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PI0008661 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008661
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr03:16331972..16332205
RNA-Seq ExpressionPI0008661
SyntenyPI0008661
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044273.1 uncharacterized protein E6C27_scaffold2741G00320 [Cucumis melo var. makuwa]2.6e-2270.13Show/hide
Query:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL
        MHFNDEEVKFNVVNAMKF +DD+N + I+S GW Y KE  Y E F+ +EFFE+EDP+YIL+E N +SGERKFESLDL
Subjt:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL

KAA0062395.1 uncharacterized protein E6C27_scaffold154G001730 [Cucumis melo var. makuwa]2.0e-2268.83Show/hide
Query:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL
        MHFN+EE+ FNV+NAMKF  + EN SAIESLGWDYCKE+AY E F+ EEF E+++P YIL+EVN VSGE+KF+ LDL
Subjt:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL

TYJ99671.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]1.8e-2375.32Show/hide
Query:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL
        M FN EEVKFNVVNAMK S D+E    IESLGWDYC+E+AY+E +N EEFFEDEDPSYIL+EVNVVSG++KFE LDL
Subjt:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL

TYK05498.1 uncharacterized protein E5676_scaffold83G002090 [Cucumis melo var. makuwa]1.2e-2270.13Show/hide
Query:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL
        MHFNDEEVKFNVVNAMKF +DD+N + I+S GW Y KE+ Y E F+ +EFFE+EDP+YIL+E N +SGERKFESLDL
Subjt:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL

TYK26585.1 uncharacterized protein E5676_scaffold313G002140 [Cucumis melo var. makuwa]2.0e-2268.83Show/hide
Query:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL
        MHFN+EE+ FNV+NAMKF  + EN SAIESLGWDYCKE+AY E F+ EEF E+++P YIL+EVN VSGE+KF+ LDL
Subjt:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL

TrEMBL top hitse value%identityAlignment
A0A5A7TL87 Uncharacterized protein1.2e-2270.13Show/hide
Query:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL
        MHFNDEEVKFNVVNAMKF +DD+N + I+S GW Y KE  Y E F+ +EFFE+EDP+YIL+E N +SGERKFESLDL
Subjt:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL

A0A5A7V931 Uncharacterized protein9.6e-2368.83Show/hide
Query:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL
        MHFN+EE+ FNV+NAMKF  + EN SAIESLGWDYCKE+AY E F+ EEF E+++P YIL+EVN VSGE+KF+ LDL
Subjt:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL

A0A5D3BLR6 Retrovirus-related Pol polyprotein from transposon 17.68.6e-2475.32Show/hide
Query:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL
        M FN EEVKFNVVNAMK S D+E    IESLGWDYC+E+AY+E +N EEFFEDEDPSYIL+EVNVVSG++KFE LDL
Subjt:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL

A0A5D3C2R8 Uncharacterized protein5.6e-2370.13Show/hide
Query:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL
        MHFNDEEVKFNVVNAMKF +DD+N + I+S GW Y KE+ Y E F+ +EFFE+EDP+YIL+E N +SGERKFESLDL
Subjt:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL

A0A5D3DTC1 Uncharacterized protein9.6e-2368.83Show/hide
Query:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL
        MHFN+EE+ FNV+NAMKF  + EN SAIESLGWDYCKE+AY E F+ EEF E+++P YIL+EVN VSGE+KF+ LDL
Subjt:  MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTTAATGATGAAGAAGTTAAATTCAATGTTGTCAACGCGATGAAGTTCTCTGTCGATGATGAAAATTGCAGCGCGATAGAATCCCTTGGGTGGGATTATTGCAA
GGAAAAAGCGTATAATGAACCGTTCAACCCTGAAGAATTCTTTGAAGATGAAGACCCAAGTTATATTCTGAAAGAGGTGAATGTCGTGTCTGGCGAAAGGAAGTTTGAGT
CTTTGGATCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCACTTTAATGATGAAGAAGTTAAATTCAATGTTGTCAACGCGATGAAGTTCTCTGTCGATGATGAAAATTGCAGCGCGATAGAATCCCTTGGGTGGGATTATTGCAA
GGAAAAAGCGTATAATGAACCGTTCAACCCTGAAGAATTCTTTGAAGATGAAGACCCAAGTTATATTCTGAAAGAGGTGAATGTCGTGTCTGGCGAAAGGAAGTTTGAGT
CTTTGGATCTATAA
Protein sequenceShow/hide protein sequence
MHFNDEEVKFNVVNAMKFSVDDENCSAIESLGWDYCKEKAYNEPFNPEEFFEDEDPSYILKEVNVVSGERKFESLDL