; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008575 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008575
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionphotosystem I reaction center subunit IV, chloroplastic-like
Genome locationchr05:14144831..14146019
RNA-Seq ExpressionPI0008575
SyntenyPI0008575
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009538 - photosystem I reaction center (cellular component)
InterPro domainsIPR003375 - Photosystem I PsaE, reaction centre subunit IV
IPR008990 - Electron transport accessory-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061399.1 photosystem I reaction center subunit IV [Cucumis melo var. makuwa]2.9e-59100Show/hide
Query:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
        VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
Subjt:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP

Query:  NTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        NTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  NTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

KAE8651724.1 hypothetical protein Csa_006032 [Cucumis sativus]4.1e-6195.21Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_004152807.2 photosystem I reaction center subunit IV, chloroplastic [Cucumis sativus]4.1e-6195.21Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_008441802.1 PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis melo]5.5e-66100Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_038889433.1 photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida]1.8e-6499.31Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRF+KVNYASVSTNNYALDEIEEVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

TrEMBL top hitse value%identityAlignment
A0A0A0LJQ1 Uncharacterized protein2.0e-6195.21Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A1S3B3T3 photosystem I reaction center subunit IV, chloroplastic-like2.7e-66100Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A5A7V6V9 Photosystem I reaction center subunit IV1.4e-59100Show/hide
Query:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
        VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
Subjt:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP

Query:  NTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        NTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  NTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A6J1FC09 photosystem I reaction center subunit IV, chloroplastic-like2.3e-5488.19Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGV+IPSSTTI SSSSR SS+AFFPKNS SISRS RLV+RAAA + AAPPP AAA A A AE PKPKPAPIGPKRG KVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A6J1HLT8 photosystem I reaction center subunit IV, chloroplastic-like1.5e-5387.5Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGV+IPSS TI SSSSR SS+AFFPKNS SISRS RLV+RAAA + AAPPP AAA A A AE PKPKPAPIGPKRG KVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

SwissProt top hitse value%identityAlignment
P12354 Photosystem I reaction center subunit IV, chloroplastic1.3e-3065.85Show/hide
Query:  SSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVR
        SS + RL      P  + S  RS+RLV+RAA  +EAA  P AA+P    A +   KP PIGPKRG+KV+I+RKESYWYK VGSVV VDQDP TRYPVVVR
Subjt:  SSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVR

Query:  FNKVNYASVSTNNYALDEIEEVA
        FNKVNYA+VSTNNYALDEI+EVA
Subjt:  FNKVNYASVSTNNYALDEIEEVA

P13194 Photosystem I reaction center subunit IV, chloroplastic1.4e-2754Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAA------PAAATAEEPKPKPAPIGPKRGAKVKILRK
        MA++N++   S  ++ +     ++    S ++F P N   +    +LV RA     AAP  PA A       A AT E  K KP P GPKRG KVKILR+
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAA------PAAATAEEPKPKPAPIGPKRGAKVKILRK

Query:  ESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        ESYWY   GSVVTVDQDPNTRYPVVVRF KVNYA VSTNNYALDEI+EVA
Subjt:  ESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

Q41228 Photosystem I reaction center subunit IV A, chloroplastic2.1e-3158.74Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MA+ N++  AS  ++ +    S++++  +++ FF  + N  S + RLV+RAA  +EAAPP  AA    A A     KP PIGPKRG KV+ILRKESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
          GSVV  DQDPNTRYPVVVRFNKVNYA+VSTNNYALDEIEEV
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

Q41229 Photosystem I reaction center subunit IV B, chloroplastic8.4e-3359.18Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRS-SRLVIRAAASDEAAPPPPAAAPAAATAEEP---KPKPAPIGPKRGAKVKILRKES
        MA+S+++  ASG ++ +    +S+++  +S+ FF  + N+ + +  RLV+RAA  +EAAPP   AA A A  E P     KP PIGPKRG KV++LRKES
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRS-SRLVIRAAASDEAAPPPPAAAPAAATAEEP---KPKPAPIGPKRGAKVKILRKES

Query:  YWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
        YWYK VGSVV VDQDPNTRYPVVVRFNKVNYA+VSTNNYALDE+EEV
Subjt:  YWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

Q9S831 Photosystem I reaction center subunit IV A, chloroplastic7.8e-3160.87Show/hide
Query:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA------AASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV
        V+P++ T+++ +SS  SS++F P      +  SRLV+RA      A+S     P  AAAP  ATA   KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV
Subjt:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA------AASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
         VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEVA
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

Arabidopsis top hitse value%identityAlignment
AT2G20260.1 photosystem I subunit E-23.7e-2854.73Show/hide
Query:  LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRAA-------ASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKE
        ++  A+G ++ ++   +    SS   + ++F P      S  SRLV+RAA       AS +++    AAAPA   A   K KP PIGPKRG+KVKILRKE
Subjt:  LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRAA-------ASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKE

Query:  SYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
        SYWYK+VGSVV VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEV
Subjt:  SYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

AT4G28750.1 Photosystem I reaction centre subunit IV / PsaE protein5.6e-3260.87Show/hide
Query:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA------AASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV
        V+P++ T+++ +SS  SS++F P      +  SRLV+RA      A+S     P  AAAP  ATA   KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV
Subjt:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA------AASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
         VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEVA
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTCATCCCTTCTTCAACCACCATCTCATCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTTCCC
CAAGAATTCCAACTCTATTTCTAGATCTTCTCGATTGGTTATCCGTGCCGCCGCCTCCGACGAGGCTGCTCCCCCACCCCCTGCTGCCGCTCCCGCTGCCGCCACCGCCG
AAGAGCCTAAGCCTAAGCCTGCCCCAATTGGTCCCAAAAGAGGTGCCAAGGTGAAGATTTTAAGGAAAGAATCTTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTT
GACCAGGATCCCAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTA
A
mRNA sequenceShow/hide mRNA sequence
GTGGTTATCATTATTTCATTGGGTTTATCTCTTCATCTTCCAAAGCATTAACATATTCTTCATTCATCAGTTAAAGGGCATAGAGAAAAAGAAATTTGAAAGACAAAAGG
GCAATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTCATCCCTTCTTCAACCACCATCTCATCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTT
CCCCAAGAATTCCAACTCTATTTCTAGATCTTCTCGATTGGTTATCCGTGCCGCCGCCTCCGACGAGGCTGCTCCCCCACCCCCTGCTGCCGCTCCCGCTGCCGCCACCG
CCGAAGAGCCTAAGCCTAAGCCTGCCCCAATTGGTCCCAAAAGAGGTGCCAAGGTGAAGATTTTAAGGAAAGAATCTTACTGGTACAAGGATGTTGGATCTGTTGTAACA
GTTGACCAGGATCCCAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGC
TTAAGCTTTTTTAATTTGCTTGTGTATTTTTGAGTTAAAAATGTTTGTATAATACTCCAATTTCAATCTATTTCTCCCTCTCTCCATGAATGTGTGTTTAGTAATTCTAA
CCACAATTTCTCTTCCTTTTTACTTATATGTTTCACAACAATCACATTTTCCAATGCTTCATTTTGGGAGATTAAAATAGTTTTACTTTACAACATTCTACTTCCTAAGT
AGAACAAATGGGAAACAATGGTGCAAGTTTGAATTGTGTAAATAGATCTTTCTTTTTTGGGACA
Protein sequenceShow/hide protein sequence
MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTV
DQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA