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PI0008678 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008678
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr01:14083974..14086235
RNA-Seq ExpressionPI0008678
SyntenyPI0008678
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045193.1 hypothetical protein E6C27_scaffold30G001940 [Cucumis melo var. makuwa]7.1e-2353.39Show/hide
Query:  NNNEVPLN-RNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISN
        N N   +N R  N+A   +N IL+AH++N PI  YASP+LY FN GIT+P FG NARF+MK  ML +IQT  QFGG+  EDP DHIKS Y +CSSFH+  
Subjt:  NNNEVPLN-RNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISN

Query:  ITQKELCFALFLLTLRDE
        ++Q++L    F  TL+D+
Subjt:  ITQKELCFALFLLTLRDE

KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]6.0e-2253.06Show/hide
Query:  LNRNNNVA---LGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNIT
        +N  NN A     + N   +AHD+++PI+ YASPNLYDFNPGI +  FG N  FE+K +ML + Q  GQFGGHP EDP+DHI++FY IC+SF++  I+
Subjt:  LNRNNNVA---LGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNIT

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.8e-2655.75Show/hide
Query:  KNNNEVPLNRNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISN
        +NN  +P N+    A    N   +A D +RPIR YASPNLYDFNPGI +P F  N RFE+KL+MLQIIQ  GQF  HP++DPHD+I++FYSIC+SFH+  
Subjt:  KNNNEVPLNRNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISN

Query:  ITQKELCFALFLL
        I+ +EL F  F L
Subjt:  ITQKELCFALFLL

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.0e-2460Show/hide
Query:  NNEVPLNRNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNIT
        NN VPL   N+   GQ N  L+AH+++ PIR Y S NLYDFN GI + VFG NA FE+K +MLQ+IQ  GQF G+  EDPH+HIKSFYSIC+SFH+SN +
Subjt:  NNEVPLNRNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNIT

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]6.5e-2456.44Show/hide
Query:  NSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNITQKELCFALFLLTLRDED
        N I++AHD NRP+R YASPNLY+F PGI  P F  N RFEMK +MLQ++Q  GQFGG   EDPH H+KSF  ICS+F ++ + Q  +   LF  +LRDE 
Subjt:  NSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNITQKELCFALFLLTLRDED

Query:  R
        R
Subjt:  R

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein3.5e-2353.39Show/hide
Query:  NNNEVPLN-RNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISN
        N N   +N R  N+A   +N IL+AH++N PI  YASP+LY FN GIT+P FG NARF+MK  ML +IQT  QFGG+  EDP DHIKS Y +CSSFH+  
Subjt:  NNNEVPLN-RNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISN

Query:  ITQKELCFALFLLTLRDE
        ++Q++L    F  TL+D+
Subjt:  ITQKELCFALFLLTLRDE

A0A5A7UDN8 Uncharacterized protein2.9e-2253.06Show/hide
Query:  LNRNNNVA---LGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNIT
        +N  NN A     + N   +AHD+++PI+ YASPNLYDFNPGI +  FG N  FE+K +ML + Q  GQFGGHP EDP+DHI++FY IC+SF++  I+
Subjt:  LNRNNNVA---LGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNIT

A0A5A7V2U7 Putative disease resistance RPP13-like protein 18.8e-2755.75Show/hide
Query:  KNNNEVPLNRNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISN
        +NN  +P N+    A    N   +A D +RPIR YASPNLYDFNPGI +P F  N RFE+KL+MLQIIQ  GQF  HP++DPHD+I++FYSIC+SFH+  
Subjt:  KNNNEVPLNRNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISN

Query:  ITQKELCFALFLL
        I+ +EL F  F L
Subjt:  ITQKELCFALFLL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 14.8e-2560Show/hide
Query:  NNEVPLNRNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNIT
        NN VPL   N+   GQ N  L+AH+++ PIR Y S NLYDFN GI + VFG NA FE+K +MLQ+IQ  GQF G+  EDPH+HIKSFYSIC+SFH+SN +
Subjt:  NNEVPLNRNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNIT

U5CUI2 Retrotrans_gag domain-containing protein1.0e-1444.55Show/hide
Query:  NSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNITQKELCFALFLLTLRDED
        N I++A D  R IR YA+P   + NPGI  P   A  +FE+K +M Q++QT+GQF G P EDPH H++SF  +  SF I  ++++ L   LF  +LRD  
Subjt:  NSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNITQKELCFALFLLTLRDED

Query:  R
        R
Subjt:  R

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAACAACAACGAAGTCCCTTTGAACAGAAACAACAATGTCGCCCTAGGACAAGACAACTCCATCCTCGTAGCCCATGACGTAAATAGACCCATCAGGGGGTACGC
CTCGCCTAACTTGTATGATTTCAACCCTGGTATCACCTTCCCCGTCTTTGGCGCTAATGCCAGATTCGAGATGAAGTTGATCATGCTTCAGATAATCCAAACTATTGGTC
AGTTCGGGGGACATCCAAAAGAAGACCCACATGACCACATTAAGAGTTTCTACTCAATTTGTTCCTCATTCCACATCTCCAATATTACACAAAAGGAGCTATGTTTTGCA
TTATTCCTGCTTACTCTGAGGGATGAGGACCGAGTCCAATCGAGATTGCAAATAGAGAAAGGGATTTTAAAAGCTCTTGGGCCTTCCCGAGGCTGTGTTTGGTCGAGATT
GGAGGTAGAGAGGTGGTCTGGGAAGGGGTGTGATAGTGGCATTGCAAGGACAGATTACCGCCATGAACAATCTACTGCAATCCATAGCGTTAACGCAAGATGGGGAGGAA
CGAGTCAACAACAACAAGGGCGACAAGGTGACCATGGTGGAGGACGTAACGAAGCATCTGACTATCGCCAAAGACACCATAACAATAGATATATGCAGAAGTACCCACGC
GAGGAAAAAGTCAGGCGAGGAACCATGCGGACAATTAGGCGACTCACAACGCAAAGCAAGGCGATTCTAAGCACTAGCAGACAAACTAGTGTTGAAGACGTCAGAAAGGA
CATATGCGGCATCGCTGCAGCTTGGTCAGAAGAATTAATACCACCAAGTATCCTGTCACATCGCACCTCGCCTATAAATAGCGGTCACTTCTTTAATCACGGACATGCGA
AAATCCGGAGAGCGAGTCCCATTCTTCCACTCTTTTCCTCTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAACAACAACGAAGTCCCTTTGAACAGAAACAACAATGTCGCCCTAGGACAAGACAACTCCATCCTCGTAGCCCATGACGTAAATAGACCCATCAGGGGGTACGC
CTCGCCTAACTTGTATGATTTCAACCCTGGTATCACCTTCCCCGTCTTTGGCGCTAATGCCAGATTCGAGATGAAGTTGATCATGCTTCAGATAATCCAAACTATTGGTC
AGTTCGGGGGACATCCAAAAGAAGACCCACATGACCACATTAAGAGTTTCTACTCAATTTGTTCCTCATTCCACATCTCCAATATTACACAAAAGGAGCTATGTTTTGCA
TTATTCCTGCTTACTCTGAGGGATGAGGACCGAGTCCAATCGAGATTGCAAATAGAGAAAGGGATTTTAAAAGCTCTTGGGCCTTCCCGAGGCTGTGTTTGGTCGAGATT
GGAGGTAGAGAGGTGGTCTGGGAAGGGGTGTGATAGTGGCATTGCAAGGACAGATTACCGCCATGAACAATCTACTGCAATCCATAGCGTTAACGCAAGATGGGGAGGAA
CGAGTCAACAACAACAAGGGCGACAAGGTGACCATGGTGGAGGACGTAACGAAGCATCTGACTATCGCCAAAGACACCATAACAATAGATATATGCAGAAGTACCCACGC
GAGGAAAAAGTCAGGCGAGGAACCATGCGGACAATTAGGCGACTCACAACGCAAAGCAAGGCGATTCTAAGCACTAGCAGACAAACTAGTGTTGAAGACGTCAGAAAGGA
CATATGCGGCATCGCTGCAGCTTGGTCAGAAGAATTAATACCACCAAGTATCCTGTCACATCGCACCTCGCCTATAAATAGCGGTCACTTCTTTAATCACGGACATGCGA
AAATCCGGAGAGCGAGTCCCATTCTTCCACTCTTTTCCTCTTTCTAG
Protein sequenceShow/hide protein sequence
MKNNNEVPLNRNNNVALGQDNSILVAHDVNRPIRGYASPNLYDFNPGITFPVFGANARFEMKLIMLQIIQTIGQFGGHPKEDPHDHIKSFYSICSSFHISNITQKELCFA
LFLLTLRDEDRVQSRLQIEKGILKALGPSRGCVWSRLEVERWSGKGCDSGIARTDYRHEQSTAIHSVNARWGGTSQQQQGRQGDHGGGRNEASDYRQRHHNNRYMQKYPR
EEKVRRGTMRTIRRLTTQSKAILSTSRQTSVEDVRKDICGIAAAWSEELIPPSILSHRTSPINSGHFFNHGHAKIRRASPILPLFSSF