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PI0008613 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008613
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:11913432..11914662
RNA-Seq ExpressionPI0008613
SyntenyPI0008613
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057976.1 uncharacterized protein E6C27_scaffold274G002800 [Cucumis melo var. makuwa]5.4e-1946.71Show/hide
Query:  MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKK------KVK---------------------------------------------TRTNKSEN
        MKVD   F  KLDVEAFL WVKNVES F+YME   DKK      K+K                                             T+TN+SEN
Subjt:  MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKK------KVK---------------------------------------------TRTNKSEN

Query:  YQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAKVKLETKQKTIGMKKN
         QIARFVDGLK++I E+LDLQPI + PAAI MA KAK+KLE +QK  G KKN
Subjt:  YQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAKVKLETKQKTIGMKKN

KAA0064244.1 uncharacterized protein E6C27_scaffold548G001980 [Cucumis melo var. makuwa]2.7e-1065.52Show/hide
Query:  KKKVKTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAKVKLETKQK
        ++  +TRTNKSENYQIARFVDGLK++I E+LDLQP+ + PAAI M +KA++KLE +QK
Subjt:  KKKVKTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAKVKLETKQK

TYK13853.1 uncharacterized protein E5676_scaffold832G00370 [Cucumis melo var. makuwa]7.6e-2148.59Show/hide
Query:  KTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAKVKLETKQKTIGMKKNPSDKTVTPYQRKNYDSYKHGQSYNSTRDKEDQPNKPNQN
        +TRTN+SENYQIA+FVDGLK++I E++DLQPI +  AAISMA+KA++KLE +QK  G KKN  DKT TPYQRKNYD+ +  Q + +++ KE Q +K NQ+
Subjt:  KTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAKVKLETKQKTIGMKKNPSDKTVTPYQRKNYDSYKHGQSYNSTRDKEDQPNKPNQN

Query:  SKNEETPTRKEDPILIKDRILVFVTHTTKNGICLMNVLNRRR
         + +E   +K            F T  TK     +N  N +R
Subjt:  SKNEETPTRKEDPILIKDRILVFVTHTTKNGICLMNVLNRRR

TYK16074.1 hypothetical protein E5676_scaffold32G00940 [Cucumis melo var. makuwa]8.1e-3160.29Show/hide
Query:  MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKKK--------------VKTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAK
        MKVDL  F GKLDVEAFLDWVKNVESFFEYME   DKK                +TR NKSENYQ+A FVD LK+ I+++LDLQPI +   AISMA+KA+
Subjt:  MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKKK--------------VKTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAK

Query:  VKLETKQKTIGMKKNPSDKTVTPYQRKNYDSYKHGQ
        +KLE ++   G KKN SDK  T YQRKNYD+ K GQ
Subjt:  VKLETKQKTIGMKKNPSDKTVTPYQRKNYDSYKHGQ

XP_028556538.1 uncharacterized protein LOC110116452 [Dendrobium catenatum]8.7e-0936.19Show/hide
Query:  MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKK----------------KVKTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYK
        +K+D+P F G+L +E +LDW ++VE+FF+YME   +K+                 V+   N++ N  +AR + GLKD IQ+KL+L  + S   A++ A K
Subjt:  MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKK----------------KVKTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYK

Query:  AKVKL
        A+++L
Subjt:  AKVKL

TrEMBL top hitse value%identityAlignment
A0A5A7UUZ0 Retrotrans_gag domain-containing protein2.6e-1946.71Show/hide
Query:  MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKK------KVK---------------------------------------------TRTNKSEN
        MKVD   F  KLDVEAFL WVKNVES F+YME   DKK      K+K                                             T+TN+SEN
Subjt:  MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKK------KVK---------------------------------------------TRTNKSEN

Query:  YQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAKVKLETKQKTIGMKKN
         QIARFVDGLK++I E+LDLQPI + PAAI MA KAK+KLE +QK  G KKN
Subjt:  YQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAKVKLETKQKTIGMKKN

A0A5D3CH16 Reverse transcriptase1.8e-0765.79Show/hide
Query:  MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKK
        MK+DLPT+ GK D+E+FLDW+KN+E+FF YM+TP+ KK
Subjt:  MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKK

A0A5D3CPR5 Uncharacterized protein3.7e-2148.59Show/hide
Query:  KTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAKVKLETKQKTIGMKKNPSDKTVTPYQRKNYDSYKHGQSYNSTRDKEDQPNKPNQN
        +TRTN+SENYQIA+FVDGLK++I E++DLQPI +  AAISMA+KA++KLE +QK  G KKN  DKT TPYQRKNYD+ +  Q + +++ KE Q +K NQ+
Subjt:  KTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAKVKLETKQKTIGMKKNPSDKTVTPYQRKNYDSYKHGQSYNSTRDKEDQPNKPNQN

Query:  SKNEETPTRKEDPILIKDRILVFVTHTTKNGICLMNVLNRRR
         + +E   +K            F T  TK     +N  N +R
Subjt:  SKNEETPTRKEDPILIKDRILVFVTHTTKNGICLMNVLNRRR

A0A5D3CYP4 Uncharacterized protein3.9e-3160.29Show/hide
Query:  MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKKK--------------VKTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAK
        MKVDL  F GKLDVEAFLDWVKNVESFFEYME   DKK                +TR NKSENYQ+A FVD LK+ I+++LDLQPI +   AISMA+KA+
Subjt:  MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKKK--------------VKTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAK

Query:  VKLETKQKTIGMKKNPSDKTVTPYQRKNYDSYKHGQ
        +KLE ++   G KKN SDK  T YQRKNYD+ K GQ
Subjt:  VKLETKQKTIGMKKNPSDKTVTPYQRKNYDSYKHGQ

A0A5D3D505 Uncharacterized protein1.3e-1065.52Show/hide
Query:  KKKVKTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAKVKLETKQK
        ++  +TRTNKSENYQIARFVDGLK++I E+LDLQP+ + PAAI M +KA++KLE +QK
Subjt:  KKKVKTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVS-PAAISMAYKAKVKLETKQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTGGACTTGCCTACATTCGGTGGAAAATTGGATGTTGAGGCATTTCTTGATTGGGTTAAAAATGTGGAAAGTTTCTTCGAGTATATGGAGACACCCAATGACAA
GAAAAAAGTAAAGACTCGAACAAACAAGAGTGAGAACTACCAAATTGCTCGATTTGTTGATGGCCTCAAAGATGAAATACAAGAGAAACTTGATTTGCAACCTATAGTCT
CACCAGCGGCAATTTCAATGGCCTATAAAGCCAAAGTCAAGTTGGAGACAAAGCAGAAAACAATCGGCATGAAGAAGAATCCTTCGGATAAGACAGTCACTCCTTACCAA
CGGAAAAATTACGATAGTTACAAGCATGGTCAAAGTTATAACTCAACAAGGGATAAAGAAGATCAACCAAACAAGCCCAACCAAAATTCAAAGAACGAAGAGACACCAAC
AAGAAAGGAGGATCCAATACTTATCAAAGACCGAATCTTGGTTTTTGTTACGCATACAACCAAAAACGGCATTTGTCTAATGAATGTCCTCAACAGAAGACGGGGGCATA
TGTTGAAGGTAAAGAAAGCTAAGAAGATGAAATGGTGCCAAATTCCGAAGATGTCAATGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTGGACTTGCCTACATTCGGTGGAAAATTGGATGTTGAGGCATTTCTTGATTGGGTTAAAAATGTGGAAAGTTTCTTCGAGTATATGGAGACACCCAATGACAA
GAAAAAAGTAAAGACTCGAACAAACAAGAGTGAGAACTACCAAATTGCTCGATTTGTTGATGGCCTCAAAGATGAAATACAAGAGAAACTTGATTTGCAACCTATAGTCT
CACCAGCGGCAATTTCAATGGCCTATAAAGCCAAAGTCAAGTTGGAGACAAAGCAGAAAACAATCGGCATGAAGAAGAATCCTTCGGATAAGACAGTCACTCCTTACCAA
CGGAAAAATTACGATAGTTACAAGCATGGTCAAAGTTATAACTCAACAAGGGATAAAGAAGATCAACCAAACAAGCCCAACCAAAATTCAAAGAACGAAGAGACACCAAC
AAGAAAGGAGGATCCAATACTTATCAAAGACCGAATCTTGGTTTTTGTTACGCATACAACCAAAAACGGCATTTGTCTAATGAATGTCCTCAACAGAAGACGGGGGCATA
TGTTGAAGGTAAAGAAAGCTAAGAAGATGAAATGGTGCCAAATTCCGAAGATGTCAATGAGTTAGGTCCGGACGTGAAGAACAACTTTCTTGTGTTGTTCGAAGAATTCT
ACTCACCCCAAAAACCGAGACTCGTCCATAAAGACACTCATTATTCCGGACTTGTTGTACAATCAAAGGCTGCAACATAATGGATAGCAGAAGTAGCAAAAACATAGTCC
GTTCAAAACTTGTGCAAGCCCTTAGTCTTAAATTAGGTCCACACTGACATCCTTACAAAGTTAGTTGCATCAAGAAGAGTGGCAAAGCACAGATCAATTCAACTTGCAAT
TCCCCTCTCTATCGGTAATTTTTATATAGATCAAACTATTTGTGACGTGTTTGACATGGATGTTCGCCATATTTTGTTTGGTTGTCCTTGGCAATATGACTTGCAAGCCA
CTCA
Protein sequenceShow/hide protein sequence
MKVDLPTFGGKLDVEAFLDWVKNVESFFEYMETPNDKKKVKTRTNKSENYQIARFVDGLKDEIQEKLDLQPIVSPAAISMAYKAKVKLETKQKTIGMKKNPSDKTVTPYQ
RKNYDSYKHGQSYNSTRDKEDQPNKPNQNSKNEETPTRKEDPILIKDRILVFVTHTTKNGICLMNVLNRRRGHMLKVKKAKKMKWCQIPKMSMS