CuGenDBv2

Gene ID	PI0008733
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Gag-pro-like protein
Genome location	chr11:13605338..13605547
RNA-Seq Expression	PI0008733
Synteny	PI0008733
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]

1.3e-17

85.71

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Query:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS
        MD YVSK SLMIAKT+IKSGFQM KGLGKDNQ D EVISLPKAKE+FGLGYKP+TS
Subjt:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS

KAA0043020.1 uncharacterized protein E6C27_scaffold75G00990 [Cucumis melo var. makuwa]

2.7e-15

80.36

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Query:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS
        MD YVSK SLMIAKT+IKS FQM KGLGKDNQ D +VISLPKAKE+FGLGYKP  S
Subjt:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]

2.2e-17

85.71

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Query:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS
        MD YVSK SLMIAKT+IKSGFQM KGLGKDNQ D EVISLPKAKE FGLGYKP+TS
Subjt:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]

1.3e-17

85.71

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Query:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS
        MD YVSK SLMIAKT+IKSGFQM KGLGKDNQ D EVISLPKAKE+FGLGYKP+TS
Subjt:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS

TYK06500.1 uncharacterized protein E5676_scaffold70G00280 [Cucumis melo var. makuwa]

4.7e-15

78.57

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Query:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS
        MD YVSK SLMI KT+IKS FQM KGLGKDNQ D +VISLPKAKE+FGLGYKP  S
Subjt:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SUT0 Reverse transcriptase

6.4e-18

85.71

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Query:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS
        MD YVSK SLMIAKT+IKSGFQM KGLGKDNQ D EVISLPKAKE+FGLGYKP+TS
Subjt:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS

A0A5A7TI68 Uncharacterized protein

1.3e-15

80.36

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Query:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS
        MD YVSK SLMIAKT+IKS FQM KGLGKDNQ D +VISLPKAKE+FGLGYKP  S
Subjt:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS

A0A5A7V681 Retrotrans_gag domain-containing protein

1.1e-17

85.71

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Query:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS
        MD YVSK SLMIAKT+IKSGFQM KGLGKDNQ D EVISLPKAKE FGLGYKP+TS
Subjt:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS

A0A5A7VAU5 Uncharacterized protein

6.4e-18

85.71

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Query:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS
        MD YVSK SLMIAKT+IKSGFQM KGLGKDNQ D EVISLPKAKE+FGLGYKP+TS
Subjt:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS

A0A5D3C587 Retrotrans_gag domain-containing protein

2.3e-15

78.57

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Query:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS
        MD YVSK SLMI KT+IKS FQM KGLGKDNQ D +VISLPKAKE+FGLGYKP  S
Subjt:  MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGATCATTATGTGTCTAAAAGATCTTTGATGATTGCGAAGACCATTATCAAAAGCGGTTTCCAAATGCAAAAAGGATTGGGAAAGGATAATCAAGAAGATCCAGAGGT
GATTTCTCTTCCTAAAGCCAAAGAAAGGTTTGGGTTAGGCTATAAGCCGATGACTTCTCCGTTGCATGTGTTGACGACCCCATGGCCTTTCTCCATGTGA

mRNA sequence

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Protein sequence

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MDHYVSKRSLMIAKTIIKSGFQMQKGLGKDNQEDPEVISLPKAKERFGLGYKPMTSPLHVLTTPWPFSM

PI0008733 (gene) of Melon (PI 482460) v1 genome