CuGenDBv2

Gene ID	PI0008716
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Chromatin assembly factor 1 subunit A
Genome location	chr06:2549465..2552580
RNA-Seq Expression	PI0008716
Synteny	PI0008716
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004133989.1 chromatin assembly factor 1 subunit A [Cucumis sativus]

8.0e-81

90.67

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Query:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK
        MAFASGS IR ATN+SNNLLRSFSTSIK+A HNNHL T EYLEAN+FIGSW+APK+P+EAQARLARLRREYAKQVKQVRKNYI EVELLRLE+EQKD+AK
Subjt:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK

Query:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAKVRAEERKVADEEFRLTL+KERAEKLEHWRMMEKKREEKKKEKKELLRRQSS+WVDEN LEEKLLEAIVNTITL
Subjt:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

XP_008438350.1 PREDICTED: LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A [Cucumis melo]

1.1e-82

91.71

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Query:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK
        MAFASGS IR ATN+SNNLLRSFSTSIKSAH+NNHL THEYLEAN+FIGSW+APKDP+EAQARLARLRREYAKQVKQVRKNYI EVELLRLEKEQKD+AK
Subjt:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK

Query:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL
        REALRVANEERKKLKAEAAKVRAEERK+ADEEFRLTLMKERAEKLEHWRMMEKKREEK KEKKELLRRQSS W+DEN LEEKLLEAIVNT+TL
Subjt:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

XP_022924252.1 UPF0329 protein ECU05_1680/ECU11_0050-like [Cucurbita moschata]

5.0e-75

84.97

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Query:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK
        MA  S SAIRTATNVSNNLLRSFSTSIKSAHHNNH  TH+YLEA+ F+GSWEAPKDP+EAQA+LA LRR+YAKQVKQVRKNYI EVE+LRLEK++KD+AK
Subjt:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK

Query:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL
        REALRVANEERKKLKAEAAK RAEERKVADEEFR TLMKER EKLEHWRMMEKKREEKKKEK E +RRQSS+WVDE  LEEKLL+AIVNTI L
Subjt:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

XP_022980429.1 uncharacterized protein LOC111479798 [Cucurbita maxima]

1.1e-74

84.46

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Query:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK
        MA  S SAIR+ATN+SNNLLRSFSTSIKSAHHNNH  TH+YLEA+ F+GSWEAPKDP+EAQA+LA LRR+YAKQVKQVRKNYI EVELLRLEK+ KD+AK
Subjt:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK

Query:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL
        REALRVANEERKKLKAEAAK RAEERKVADEEFR TLMKER EKLEHWRMMEKKREEKKKEK E++RRQSS+WVDE  LEEKLL+AIVNTI L
Subjt:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

XP_038892259.1 chromatin assembly factor 1 subunit A [Benincasa hispida]

2.7e-76

86.01

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Query:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK
        MAF   SAIRTAT++SNNLLRS STS KSAHHNNH  TH+YLEAN FIGSWEAPKDP+EAQA+LA+LRR+YAKQ+KQVRKNYI EVELLRLEKE+KD+AK
Subjt:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK

Query:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL
        REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKR+EKKKEK +LLRRQSS+WVDEN LEEKLL+AIVNT  L
Subjt:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7X4 Uncharacterized protein

3.9e-81

90.67

Show/hide

Query:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK
        MAFASGS IR ATN+SNNLLRSFSTSIK+A HNNHL T EYLEAN+FIGSW+APK+P+EAQARLARLRREYAKQVKQVRKNYI EVELLRLE+EQKD+AK
Subjt:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK

Query:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL
        +EALRVANEERKKLKAEAAKVRAEERKVADEEFRLTL+KERAEKLEHWRMMEKKREEKKKEKKELLRRQSS+WVDEN LEEKLLEAIVNTITL
Subjt:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

A0A1S3AWS6 LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A

5.4e-83

91.71

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Query:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK
        MAFASGS IR ATN+SNNLLRSFSTSIKSAH+NNHL THEYLEAN+FIGSW+APKDP+EAQARLARLRREYAKQVKQVRKNYI EVELLRLEKEQKD+AK
Subjt:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK

Query:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL
        REALRVANEERKKLKAEAAKVRAEERK+ADEEFRLTLMKERAEKLEHWRMMEKKREEK KEKKELLRRQSS W+DEN LEEKLLEAIVNT+TL
Subjt:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

A0A6J1E8D4 UPF0329 protein ECU05_1680/ECU11_0050-like

2.4e-75

84.97

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Query:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK
        MA  S SAIRTATNVSNNLLRSFSTSIKSAHHNNH  TH+YLEA+ F+GSWEAPKDP+EAQA+LA LRR+YAKQVKQVRKNYI EVE+LRLEK++KD+AK
Subjt:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK

Query:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL
        REALRVANEERKKLKAEAAK RAEERKVADEEFR TLMKER EKLEHWRMMEKKREEKKKEK E +RRQSS+WVDE  LEEKLL+AIVNTI L
Subjt:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

A0A6J1FLI1 UPF0329 protein ECU05_1680/ECU11_0050-like

5.6e-72

82.38

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Query:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK
        MAFAS SAIR ATN S+ LLRSFSTS KSAHHNNH  TH+YLEAN F+GSWEAPKDP+EAQARLA LRR+YAK+VKQVRKNYI EVELLRLEK++KD+AK
Subjt:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK

Query:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL
        REALRV NEERKKLKAEAAK RAEERKVADEEFR TLMKERAEKLEHWRMMEK REEKK EK EL+RRQS +W+DE  LEEKLL+AIVNT  L
Subjt:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

A0A6J1IZ92 uncharacterized protein LOC111479798

5.4e-75

84.46

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Query:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK
        MA  S SAIR+ATN+SNNLLRSFSTSIKSAHHNNH  TH+YLEA+ F+GSWEAPKDP+EAQA+LA LRR+YAKQVKQVRKNYI EVELLRLEK+ KD+AK
Subjt:  MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAK

Query:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL
        REALRVANEERKKLKAEAAK RAEERKVADEEFR TLMKER EKLEHWRMMEKKREEKKKEK E++RRQSS+WVDE  LEEKLL+AIVNTI L
Subjt:  REALRVANEERKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G49210.1 unknown protein

3.6e-47

60.34

Show/hide

Query:  LRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAKREALRVANEERKKLKAEAA
        LRSFS    + HH  H  TH +LE   +IGSWEAP DP++A+ +LA+LRR+YAK+V+  RK YI E+E+LR+EK++KD+A+  A R ANEER+ LKAEAA
Subjt:  LRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAKREALRVANEERKKLKAEAA

Query:  KVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL
        KVRAEERK+ADEEFR TL+KERAEKLE W+MM +KREEK KE+++LLR QSS+W+++  LE K+ EA+V+ + L
Subjt:  KVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

AT5G49210.2 unknown protein

3.6e-47

60.34

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Query:  LRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAKREALRVANEERKKLKAEAA
        LRSFS    + HH  H  TH +LE   +IGSWEAP DP++A+ +LA+LRR+YAK+V+  RK YI E+E+LR+EK++KD+A+  A R ANEER+ LKAEAA
Subjt:  LRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAKREALRVANEERKKLKAEAA

Query:  KVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL
        KVRAEERK+ADEEFR TL+KERAEKLE W+MM +KREEK KE+++LLR QSS+W+++  LE K+ EA+V+ + L
Subjt:  KVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTTTGCGTCTGGTTCCGCGATCCGCACTGCAACCAATGTCTCTAATAACCTTCTTCGTTCCTTCTCCACTTCCATCAAATCCGCTCACCATAACAATCACCTGCA
CACCCACGAATACTTGGAGGCGAACACCTTTATTGGTAGCTGGGAGGCGCCGAAAGACCCCAGGGAAGCGCAGGCCAGACTTGCAAGGCTCCGAAGGGAGTACGCCAAGC
AGGTGAAACAGGTACGTAAGAATTACATCGGGGAGGTTGAACTCTTGAGGCTCGAAAAGGAGCAGAAGGACAAAGCCAAGAGAGAAGCGCTTAGGGTTGCCAATGAGGAA
CGCAAGAAGCTTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGACGAAGAGTTCCGACTGACTTTGATGAAAGAAAGAGCTGAGAAGCTGGAGCA
TTGGAGAATGATGGAAAAGAAGAGGGAAGAAAAAAAGAAAGAAAAGAAGGAGCTACTAAGACGGCAGAGTTCTATATGGGTTGATGAAAATACATTGGAAGAGAAGCTAT
TAGAAGCCATTGTTAATACCATCACTCTCTGA

mRNA sequence

Show/hide mRNA sequence

CAACCGTTCCCATCTTAGTTCTCTCTCTACTCTCACTTCCCAAGCTGCCATTTGCAAAATGCTTTCATCTCGAGCTCTATGATCAACCTTTTGTTTTTTTTGCTCTTCAA
TTCGAAATTTCGAAATCTTGTCTAATCCAACCTATTTTTGTTCGATTTTTTTTTCAAATCGTTTTGATTTTGAAGCCCAGAAGCTTGTGCGACATCGATGGCGTTTGCGT
CTGGTTCCGCGATCCGCACTGCAACCAATGTCTCTAATAACCTTCTTCGTTCCTTCTCCACTTCCATCAAATCCGCTCACCATAACAATCACCTGCACACCCACGAATAC
TTGGAGGCGAACACCTTTATTGGTAGCTGGGAGGCGCCGAAAGACCCCAGGGAAGCGCAGGCCAGACTTGCAAGGCTCCGAAGGGAGTACGCCAAGCAGGTGAAACAGGT
ACGTAAGAATTACATCGGGGAGGTTGAACTCTTGAGGCTCGAAAAGGAGCAGAAGGACAAAGCCAAGAGAGAAGCGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTA
AAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGACGAAGAGTTCCGACTGACTTTGATGAAAGAAAGAGCTGAGAAGCTGGAGCATTGGAGAATGATG
GAAAAGAAGAGGGAAGAAAAAAAGAAAGAAAAGAAGGAGCTACTAAGACGGCAGAGTTCTATATGGGTTGATGAAAATACATTGGAAGAGAAGCTATTAGAAGCCATTGT
TAATACCATCACTCTCTGAGCTTTCTTACTTTCCAGTGATAATTGCCCAACTTTCTCTTACGTTTCTTTGTTAGAAGCAATTTTCATTTACTGGATTCTAGCTGATAAGT
TTCTGCCTAATCCAAGGTTTTGACTCTTGTGATGAAGCACTCAACATCTTGCATACGGTGGTACCTTTTTGTTACAATTATTATTATCATTAGGGAAAAAATCAGTTTCT
ACTCTTCGATGTTGTAGCAATTATAACTTCAAACTAATAATTCAATCAATTTAGAACATGTTTGTAACAATAATTCAATCAATTTAGAACATGTTT

Protein sequence

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MAFASGSAIRTATNVSNNLLRSFSTSIKSAHHNNHLHTHEYLEANTFIGSWEAPKDPREAQARLARLRREYAKQVKQVRKNYIGEVELLRLEKEQKDKAKREALRVANEE
RKKLKAEAAKVRAEERKVADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSIWVDENTLEEKLLEAIVNTITL

PI0008716 (gene) of Melon (PI 482460) v1 genome