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PI0008700 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008700
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr11:9923262..9924080
RNA-Seq ExpressionPI0008700
SyntenyPI0008700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK21794.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]3.0e-0440Show/hide
Query:  MTITYPSCPSPVCLSKYLCLQKLNIEGGEYTNILSKGNATVKLGFELLSSYGVSCRYKQSRNSEKVPQ-YSLA-VPKDSPNQSSAPEGCTHQSGGPKDTP
        M  T+PSC S VC S+YLCL+K+  +G  Y        ++   G+   SS    C Y+ S      P+ YS++ VP+    QSS PEGCT+QS  P+   
Subjt:  MTITYPSCPSPVCLSKYLCLQKLNIEGGEYTNILSKGNATVKLGFELLSSYGVSCRYKQSRNSEKVPQ-YSLA-VPKDSPNQSSAPEGCTHQSGGPKDTP

Query:  NQSGDPEGYT
        + S DPEG T
Subjt:  NQSGDPEGYT
TrEMBL top hitse value%identityAlignment
A0A5D3DDZ3 NBS-LRR type resistance protein1.5e-0440Show/hide
Query:  MTITYPSCPSPVCLSKYLCLQKLNIEGGEYTNILSKGNATVKLGFELLSSYGVSCRYKQSRNSEKVPQ-YSLA-VPKDSPNQSSAPEGCTHQSGGPKDTP
        M  T+PSC S VC S+YLCL+K+  +G  Y        ++   G+   SS    C Y+ S      P+ YS++ VP+    QSS PEGCT+QS  P+   
Subjt:  MTITYPSCPSPVCLSKYLCLQKLNIEGGEYTNILSKGNATVKLGFELLSSYGVSCRYKQSRNSEKVPQ-YSLA-VPKDSPNQSSAPEGCTHQSGGPKDTP

Query:  NQSGDPEGYT
        + S DPEG T
Subjt:  NQSGDPEGYT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCTCAGCTCGCGAACAGGGGAGGCTGGCTAAACGCTAGGGCTGTTCGCGGACAGAGGGAGCTGCCAACAGAAGGGGATTTACTTCGCGGAATAGCAAGAAGTCA
AAACAGAATGCGGAGAAGAAAGCTAGGCGAGATGGAGAAAGAGCTTTCAGTGAACTCACCTGCGAAGGGCACACTATGGGGTAAAGCTTGGCAAAAGTGTAACGACCCGA
CTTTCGAAGACACAAGACCGTTACCACGACTCCAAAATTCCAAAATGGACACGAAAGACATAACCAAAACGGCGGAAGCGACGACGACGCCCATGACCATCACATATCCT
TCCTGCCCCTCGCCGGTCTGCCTCTCGAAATACCTTTGCCTGCAGAAGTTAAACATAGAAGGGGGTGAGTATACAAATATACTCAGTAAGGGAAACGCTACAGTCAAGCT
AGGGTTCGAACTGTTATCTTCCTATGGGGTGTCCTGCAGATATAAACAGTCAAGGAATTCCGAAAAAGTTCCACAATACAGTCTGGCGGTCCCGAAGGACTCACCTAATC
AGTCTAGTGCTCCCGAAGGATGCACCCATCAGTCTGGTGGCCCGAAGGACACACCTAATCAGTCTGGTGATCCCGAAGGATACACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACCTCAGCTCGCGAACAGGGGAGGCTGGCTAAACGCTAGGGCTGTTCGCGGACAGAGGGAGCTGCCAACAGAAGGGGATTTACTTCGCGGAATAGCAAGAAGTCA
AAACAGAATGCGGAGAAGAAAGCTAGGCGAGATGGAGAAAGAGCTTTCAGTGAACTCACCTGCGAAGGGCACACTATGGGGTAAAGCTTGGCAAAAGTGTAACGACCCGA
CTTTCGAAGACACAAGACCGTTACCACGACTCCAAAATTCCAAAATGGACACGAAAGACATAACCAAAACGGCGGAAGCGACGACGACGCCCATGACCATCACATATCCT
TCCTGCCCCTCGCCGGTCTGCCTCTCGAAATACCTTTGCCTGCAGAAGTTAAACATAGAAGGGGGTGAGTATACAAATATACTCAGTAAGGGAAACGCTACAGTCAAGCT
AGGGTTCGAACTGTTATCTTCCTATGGGGTGTCCTGCAGATATAAACAGTCAAGGAATTCCGAAAAAGTTCCACAATACAGTCTGGCGGTCCCGAAGGACTCACCTAATC
AGTCTAGTGCTCCCGAAGGATGCACCCATCAGTCTGGTGGCCCGAAGGACACACCTAATCAGTCTGGTGATCCCGAAGGATACACCTAA
Protein sequenceShow/hide protein sequence
MTPQLANRGGWLNARAVRGQRELPTEGDLLRGIARSQNRMRRRKLGEMEKELSVNSPAKGTLWGKAWQKCNDPTFEDTRPLPRLQNSKMDTKDITKTAEATTTPMTITYP
SCPSPVCLSKYLCLQKLNIEGGEYTNILSKGNATVKLGFELLSSYGVSCRYKQSRNSEKVPQYSLAVPKDSPNQSSAPEGCTHQSGGPKDTPNQSGDPEGYT