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PI0008689 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008689
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:8336689..8336985
RNA-Seq ExpressionPI0008689
SyntenyPI0008689
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]2.9e-1856.18Show/hide
Query:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIK
        KRNEFL+L QGS+++AEYEKK+T+LS Y+  ++ DE ++C+RFEE LR +IRT VT    W DF KLV+ ALRVE+SL + K+++E  K
Subjt:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIK

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]7.6e-1956.18Show/hide
Query:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIK
        K NEF++L QG+++VAEYEKK+T+LSKY+  ++ DE ++C+RFEE LR +IRT VT    W DF KLV+VALRVE+SL + K+++E  K
Subjt:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIK

XP_038889215.1 uncharacterized protein LOC120079100 [Benincasa hispida]1.7e-1857.83Show/hide
Query:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKK
        K++EFL+L QG+L+V EYE+KFTKL +Y+L ++A+E D+CRRFE  LR +IRT VT++  W DF +LV++A+RVE+SLVDD++
Subjt:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKK

XP_038890030.1 uncharacterized protein LOC120079741 [Benincasa hispida]1.7e-1855.06Show/hide
Query:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIK
        KR+EFL+L QG++SV EYE+KFT+LS+Y+L ++A+E+D+CR+FE+ LR +I+T VT++  W DF +LV+ A RVERSL DD++   G K
Subjt:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIK

XP_038904244.1 uncharacterized protein LOC120090589 [Benincasa hispida]1.7e-1856.98Show/hide
Query:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKE
        KRNEFL+L QG++SVAEYEKK+T+LSKY+++++ D+RD+CRRF++ LR DIRT VT SV   DF +LV+  +RVERS+ + + ++E
Subjt:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKE

TrEMBL top hitse value%identityAlignment
A0A5A7TBS0 CCHC-type domain-containing protein5.3e-1857.3Show/hide
Query:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIK
        KRNEFL+L QGS++VAEYEKK+T+LSKY+  ++ DE ++ +RFEE LR +IRTSVT    W DF KLV+ ALRV +SL + K+++E  K
Subjt:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIK

A0A5A7UZM6 Gag protease polyprotein-like protein1.4e-1856.18Show/hide
Query:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIK
        KRNEFL+L QGS+++AEYEKK+T+LS Y+  ++ DE ++C+RFEE LR +IRT VT    W DF KLV+ ALRVE+SL + K+++E  K
Subjt:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIK

A0A5D3BB91 Reverse transcriptase3.7e-1956.18Show/hide
Query:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIK
        K NEF++L QG+++VAEYEKK+T+LSKY+  ++ DE ++C+RFEE LR +IRT VT    W DF KLV+VALRVE+SL + K+++E  K
Subjt:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIK

A0A5D3BBS3 DNA/RNA polymerases superfamily protein5.3e-1856.98Show/hide
Query:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKE
        KR+EFL L QGSLSVAEYE+K+T+LS+Y+  +VA E D+CRRFE  LR +IRT +TT   W +F +LV+ ALRVE+S+ ++K   E
Subjt:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKE

A0A5D3DIE3 Retrotrans_gag domain-containing protein3.1e-1855.21Show/hide
Query:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKE---GIKQPSG
        KR+EFLQL QGSLSVAEYE+K+T+LS+ +  +VA E D+CRRFE  LR +IRT VT    W +F +LV++ALRVE+S+V++K   E   G+   SG
Subjt:  KRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKE---GIKQPSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAAAGGAATGAGTTTTTGCAGTTGCCACAAGGTAGCTTGTCAGTGGCAGAGTACGAGAAGAAGTTTACAAAATTGTCTAAGTATTCATTGGCATTAGTGGCTGA
CGAGAGAGATAAGTGTAGAAGGTTTGAAGAAAGACTAAGGATGGACATACGAACCTCAGTGACAACAAGTGTTGCATGGGAAGATTTCTTAAAGTTGGTAGATGTTGCAT
TGAGAGTAGAAAGAAGTTTAGTTGACGATAAGAAAAAAAAAGAAGGAATTAAGCAACCAAGTGGAACACATAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAAAGGAATGAGTTTTTGCAGTTGCCACAAGGTAGCTTGTCAGTGGCAGAGTACGAGAAGAAGTTTACAAAATTGTCTAAGTATTCATTGGCATTAGTGGCTGA
CGAGAGAGATAAGTGTAGAAGGTTTGAAGAAAGACTAAGGATGGACATACGAACCTCAGTGACAACAAGTGTTGCATGGGAAGATTTCTTAAAGTTGGTAGATGTTGCAT
TGAGAGTAGAAAGAAGTTTAGTTGACGATAAGAAAAAAAAAGAAGGAATTAAGCAACCAAGTGGAACACATAGATAG
Protein sequenceShow/hide protein sequence
MRKRNEFLQLPQGSLSVAEYEKKFTKLSKYSLALVADERDKCRRFEERLRMDIRTSVTTSVAWEDFLKLVDVALRVERSLVDDKKKKEGIKQPSGTHR