; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008662 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008662
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr07:23170999..23171987
RNA-Seq ExpressionPI0008662
SyntenyPI0008662
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.9e-8075.96Show/hide
Query:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVY
        +A G  IQQFD DVTQEYIH Y NITRLYIT+ GA     RSNN R RDVADD QQVLDICNNN+R+ME+IH MY +PIVPP ++RGRVQVEE ELDEVY
Subjt:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVY

Query:  HNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQEEL
        HNVEE+ P TQ Q+QTGYGSPM+MMPTFG GYCD EV T Y DSG+ PS+SYMDVGPSTSYMHGH H  GEHNEYLY+EAPT V D QEYQQEPENQEEL
Subjt:  HNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQEEL

Query:  GQPRVQSR
         Q RVQSR
Subjt:  GQPRVQSR

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.1e-7883.82Show/hide
Query:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVYHNV
        G SIQQFD DVTQEYIHWYNNITRLYITRP AAVGHLRSNN R RDVADDPQQVL+ICNNN+RYME+IH MYD+ IVPPPV+RGRV+VEE ELDEVYHNV
Subjt:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVYHNV

Query:  EEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYL
        EEVPP TQTQSQTGYGSPM MMPTFGAGY DSEVGTGY D+GI PS+ YMDVGPS  YMHGH  G GEHN+YL
Subjt:  EEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]9.5e-9579.73Show/hide
Query:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVY
        +A   SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN R RDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+RG V+VEE ELD+VY
Subjt:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVY

Query:  HNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQEEL
        HNVEEVP  TQTQSQTGYGSPM MMPTF AGYCD EVG GY D+G+ PS+SY+DV PSTSYMHGH  G GEHNEYLY+EAP +V D QEYQQEPENQE+ 
Subjt:  HNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQEEL

Query:  GQPRVQSRRRQPTRNRRRPGCG
         Q RVQSRRRQPTRNRRRPGCG
Subjt:  GQPRVQSRRRQPTRNRRRPGCG

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.5e-7984.39Show/hide
Query:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVYHNV
        G SIQQFD DVTQEYIHWYNNITRLYITRPGAAVGHLRSNN R RDVADDPQQVL+ICNNN+RYME+IH MYD+ IVPPPV+RGRV+VEE ELDEVYHNV
Subjt:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVYHNV

Query:  EEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYL
        EEVPP TQTQSQTGYGSPM MMPTFGAGY DSEVGTGY D+GI PS+ YMDVGPS  YMHGH  G GEHN+YL
Subjt:  EEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYL

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.0e-9679.02Show/hide
Query:  RFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDE
        RF+    SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN R RDV +DPQQVLDICNNNERYMEKIH +YD+PIVPPPV+R R +VEE ELDE
Subjt:  RFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDE

Query:  VYHNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQE
        VYHNVEEVPP TQTQSQTGYGSPM MMPTFGAGYCDSEV  GY D+ + P +SYMDVGPSTSYM+GHG G GEHNEYLY+EAPT+V D QEYQQEP+NQE
Subjt:  VYHNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQE

Query:  ELGQPRVQSRRRQPTRNRRRPGCG
        +  Q RVQSRRRQP RNR+  GCG
Subjt:  ELGQPRVQSRRRQPTRNRRRPGCG

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-8075.96Show/hide
Query:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVY
        +A G  IQQFD DVTQEYIH Y NITRLYIT+ GA     RSNN R RDVADD QQVLDICNNN+R+ME+IH MY +PIVPP ++RGRVQVEE ELDEVY
Subjt:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVY

Query:  HNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQEEL
        HNVEE+ P TQ Q+QTGYGSPM+MMPTFG GYCD EV T Y DSG+ PS+SYMDVGPSTSYMHGH H  GEHNEYLY+EAPT V D QEYQQEPENQEEL
Subjt:  HNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQEEL

Query:  GQPRVQSR
         Q RVQSR
Subjt:  GQPRVQSR

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.0e-7883.82Show/hide
Query:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVYHNV
        G SIQQFD DVTQEYIHWYNNITRLYITRP AAVGHLRSNN R RDVADDPQQVL+ICNNN+RYME+IH MYD+ IVPPPV+RGRV+VEE ELDEVYHNV
Subjt:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVYHNV

Query:  EEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYL
        EEVPP TQTQSQTGYGSPM MMPTFGAGY DSEVGTGY D+GI PS+ YMDVGPS  YMHGH  G GEHN+YL
Subjt:  EEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYL

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.6e-9579.73Show/hide
Query:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVY
        +A   SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN R RDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+RG V+VEE ELD+VY
Subjt:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVY

Query:  HNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQEEL
        HNVEEVP  TQTQSQTGYGSPM MMPTF AGYCD EVG GY D+G+ PS+SY+DV PSTSYMHGH  G GEHNEYLY+EAP +V D QEYQQEPENQE+ 
Subjt:  HNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQEEL

Query:  GQPRVQSRRRQPTRNRRRPGCG
         Q RVQSRRRQPTRNRRRPGCG
Subjt:  GQPRVQSRRRQPTRNRRRPGCG

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-7984.39Show/hide
Query:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVYHNV
        G SIQQFD DVTQEYIHWYNNITRLYITRPGAAVGHLRSNN R RDVADDPQQVL+ICNNN+RYME+IH MYD+ IVPPPV+RGRV+VEE ELDEVYHNV
Subjt:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDEVYHNV

Query:  EEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYL
        EEVPP TQTQSQTGYGSPM MMPTFGAGY DSEVGTGY D+GI PS+ YMDVGPS  YMHGH  G GEHN+YL
Subjt:  EEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYL

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein2.4e-9679.02Show/hide
Query:  RFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDE
        RF+    SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN R RDV +DPQQVLDICNNNERYMEKIH +YD+PIVPPPV+R R +VEE ELDE
Subjt:  RFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPELDE

Query:  VYHNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQE
        VYHNVEEVPP TQTQSQTGYGSPM MMPTFGAGYCDSEV  GY D+ + P +SYMDVGPSTSYM+GHG G GEHNEYLY+EAPT+V D QEYQQEP+NQE
Subjt:  VYHNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQE

Query:  ELGQPRVQSRRRQPTRNRRRPGCG
        +  Q RVQSRRRQP RNR+  GCG
Subjt:  ELGQPRVQSRRRQPTRNRRRPGCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAACATATATGGCGGACCACCAGTCCTCTCAAGATTCATTGCCACTGGAGCTTCGATTCAGCAATTTGATCAGGATGTGACTCAAGAATACATCCACTGGTATAA
TAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGATTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATA
TATGTAATAATAATGAGAGGTACATGGAGAAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCAAGTGGAAGAACCTGAACTC
GATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAACTTTTGGAGCAGGATATTG
TGATTCTGAGGTCGGTACAGGATATAATGACTCAGGGATCGATCCATCGACTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCG
GAGAACATAACGAATATTTGTACTATGAAGCACCTACAAACGTTCTAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAG
AGTCGACGACGACAACCAACCCGAAATCGAAGACGTCCGGGTTGTGGAATTGATTTTCTTTTATATTTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAACATATATGGCGGACCACCAGTCCTCTCAAGATTCATTGCCACTGGAGCTTCGATTCAGCAATTTGATCAGGATGTGACTCAAGAATACATCCACTGGTATAA
TAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGATTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATA
TATGTAATAATAATGAGAGGTACATGGAGAAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCAAGTGGAAGAACCTGAACTC
GATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAACTTTTGGAGCAGGATATTG
TGATTCTGAGGTCGGTACAGGATATAATGACTCAGGGATCGATCCATCGACTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCG
GAGAACATAACGAATATTTGTACTATGAAGCACCTACAAACGTTCTAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAG
AGTCGACGACGACAACCAACCCGAAATCGAAGACGTCCGGGTTGTGGAATTGATTTTCTTTTATATTTTAAATGA
Protein sequenceShow/hide protein sequence
MVNIYGGPPVLSRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRFRDVADDPQQVLDICNNNERYMEKIHYMYDVPIVPPPVNRGRVQVEEPEL
DEVYHNVEEVPPVTQTQSQTGYGSPMMMMPTFGAGYCDSEVGTGYNDSGIDPSTSYMDVGPSTSYMHGHGHGRGEHNEYLYYEAPTNVLDPQEYQQEPENQEELGQPRVQ
SRRRQPTRNRRRPGCGIDFLLYFK