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PI0008542 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008542
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr02:17432226..17432657
RNA-Seq ExpressionPI0008542
SyntenyPI0008542
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5469007.1 hypothetical protein F2P56_013112 [Juglans regia]2.7e-1741.82Show/hide
Query:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEADNWQYGSW
        + K +   IG+FLE+D  +  F WGE +R++V+LDIS PL+R   ++ G      W+++ YERLP+FCY CG +GH ++EC E     + E D   YG+W
Subjt:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEADNWQYGSW

Query:  LKYQGSIPRR
        L+   S P+R
Subjt:  LKYQGSIPRR

XP_021749920.1 uncharacterized protein LOC110715641 [Chenopodium quinoa]1.7e-1941.32Show/hide
Query:  KRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEAD-NWQYGSWL
        + + D++G F++ID D D   WGE +RIKV++++ KPLRRG+++  GGNGK +W+ ++YERL +FC+ CG + H  KEC +K+ + D   +  +QYG WL
Subjt:  KRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEAD-NWQYGSWL

Query:  KYQGSIPRRKRKSTPKKNEKE
        +   + P +  +S     EKE
Subjt:  KYQGSIPRRKRKSTPKKNEKE

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.5e-1843.81Show/hide
Query:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEADNWQYGSW
        MA RL +AIG F +++ + +NF WG  LR++V  D+ KPL RGI +   G     WI ++YERLP+F Y CG++ H++K+C +   D    + N QYG W
Subjt:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEADNWQYGSW

Query:  LKYQG
        L++QG
Subjt:  LKYQG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.0e-2141.48Show/hide
Query:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQ-HDKDLEADNWQYGS
        MA RL +AIG+F+++DC+   F WG +LRI+V++DI+KPLRRGI I   G     WI ++YERLP+FCY CG IGH   +C  +    +D      +YG 
Subjt:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQ-HDKDLEADNWQYGS

Query:  WLKYQGSIPRRKRKSTPKKNEKEESSSDFSSSQPE
        WL++ GS    ++    K   +E+S    S +  E
Subjt:  WLKYQGSIPRRKRKSTPKKNEKEESSSDFSSSQPE

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.2e-1945.11Show/hide
Query:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEADNWQYGSW
        MA RL +A+G F E DCD  N  WG NLR++V+LDISKPLRRGI +   G     WI ++YERLP+FCY CG           K+H         QYGSW
Subjt:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEADNWQYGSW

Query:  LKYQGSI-PRRKRKSTPKKNEKEES-SSDFSSS
        L+YQG++ P   +   P+++  ++S ++ FSSS
Subjt:  LKYQGSI-PRRKRKSTPKKNEKEES-SSDFSSS

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054811.2e-1843.81Show/hide
Query:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEADNWQYGSW
        MA RL +AIG F +++ + +NF WG  LR++V  D+ KPL RGI +   G     WI ++YERLP+F Y CG++ H++K+C +   D    + N QYG W
Subjt:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEADNWQYGSW

Query:  LKYQG
        L++QG
Subjt:  LKYQG

A0A6J1DU55 uncharacterized protein LOC1110231354.4e-2141.48Show/hide
Query:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQ-HDKDLEADNWQYGS
        MA RL +AIG+F+++DC+   F WG +LRI+V++DI+KPLRRGI I   G     WI ++YERLP+FCY CG IGH   +C  +    +D      +YG 
Subjt:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQ-HDKDLEADNWQYGS

Query:  WLKYQGSIPRRKRKSTPKKNEKEESSSDFSSSQPE
        WL++ GS    ++    K   +E+S    S +  E
Subjt:  WLKYQGSIPRRKRKSTPKKNEKEESSSDFSSSQPE

A0A6J1DX30 uncharacterized protein LOC1110248741.1e-1945.11Show/hide
Query:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEADNWQYGSW
        MA RL +A+G F E DCD  N  WG NLR++V+LDISKPLRRGI +   G     WI ++YERLP+FCY CG           K+H         QYGSW
Subjt:  MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEADNWQYGSW

Query:  LKYQGSI-PRRKRKSTPKKNEKEES-SSDFSSS
        L+YQG++ P   +   P+++  ++S ++ FSSS
Subjt:  LKYQGSI-PRRKRKSTPKKNEKEES-SSDFSSS

A0A803LAB8 Uncharacterized protein5.9e-1843.22Show/hide
Query:  DAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEAD-NWQYGSWLKYQG
        D +G FLE D D D   WGE LRIKV++DI+KPLRRG+++  G +  ++W+ ++YERL EFC+ CG++ H    C  K   K++ AD  +QYG WL+   
Subjt:  DAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEAD-NWQYGSWLKYQG

Query:  SIPRRKRKSTPKKNEKEE
        + PR++ + +  + EKE+
Subjt:  SIPRRKRKSTPKKNEKEE

A0A803NE34 Uncharacterized protein2.0e-1842.37Show/hide
Query:  DAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECK-EKQHDKDLEADNWQYGSWLKYQG
        +++G FLE D D D   WGE +R+K++ DI+KPLRRGI I+  GN   +WI  +YERL +FCY CG++GH  ++C  + + D+D  +  +QYG WL    
Subjt:  DAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECK-EKQHDKDLEADNWQYGSWLKYQG

Query:  SIPRRKRKSTPKKNEKEE
        + P  K + T    E+E+
Subjt:  SIPRRKRKSTPKKNEKEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGCGACTCAGAGATGCAATAGGAGATTTCCTTGAAATCGATTGTGACCGAGACAACTTCTATTGGGGTGAAAACTTGCGTATCAAAGTGGTACTGGATATTTC
CAAACCCTTGAGAAGAGGCATTTGGATTGAACCAGGAGGCAACGGAAAAAATGAGTGGATTCAAGTTCGTTATGAAAGGCTACCCGAATTTTGCTATGGTTGCGGAAAGA
TTGGTCACATGGTTAAGGAATGCAAGGAGAAACAACATGACAAAGACTTGGAAGCTGATAACTGGCAATATGGAAGTTGGTTAAAATACCAAGGCTCCATTCCAAGAAGA
AAAAGAAAATCAACCCCCAAAAAGAATGAAAAAGAAGAATCCTCCTCAGATTTCTCCTCTTCACAACCTGAGACGCATCACCCACTACTCTCATACCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGCGACTCAGAGATGCAATAGGAGATTTCCTTGAAATCGATTGTGACCGAGACAACTTCTATTGGGGTGAAAACTTGCGTATCAAAGTGGTACTGGATATTTC
CAAACCCTTGAGAAGAGGCATTTGGATTGAACCAGGAGGCAACGGAAAAAATGAGTGGATTCAAGTTCGTTATGAAAGGCTACCCGAATTTTGCTATGGTTGCGGAAAGA
TTGGTCACATGGTTAAGGAATGCAAGGAGAAACAACATGACAAAGACTTGGAAGCTGATAACTGGCAATATGGAAGTTGGTTAAAATACCAAGGCTCCATTCCAAGAAGA
AAAAGAAAATCAACCCCCAAAAAGAATGAAAAAGAAGAATCCTCCTCAGATTTCTCCTCTTCACAACCTGAGACGCATCACCCACTACTCTCATACCCATAG
Protein sequenceShow/hide protein sequence
MAKRLRDAIGDFLEIDCDRDNFYWGENLRIKVVLDISKPLRRGIWIEPGGNGKNEWIQVRYERLPEFCYGCGKIGHMVKECKEKQHDKDLEADNWQYGSWLKYQGSIPRR
KRKSTPKKNEKEESSSDFSSSQPETHHPLLSYP