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PI0008717 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008717
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:13950035..13950574
RNA-Seq ExpressionPI0008717
SyntenyPI0008717
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]1.5e-3360.68Show/hide
Query:  SSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGMDKSVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNT
        SSYNQI  TLD++A NNEEWD+D F +HRGGR + +EG+D++V+V  QGQMTAMNNLL+ M   QVNAA SS  +  Q+D++GC+  G PH  DACPLN 
Subjt:  SSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGMDKSVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNT

Query:  ETVAFVRNDPFSSTYNP
        E VA+V++DP+S+TYNP
Subjt:  ETVAFVRNDPFSSTYNP

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]2.1e-5157.06Show/hide
Query:  MSFQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNH------RGGRS
        M+F+Q+DRENL DVW RFKRM+K CPH+ IPEC++ME FYF L+K T Q+A+ VF GGML+SSYNQIK  LDTMASN++EW ++ FG+       +G R 
Subjt:  MSFQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNH------RGGRS

Query:  RGDEGMDKSVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNTETVAFVRNDP
        R ++G+D S++VALQGQ+  M N+L+SM + QVN   SS+    Q++++GCVGC  PH+T+ACPLNTE VA+++NDP
Subjt:  RGDEGMDKSVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNTETVAFVRNDP

KAA0061983.1 uncharacterized protein E6C27_scaffold89G002850 [Cucumis melo var. makuwa]3.2e-3141.48Show/hide
Query:  FQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGMDK
        F+Q+DR+NLHD WS FKRMVKAC H+GI + ++ME FYF L+K T+Q+AD++F+GG+L+SSYNQIKA LD+MA+N+++                      
Subjt:  FQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGMDK

Query:  SVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNTETVAFVRNDPFSSTYNP
                                      S HA   ++++ C GCGGPH+TDACPLN E VA+V+ DP      P
Subjt:  SVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNTETVAFVRNDPFSSTYNP

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]6.6e-4564.54Show/hide
Query:  MSFQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGM
        M F+Q+D+EN+HD WSRFKR+VKACP +GIPEC+ MEVFYF L+K T Q  + +FVGGML+SSYNQIKATLD+M++N++EWD+  FG+   GR++  EG+
Subjt:  MSFQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGM

Query:  DKSVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQID
        DKSVVV LQGQM AMNNLL+SMT+SQVNAA + +HA  Q++
Subjt:  DKSVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQID

XP_038874978.1 putative uncharacterized protein DDB_G0279653 [Benincasa hispida]2.5e-2837.36Show/hide
Query:  MSFQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEG-
        ++F+Q D E L   W  F+R+VK  PH GI  C++ME FY  LN++TQ  ADA  VGG +  +Y + K  LD ++ N ++W +D +G     R R D   
Subjt:  MSFQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEG-

Query:  MDKSVVVALQGQMTAMNNLLKSMTISQ--VNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNTETVAFVRNDPFSSTYNPG
        +    +  L  QM A+ +LL++M I+Q  ++ + +  +A  Q+  + CV  GG H  + CP N ++V  ++N+P+S+TYNPG
Subjt:  MDKSVVVALQGQMTAMNNLLKSMTISQ--VNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNTETVAFVRNDPFSSTYNPG

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein3.2e-4564.54Show/hide
Query:  MSFQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGM
        M F+Q+D+EN+HD WSRFKR+VKACP +GIPEC+ MEVFYF L+K T Q  + +FVGGML+SSYNQIKATLD+M++N++EWD+  FG+   GR++  EG+
Subjt:  MSFQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGM

Query:  DKSVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQID
        DKSVVV LQGQM AMNNLL+SMT+SQVNAA + +HA  Q++
Subjt:  DKSVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQID

A0A5A7TUE1 Uncharacterized protein4.6e-2855.83Show/hide
Query:  FQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHR-GGRSRG--DEG
        F+ +DRENL+D WS  KR+VKAC H+GI +C++ME FYFRL++  QQT D VFVGG+L++SYNQ K  LDTM SN++E  +D   + +  G +RG  DEG
Subjt:  FQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHR-GGRSRG--DEG

Query:  MDKSVVVALQGQMTAMNNLL
        MD++ +V LQGQ+T MN LL
Subjt:  MDKSVVVALQGQMTAMNNLL

A0A5A7V1F3 Retrotrans_gag domain-containing protein1.5e-3141.48Show/hide
Query:  FQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGMDK
        F+Q+DR+NLHD WS FKRMVKAC H+GI + ++ME FYF L+K T+Q+AD++F+GG+L+SSYNQIKA LD+MA+N+++                      
Subjt:  FQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGMDK

Query:  SVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNTETVAFVRNDPFSSTYNP
                                      S HA   ++++ C GCGGPH+TDACPLN E VA+V+ DP      P
Subjt:  SVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNTETVAFVRNDPFSSTYNP

A0A5D3CC26 Uncharacterized protein1.0e-5157.06Show/hide
Query:  MSFQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNH------RGGRS
        M+F+Q+DRENL DVW RFKRM+K CPH+ IPEC++ME FYF L+K T Q+A+ VF GGML+SSYNQIK  LDTMASN++EW ++ FG+       +G R 
Subjt:  MSFQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNH------RGGRS

Query:  RGDEGMDKSVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNTETVAFVRNDP
        R ++G+D S++VALQGQ+  M N+L+SM + QVN   SS+    Q++++GCVGC  PH+T+ACPLNTE VA+++NDP
Subjt:  RGDEGMDKSVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNTETVAFVRNDP

A0A5D3CSC7 Uncharacterized protein7.4e-3460.68Show/hide
Query:  SSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGMDKSVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNT
        SSYNQI  TLD++A NNEEWD+D F +HRGGR + +EG+D++V+V  QGQMTAMNNLL+ M   QVNAA SS  +  Q+D++GC+  G PH  DACPLN 
Subjt:  SSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGMDKSVVVALQGQMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNT

Query:  ETVAFVRNDPFSSTYNP
        E VA+V++DP+S+TYNP
Subjt:  ETVAFVRNDPFSSTYNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTCCAACAGAAGGATAGAGAAAACCTACATGACGTGTGGAGTAGGTTTAAGAGGATGGTGAAAGCATGCCCCCACAATGGCATTCCTGAATGCATAATGATGGA
GGTTTTCTATTTTAGGCTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGTTTGTAGGCGGTATGCTTAAGAGCTCTTACAACCAGATTAAGGCGACACTGGACACAA
TGGCCAGCAACAATGAAGAATGGGATGAAGATGATTTCGGTAATCACCGAGGAGGAAGATCAAGAGGTGATGAAGGCATGGATAAGAGCGTCGTGGTGGCGTTGCAGGGA
CAAATGACTGCAATGAACAATCTACTCAAATCTATGACAATATCGCAAGTCAACGCCGCAGGAAGCTCTATGCACGCGGCCAACCAGATTGATGATTTGGGATGTGTGGG
ATGCGGCGGTCCTCATCACACTGACGCATGCCCACTCAACACTGAAACTGTCGCGTTCGTAAGGAACGACCCCTTCTCCAGTACTTACAACCCTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTCCAACAGAAGGATAGAGAAAACCTACATGACGTGTGGAGTAGGTTTAAGAGGATGGTGAAAGCATGCCCCCACAATGGCATTCCTGAATGCATAATGATGGA
GGTTTTCTATTTTAGGCTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGTTTGTAGGCGGTATGCTTAAGAGCTCTTACAACCAGATTAAGGCGACACTGGACACAA
TGGCCAGCAACAATGAAGAATGGGATGAAGATGATTTCGGTAATCACCGAGGAGGAAGATCAAGAGGTGATGAAGGCATGGATAAGAGCGTCGTGGTGGCGTTGCAGGGA
CAAATGACTGCAATGAACAATCTACTCAAATCTATGACAATATCGCAAGTCAACGCCGCAGGAAGCTCTATGCACGCGGCCAACCAGATTGATGATTTGGGATGTGTGGG
ATGCGGCGGTCCTCATCACACTGACGCATGCCCACTCAACACTGAAACTGTCGCGTTCGTAAGGAACGACCCCTTCTCCAGTACTTACAACCCTGGTTGA
Protein sequenceShow/hide protein sequence
MSFQQKDRENLHDVWSRFKRMVKACPHNGIPECIMMEVFYFRLNKATQQTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFGNHRGGRSRGDEGMDKSVVVALQG
QMTAMNNLLKSMTISQVNAAGSSMHAANQIDDLGCVGCGGPHHTDACPLNTETVAFVRNDPFSSTYNPG