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PI0008692 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008692
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr07:17281231..17284999
RNA-Seq ExpressionPI0008692
SyntenyPI0008692
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040603.1 uncharacterized protein E6C27_scaffold262G001800 [Cucumis melo var. makuwa]1.4e-3162.1Show/hide
Query:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDPN
        MVHLYVNVSR  LDINLNSEPFG  E+RT V+ P+SE V SS+ DDEE+V NNEY DFRTETDDEFEEFDFDG EHELPSNT TQ+DM+VID+I   +P 
Subjt:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDPN

Query:  ILY----DQSFHRSTIVWDDRTVE
        +++    +   ++  I  D  T++
Subjt:  ILY----DQSFHRSTIVWDDRTVE

KAA0060519.1 uncharacterized protein E6C27_scaffold22G003730 [Cucumis melo var. makuwa]5.6e-3376.77Show/hide
Query:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDP
        MVHLYVNVSR  LDIN+NSEPFG  ED+T V+ P++E VASS+ DDEEMVANNEY DF+TETDDEFEEFDFDGREHELPSNT TQ++M+VID+IR  DP
Subjt:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDP

KAA0062731.1 uncharacterized protein E6C27_scaffold382G00620 [Cucumis melo var. makuwa]1.1e-3161.29Show/hide
Query:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIR----L
        MVHLYVNVSR  LDINLNSEPFG  EDR  V+ P++E VAS + +DEEMVANNEY DFRTET+D+FEEFDFDG EHELPSNT TQ+DM+VID+IR    +
Subjt:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIR----L

Query:  IDPNILYDQSFHRSTIVWDDRTVE
        + P ++ +   ++  I  D  T++
Subjt:  IDPNILYDQSFHRSTIVWDDRTVE

KAA0066696.1 uncharacterized protein E6C27_scaffold271G00290 [Cucumis melo var. makuwa]2.8e-3277.78Show/hide
Query:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDP
        MVHLYVNVSR  LDINLNSEPF   EDRT V+ P+SE VASS+ DDEEMVANNEY DF+TE DDEFEEFDFDGREHELP NT TQ+DM+VID+IR  DP
Subjt:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDP

TYK01570.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.8e-4349.4Show/hide
Query:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDPN
        MVHLYV VS     INLN EP    E     VD   E  A  +  +EEMVA NEY +FRTETDDEFEE DFDG E+E+PSNTFT LDMN +D I+  DP 
Subjt:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDPN

Query:  ILYDQSFH-RSTIVWDDRTVE-----------------FSGLDDDADEESVIRY---ARAYILQLMGGSLFSDKSGRSNNRRLRDVADDPQQVFDICNNN
        I+   + + + T  W DR                        D D  +E    Y   ++ YI QL  G+  S    RSNN RLR+VADDPQQV +ICN+N
Subjt:  ILYDQSFH-RSTIVWDDRTVE-----------------FSGLDDDADEESVIRY---ARAYILQLMGGSLFSDKSGRSNNRRLRDVADDPQQVFDICNNN

Query:  ERYMEEIHYMYDVTIVPPPVNRGRVRVEEP-ELDEVYDNVEEVPPVTQT
        E+YME IHYMYDV IVP PV R R  V+EP +L+EV  + EEVPP+T+T
Subjt:  ERYMEEIHYMYDVTIVPPPVNRGRVRVEEP-ELDEVYDNVEEVPPVTQT

TrEMBL top hitse value%identityAlignment
A0A5A7V456 Uncharacterized protein2.7e-3376.77Show/hide
Query:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDP
        MVHLYVNVSR  LDIN+NSEPFG  ED+T V+ P++E VASS+ DDEEMVANNEY DF+TETDDEFEEFDFDGREHELPSNT TQ++M+VID+IR  DP
Subjt:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDP

A0A5A7VAN3 Uncharacterized protein5.1e-3261.29Show/hide
Query:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIR----L
        MVHLYVNVSR  LDINLNSEPFG  EDR  V+ P++E VAS + +DEEMVANNEY DFRTET+D+FEEFDFDG EHELPSNT TQ+DM+VID+IR    +
Subjt:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIR----L

Query:  IDPNILYDQSFHRSTIVWDDRTVE
        + P ++ +   ++  I  D  T++
Subjt:  IDPNILYDQSFHRSTIVWDDRTVE

A0A5D3BR52 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.8e-4349.4Show/hide
Query:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDPN
        MVHLYV VS     INLN EP    E     VD   E  A  +  +EEMVA NEY +FRTETDDEFEE DFDG E+E+PSNTFT LDMN +D I+  DP 
Subjt:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDPN

Query:  ILYDQSFH-RSTIVWDDRTVE-----------------FSGLDDDADEESVIRY---ARAYILQLMGGSLFSDKSGRSNNRRLRDVADDPQQVFDICNNN
        I+   + + + T  W DR                        D D  +E    Y   ++ YI QL  G+  S    RSNN RLR+VADDPQQV +ICN+N
Subjt:  ILYDQSFH-RSTIVWDDRTVE-----------------FSGLDDDADEESVIRY---ARAYILQLMGGSLFSDKSGRSNNRRLRDVADDPQQVFDICNNN

Query:  ERYMEEIHYMYDVTIVPPPVNRGRVRVEEP-ELDEVYDNVEEVPPVTQT
        E+YME IHYMYDV IVP PV R R  V+EP +L+EV  + EEVPP+T+T
Subjt:  ERYMEEIHYMYDVTIVPPPVNRGRVRVEEP-ELDEVYDNVEEVPPVTQT

A0A5D3C2N3 Uncharacterized protein6.7e-3262.1Show/hide
Query:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDPN
        MVHLYVNVSR  LDINLNSEPFG  E+RT V+ P+SE V SS+ DDEE+V NNEY DFRTETDDEFEEFDFDG EHELPSNT TQ+DM+VID+I   +P 
Subjt:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDPN

Query:  ILY----DQSFHRSTIVWDDRTVE
        +++    +   ++  I  D  T++
Subjt:  ILY----DQSFHRSTIVWDDRTVE

A0A5D3DVS6 Uncharacterized protein1.3e-3277.78Show/hide
Query:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDP
        MVHLYVNVSR  LDINLNSEPF   EDRT V+ P+SE VASS+ DDEEMVANNEY DF+TE DDEFEEFDFDGREHELP NT TQ+DM+VID+IR  DP
Subjt:  MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCATCTATATGTGAATGTAAGCAGGACGAGTTTGGATATAAACTTGAATTCTGAACCATTCGGTCCGTTTGAAGACCGAACTCATGTTGTTGACCCTAATTCAGA
ACCAGTTGCGTCGTCGATAAACGACGATGAAGAAATGGTGGCCAATAATGAATATAGGGACTTTCGAACAGAAACGGACGATGAGTTTGAAGAGTTTGACTTTGACGGTC
GTGAACATGAATTGCCGTCAAATACATTCACTCAATTAGATATGAATGTAATAGACAATATTCGACTGATTGATCCTAATATTTTGTATGATCAATCTTTCCATCGATCT
ACGATTGTATGGGACGATAGAACGGTTGAATTTTCGGGACTTGATGATGATGCAGACGAGGAAAGTGTCATCAGATATGCAAGAGCATACATTCTACAACTAATGGGTGG
GAGTCTATTTTCTGACAAATCGGGTCGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCGCAACAAGTCTTTGATATATGTAATAATAATGAGAGGTACATGG
AGGAGATACATTATATGTATGATGTAACTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTATGATAACGTAGAAGAA
GTACCTCCAGTGACACAAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCATCTATATGTGAATGTAAGCAGGACGAGTTTGGATATAAACTTGAATTCTGAACCATTCGGTCCGTTTGAAGACCGAACTCATGTTGTTGACCCTAATTCAGA
ACCAGTTGCGTCGTCGATAAACGACGATGAAGAAATGGTGGCCAATAATGAATATAGGGACTTTCGAACAGAAACGGACGATGAGTTTGAAGAGTTTGACTTTGACGGTC
GTGAACATGAATTGCCGTCAAATACATTCACTCAATTAGATATGAATGTAATAGACAATATTCGACTGATTGATCCTAATATTTTGTATGATCAATCTTTCCATCGATCT
ACGATTGTATGGGACGATAGAACGGTTGAATTTTCGGGACTTGATGATGATGCAGACGAGGAAAGTGTCATCAGATATGCAAGAGCATACATTCTACAACTAATGGGTGG
GAGTCTATTTTCTGACAAATCGGGTCGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCGCAACAAGTCTTTGATATATGTAATAATAATGAGAGGTACATGG
AGGAGATACATTATATGTATGATGTAACTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTATGATAACGTAGAAGAA
GTACCTCCAGTGACACAAACATAG
Protein sequenceShow/hide protein sequence
MVHLYVNVSRTSLDINLNSEPFGPFEDRTHVVDPNSEPVASSINDDEEMVANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTQLDMNVIDNIRLIDPNILYDQSFHRS
TIVWDDRTVEFSGLDDDADEESVIRYARAYILQLMGGSLFSDKSGRSNNRRLRDVADDPQQVFDICNNNERYMEEIHYMYDVTIVPPPVNRGRVRVEEPELDEVYDNVEE
VPPVTQT