTCCTAAGGTAGCTTCCTGTGGAGTATGTGACATGATTGGCCACCACAACGATCAATGTTCTGACTTGAAAGAGCTAAGTACGATAGGCAACTTTAG
GAGGAATGACCCACAAAGCAACACGTATATCCCTCGATGGAGGTATCATCCCAATCTTAGATTGGGTCCACAAGGCCAAAAGTCGTCTAACACTTCTCCCTCTTCTTCCT
TATCGCAAAGGCAAGACGCCACTCACAGACGAAGCCGAGCCGAGGAGCTGCGCGAGCCAGCCGTCTGTGCTGTTCTTCTTTGCGAGCCATCCCGAGCCCGTGCGAAGCCA
CACCGATCCGTCTCCTCCACGCGAAGCCGCGCCGCACCGATCTACCTTCTTTCATGCGAGACGATGCCGCACCGATCCGTCTCGCCCACGCGAAGCCGCGTCGCCGTCTG
CCTCTCTCTTGCGAAGCCGAGTCGCACCGCGCCGATCTGCCATCATTCACACGAAGCAAACAGTGCCGATCTACCTTCCTTCACGCGAGACGACGCCGTGCCGATCCGTC
TCCCCCACGTAAAGTCGCGCCGCCGTCTGCCTCCCTCTTGCGAAGCCGACCCGCACCGCGCTGATCTGCCATCATTCACGGGAAGCAAGCCGTGCTGCCTGCCGTCCAAG
CCGAGCCGCCGCACACTGCCTTTTTGTCAGTATGACCCAGTAGAGCTTTCGGGGCTGTTTGTGGTAAGTGTGTAA
Protein sequenceShow/hide protein sequence
MKGEVPKVASCGVCDMIGHHNDQCSDLKELSTIGNFRRNDPQSNTYIPRWRYHPNLRLGPQGQKSSNTSPSSSLSQRQDATHRRSRAEELREPAVCAVLLCEPSRARAKP
HRSVSSTRSRAAPIYLLSCETMPHRSVSPTRSRVAVCLSLAKPSRTAPICHHSHEANSADLPSFTRDDAVPIRLPHVKSRRRLPPSCEADPHRADLPSFTGSKPCCLPSK
PSRRTLPFCQYDPVELSGLFVVSV