; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008554 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008554
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr08:22682902..22684202
RNA-Seq ExpressionPI0008554
SyntenyPI0008554
Gene Ontology termsGO:0002128 - tRNA nucleoside ribose methylation (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008175 - tRNA methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058925.1 RNA-binding protein 2 [Cucumis melo var. makuwa]4.7e-0941.67Show/hide
Query:  FCVGRWRKTLD----------HVFWHCEMVSRVWDAFFQTFG--------LSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERN
        FC    R+TLD          H F++     RVW +  + F         LS +  + V+ MI++FLLN P GK+ RFLWCA V A LW LWDERN
Subjt:  FCVGRWRKTLD----------HVFWHCEMVSRVWDAFFQTFG--------LSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERN

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]5.0e-1151.39Show/hide
Query:  FCVGRWR--KTLDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATL
        F +  W+  + LDH+ WHCE+VS VWD F QTFGLS   H  V+  ++EFLLN P G++  FLW A V A L
Subjt:  FCVGRWR--KTLDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATL

TYK11201.1 SIL1 [Cucumis melo var. makuwa]1.3e-0636.26Show/hide
Query:  WIGFRGRCCRWLDL----FAVFCVGRWRKTLDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATL
        WI    R  + + L    F+ F   + ++ LD++FW C+    VW++F Q F    V    V+  I+EFLL+PPF +K   LW A VCA +
Subjt:  WIGFRGRCCRWLDL----FAVFCVGRWRKTLDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATL

XP_016900613.1 PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo]1.5e-1559.42Show/hide
Query:  LDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERN
        LDH+  H  + S +WDAF QTFGL    H  V+ MI+EFLLN P G++ RFLW A VCA LWVLWDE N
Subjt:  LDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERN

XP_031745951.1 LOW QUALITY PROTEIN: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus]2.7e-0974.36Show/hide
Query:  IVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERN
        +V+DMIK +LLN  FG+KDRFLWCAS+ A LWVLWDERN
Subjt:  IVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERN

TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909767.3e-1659.42Show/hide
Query:  LDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERN
        LDH+  H  + S +WDAF QTFGL    H  V+ MI+EFLLN P G++ RFLW A VCA LWVLWDE N
Subjt:  LDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERN

A0A200QJ46 Reverse transcriptase zinc-binding domain5.2e-0636.62Show/hide
Query:  KTLDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERN
        ++++H+  HC + S VW+ FF  FG+    H  V  + +E  LN  F K+   LW     A  W LW+ERN
Subjt:  KTLDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERN

A0A5A7UZB5 RNA-binding protein 22.3e-0941.67Show/hide
Query:  FCVGRWRKTLD----------HVFWHCEMVSRVWDAFFQTFG--------LSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERN
        FC    R+TLD          H F++     RVW +  + F         LS +  + V+ MI++FLLN P GK+ RFLWCA V A LW LWDERN
Subjt:  FCVGRWRKTLD----------HVFWHCEMVSRVWDAFFQTFG--------LSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERN

A0A5D3CHC7 SIL16.2e-0736.26Show/hide
Query:  WIGFRGRCCRWLDL----FAVFCVGRWRKTLDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATL
        WI    R  + + L    F+ F   + ++ LD++FW C+    VW++F Q F    V    V+  I+EFLL+PPF +K   LW A VCA +
Subjt:  WIGFRGRCCRWLDL----FAVFCVGRWRKTLDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATL

A0A5D3CI74 Calpain-type cysteine protease DEK12.4e-1151.39Show/hide
Query:  FCVGRWR--KTLDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATL
        F +  W+  + LDH+ WHCE+VS VWD F QTFGLS   H  V+  ++EFLLN P G++  FLW A V A L
Subjt:  FCVGRWR--KTLDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTATCAGCACGTTGGATAGGTTTTCGAGGAAGATGTTGTCGTTGGTTGGACCTTTTTGCTGTATTCTGTGTTGGAAGGTGGAGGAAGACTTTAGACCATGTCTT
TTGGCATTGTGAGATGGTGAGCCGTGTTTGGGATGCCTTTTTCCAGACTTTTGGCTTAAGCAGTGTTTGTCACATAATTGTTAAAGATATGATCAAGGAGTTCCTCCTCA
ATCCTCCATTTGGGAAGAAAGACCGATTTCTCTGGTGTGCTAGTGTCTGTGCTACTTTGTGGGTGTTATGGGACGAGAGGAATGGAGGCCTGTCTGCTCCACACTACCGG
TAA
mRNA sequenceShow/hide mRNA sequence
ACTATAGGTTGTGGTACTCTGAGGTGAAAATTCTAAAGCTAGATCTTAGAGTTGTTTATGAGTACACTACTTTTCCGTATTCTAATCTAAAACTTCTAGGCACCGTTTTA
CAAACCTTTGGTTTTTGGTTTTGATTTTTAAAAATTGTTATGCTTTCTCACAATTTCTTTACAATGGTTCATTTTCTCTAAGGTAACACTTGAATTCTTAGGCCACGTAG
TAATGAGAATTAAGGTCCTTGAGAATCACCCATTTCGTTTTGGGAGGACAGATGTGAGAGTCTAGAGCCCCAGTCCTTTGGATGGGTTCTTGTGTAAGTCTTTTTTTCAG
TGCTTGGTTAATCCTTCACCTCTGGTTGAGTTGATCTTTCCATCAATTTGGAGGATTAAGGTCCCTAGAAAGGTTCGTTTCTTTACCTGACGTGTCCTTCATGGCCGTAT
CAGCACGTTGGATAGGTTTTCGAGGAAGATGTTGTCGTTGGTTGGACCTTTTTGCTGTATTCTGTGTTGGAAGGTGGAGGAAGACTTTAGACCATGTCTTTTGGCATTGT
GAGATGGTGAGCCGTGTTTGGGATGCCTTTTTCCAGACTTTTGGCTTAAGCAGTGTTTGTCACATAATTGTTAAAGATATGATCAAGGAGTTCCTCCTCAATCCTCCATT
TGGGAAGAAAGACCGATTTCTCTGGTGTGCTAGTGTCTGTGCTACTTTGTGGGTGTTATGGGACGAGAGGAATGGAGGCCTGTCTGCTCCACACTACCGGTAA
Protein sequenceShow/hide protein sequence
MAVSARWIGFRGRCCRWLDLFAVFCVGRWRKTLDHVFWHCEMVSRVWDAFFQTFGLSSVCHIIVKDMIKEFLLNPPFGKKDRFLWCASVCATLWVLWDERNGGLSAPHYR