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PI0008628 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008628
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr01:18560873..18561979
RNA-Seq ExpressionPI0008628
SyntenyPI0008628
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.2e-2840.19Show/hide
Query:  SEIVGLLILLQIWAWEQLPTMASQLQHRN---------------QICVTRSTAYVISQYRYMFDLLQRDQ------------------------------
        S + GLLILLQIWAWE+  T+A QL H N               Q CVTR   +V+SQYRYMFDLLQRDQ                              
Subjt:  SEIVGLLILLQIWAWEQLPTMASQLQHRN---------------QICVTRSTAYVISQYRYMFDLLQRDQ------------------------------

Query:  ------------------------------------------RSNNIRSCDIEDYQQQVLDISNSNERYMEELHYMYNVPIVTPPVHKGCARVGEVELNE
                                                  RSNN R  D+ D  QQVL+I N+N+RYMEE+H MY++ IV PPVH+G  RV E EL+E
Subjt:  ------------------------------------------RSNNIRSCDIEDYQQQVLDISNSNERYMEELHYMYNVPIVTPPVHKGCARVGEVELNE

Query:  VYHNVEKVPPMTQT
        VYHNVE+VPP TQT
Subjt:  VYHNVEKVPPMTQT

KAA0064192.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.2e-3155.32Show/hide
Query:  WHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQHRNQICVTRSTAYVISQYRYMFDLLQRDQRSNNIRSCDIEDYQQQVLDISNSNERYMEEL
        W    LCK  KRDV +IVG LILLQIWAWE+ PT+A QL H N                ++        RSNN R  D+ +  QQVLDI N+NERYMEE+
Subjt:  WHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQHRNQICVTRSTAYVISQYRYMFDLLQRDQRSNNIRSCDIEDYQQQVLDISNSNERYMEEL

Query:  HYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT
        H MY++PIV P  H+GC RV EVEL+EVYHNVE+VPPMTQT
Subjt:  HYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT

TYK02837.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]6.0e-3154.61Show/hide
Query:  WHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQHRNQICVTRSTAYVISQYRYMFDLLQRDQRSNNIRSCDIEDYQQQVLDISNSNERYMEEL
        W    LCK  KRDV +IVG LILLQIWAWE+ PT+A QL H N                ++        RSNN R  D+ +  QQVLDI N+NERYMEE+
Subjt:  WHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQHRNQICVTRSTAYVISQYRYMFDLLQRDQRSNNIRSCDIEDYQQQVLDISNSNERYMEEL

Query:  HYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT
        H MY++PIV P  H+GC RV EVEL+EVYHNVE+VPP TQT
Subjt:  HYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.5e-2640Show/hide
Query:  SEIVGLLILLQIWAWEQLPTMASQLQHRNQICV------TRSTAYVISQYRYMFDLLQRDQ---------------------------------------
        S + GLLILLQIWAWE+  T+A QL H N   +      +R   +V+SQYRYMFDLLQRDQ                                       
Subjt:  SEIVGLLILLQIWAWEQLPTMASQLQHRNQICV------TRSTAYVISQYRYMFDLLQRDQ---------------------------------------

Query:  ---------------------------------RSNNIRSCDIEDYQQQVLDISNSNERYMEELHYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVP
                                         RSNN R  D+ D  QQVL+I N+N+RYMEE+H MY++ IV PPVH+G  RV E EL+EVYHNVE+VP
Subjt:  ---------------------------------RSNNIRSCDIEDYQQQVLDISNSNERYMEELHYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVP

Query:  PMTQT
        P TQT
Subjt:  PMTQT

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.7e-2936.43Show/hide
Query:  GVERVWHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQH---------------RNQICVTRSTAYVISQYRYMFDLLQRDQ-----------
        GV   W    LCK  KRDV +I G LILLQIWAWE+  T+A QL H               R+Q CV RS  YV++QYRYMFDLLQRDQ           
Subjt:  GVERVWHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQH---------------RNQICVTRSTAYVISQYRYMFDLLQRDQ-----------

Query:  --------------------------------------------------------------------------------------RSNNIRSCDIEDYQ
                                                                                              RSNN R  D+ +  
Subjt:  --------------------------------------------------------------------------------------RSNNIRSCDIEDYQ

Query:  QQVLDISNSNERYMEELHYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT
        QQVLDI N+NERYME++H +Y++PIV PPVH+   RV E EL+EVYHNVE+VPP TQT
Subjt:  QQVLDISNSNERYMEELHYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.0e-2840.19Show/hide
Query:  SEIVGLLILLQIWAWEQLPTMASQLQHRN---------------QICVTRSTAYVISQYRYMFDLLQRDQ------------------------------
        S + GLLILLQIWAWE+  T+A QL H N               Q CVTR   +V+SQYRYMFDLLQRDQ                              
Subjt:  SEIVGLLILLQIWAWEQLPTMASQLQHRN---------------QICVTRSTAYVISQYRYMFDLLQRDQ------------------------------

Query:  ------------------------------------------RSNNIRSCDIEDYQQQVLDISNSNERYMEELHYMYNVPIVTPPVHKGCARVGEVELNE
                                                  RSNN R  D+ D  QQVL+I N+N+RYMEE+H MY++ IV PPVH+G  RV E EL+E
Subjt:  ------------------------------------------RSNNIRSCDIEDYQQQVLDISNSNERYMEELHYMYNVPIVTPPVHKGCARVGEVELNE

Query:  VYHNVEKVPPMTQT
        VYHNVE+VPP TQT
Subjt:  VYHNVEKVPPMTQT

A0A5A7V745 Serine/threonine-protein phosphatase 7 long form-like protein5.9e-3255.32Show/hide
Query:  WHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQHRNQICVTRSTAYVISQYRYMFDLLQRDQRSNNIRSCDIEDYQQQVLDISNSNERYMEEL
        W    LCK  KRDV +IVG LILLQIWAWE+ PT+A QL H N                ++        RSNN R  D+ +  QQVLDI N+NERYMEE+
Subjt:  WHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQHRNQICVTRSTAYVISQYRYMFDLLQRDQRSNNIRSCDIEDYQQQVLDISNSNERYMEEL

Query:  HYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT
        H MY++PIV P  H+GC RV EVEL+EVYHNVE+VPPMTQT
Subjt:  HYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT

A0A5D3BTN9 Serine/threonine-protein phosphatase 7 long form-like protein2.9e-3154.61Show/hide
Query:  WHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQHRNQICVTRSTAYVISQYRYMFDLLQRDQRSNNIRSCDIEDYQQQVLDISNSNERYMEEL
        W    LCK  KRDV +IVG LILLQIWAWE+ PT+A QL H N                ++        RSNN R  D+ +  QQVLDI N+NERYMEE+
Subjt:  WHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQHRNQICVTRSTAYVISQYRYMFDLLQRDQRSNNIRSCDIEDYQQQVLDISNSNERYMEEL

Query:  HYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT
        H MY++PIV P  H+GC RV EVEL+EVYHNVE+VPP TQT
Subjt:  HYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.2e-2640Show/hide
Query:  SEIVGLLILLQIWAWEQLPTMASQLQHRNQICV------TRSTAYVISQYRYMFDLLQRDQ---------------------------------------
        S + GLLILLQIWAWE+  T+A QL H N   +      +R   +V+SQYRYMFDLLQRDQ                                       
Subjt:  SEIVGLLILLQIWAWEQLPTMASQLQHRNQICV------TRSTAYVISQYRYMFDLLQRDQ---------------------------------------

Query:  ---------------------------------RSNNIRSCDIEDYQQQVLDISNSNERYMEELHYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVP
                                         RSNN R  D+ D  QQVL+I N+N+RYMEE+H MY++ IV PPVH+G  RV E EL+EVYHNVE+VP
Subjt:  ---------------------------------RSNNIRSCDIEDYQQQVLDISNSNERYMEELHYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVP

Query:  PMTQT
        P TQT
Subjt:  PMTQT

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein2.7e-2936.43Show/hide
Query:  GVERVWHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQH---------------RNQICVTRSTAYVISQYRYMFDLLQRDQ-----------
        GV   W    LCK  KRDV +I G LILLQIWAWE+  T+A QL H               R+Q CV RS  YV++QYRYMFDLLQRDQ           
Subjt:  GVERVWHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQH---------------RNQICVTRSTAYVISQYRYMFDLLQRDQ-----------

Query:  --------------------------------------------------------------------------------------RSNNIRSCDIEDYQ
                                                                                              RSNN R  D+ +  
Subjt:  --------------------------------------------------------------------------------------RSNNIRSCDIEDYQ

Query:  QQVLDISNSNERYMEELHYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT
        QQVLDI N+NERYME++H +Y++PIV PPVH+   RV E EL+EVYHNVE+VPP TQT
Subjt:  QQVLDISNSNERYMEELHYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACAGGTCAATACTCCTGGGGTGGAGCGTGTTTGGCATGGTTGTATGCTATGCAAAATATTGAAGCGAGATGTTAGTGAAATTGTTGGTTTGTTGATACTTCTTCA
AATATGGGCTTGGGAACAACTTCCCACAATGGCTTCACAACTTCAACATAGAAACCAAATTTGTGTAACTAGATCAACTGCTTATGTAATTAGTCAGTATAGGTACATGT
TTGACCTTCTTCAGCGTGATCAGAGATCGAACAACATTAGATCGTGTGATATTGAAGATTATCAACAACAAGTTCTTGATATATCCAATAGTAATGAGAGGTACATGGAG
GAGCTACATTATATGTACAATGTACCTATTGTAACTCCACCAGTTCATAAGGGATGTGCTCGAGTGGGAGAAGTTGAACTCAATGAGGTTTACCATAATGTGGAAAAGGT
GCCTCCTATGACACAGACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGACAGGTCAATACTCCTGGGGTGGAGCGTGTTTGGCATGGTTGTATGCTATGCAAAATATTGAAGCGAGATGTTAGTGAAATTGTTGGTTTGTTGATACTTCTTCA
AATATGGGCTTGGGAACAACTTCCCACAATGGCTTCACAACTTCAACATAGAAACCAAATTTGTGTAACTAGATCAACTGCTTATGTAATTAGTCAGTATAGGTACATGT
TTGACCTTCTTCAGCGTGATCAGAGATCGAACAACATTAGATCGTGTGATATTGAAGATTATCAACAACAAGTTCTTGATATATCCAATAGTAATGAGAGGTACATGGAG
GAGCTACATTATATGTACAATGTACCTATTGTAACTCCACCAGTTCATAAGGGATGTGCTCGAGTGGGAGAAGTTGAACTCAATGAGGTTTACCATAATGTGGAAAAGGT
GCCTCCTATGACACAGACCTAG
Protein sequenceShow/hide protein sequence
MRQVNTPGVERVWHGCMLCKILKRDVSEIVGLLILLQIWAWEQLPTMASQLQHRNQICVTRSTAYVISQYRYMFDLLQRDQRSNNIRSCDIEDYQQQVLDISNSNERYME
ELHYMYNVPIVTPPVHKGCARVGEVELNEVYHNVEKVPPMTQT