CuGenDBv2

Gene ID	PI0008764
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Ribosomal protein S1
Genome location	chr02:18488918..18489469
RNA-Seq Expression	PI0008764
Synteny	PI0008764
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0005840 - ribosome (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AEN56125.1 ribosomal protein S1 [Cucumis melo subsp. melo]

3.4e-73

84.24

Show/hide

Query:  MFLVDAGP-GTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRF
        MFLVDAGP GTPIICMQDE TGVPINRAAR ET V VGSLDLVAGESLIKE ILERFFIDLVAGESL KERAAARLN DYLVGSTDVVAGEPL +LPRRF
Subjt:  MFLVDAGP-GTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRF

Query:  RQNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVVRVVQKETLP
        RQNRAWMEL KIWQRN+KVKG IIEKVKGGYSVAIAGFITFLPF PLIRQRIS+D F+I+SI+PK      NIVV+   KETLP
Subjt:  RQNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVVRVVQKETLP

QCB20452.1 ribosomal protein S1 [Actinidia chinensis]

1.0e-69

85.06

Show/hide

Query:  MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFR
        MFLVDAGPGTP ICMQDE TGVPINRA RFE    VGSLDLVAGESLIKEQILERFFIDLVAGESL KERAAAR ND  LVGSTDVVAGEPLL+LPRRFR
Subjt:  MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFR

Query:  QNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVV
        QNRAWMEL KIW+ N KVKGFIIEK KGGYSVAIAGFITFLPFRPLI QRIS+D FTIESINPK      NIVV
Subjt:  QNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVV

YP_004849347.1 ribosomal protein S1 [Cucumis sativus]

6.9e-74

90.3

Show/hide

Query:  MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFR
        MFLVDAGPGTPIICMQDE TGVPINRAARFET   VGSLDLVAGESL+KEQILERFFIDLVAGESL KERAAARLN DYLVGSTDVVAGEPL +LPRRFR
Subjt:  MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFR

Query:  QNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPF-RPLIRQRISHDLFTIESINPK
        QNRAWMEL KIWQ N+KVKGFIIEKVKGGYSVAIAGFITFLPF RPLIRQRIS+D FTI+SINPK
Subjt:  QNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPF-RPLIRQRISHDLFTIESINPK

YP_009676235.1 ribosomal protein S1 [Camellia sinensis]

1.8e-69

84.48

Show/hide

Query:  MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFR
        MFLVDAGPGTP ICMQ+E TGVPINRA RFE    VGSLDLVAGESLIKEQILERFFIDLVAGESL KERAAAR ND  LVGSTDVVAGEPLL+LPRRFR
Subjt:  MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFR

Query:  QNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVV
        QNRAWMEL KIW+ N KVKGFIIEKVKGGYSVAIAGFITFLPFRPLI +RIS+D FTIESINPK      NIVV
Subjt:  QNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVV

YP_009706796.1 ribosomal protein S1 [Ilex pubescens]

1.6e-70

85.63

Show/hide

Query:  MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFR
        MFLVDAGPGTP ICMQDE TGVPINRA RFE    VGSLDLVAGESLIKEQILERFFIDLVAGESL KERAAAR ND  LVGSTDVVAGEPLL+LPRRFR
Subjt:  MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFR

Query:  QNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVV
        QNRAWMEL KIW+ N KVKGFIIEKVKGGYSVAIAGFITFLPFRPLI QRIS+D FTIESINPK      NIVV
Subjt:  QNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVV

TrEMBL top hits

e value

%identity

Alignment

A0A3S9JIJ3 Ribosomal protein S1

1.7e-73

84.24

Show/hide

Query:  MFLVDAGP-GTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRF
        MFLVDAGP GTPIICMQDE TGVPINRAAR ET V VGSLDLVAGESLIKE ILERFFIDLVAGESL KERAAARLN DYLVGSTDVVAGEPL +LPRRF
Subjt:  MFLVDAGP-GTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRF

Query:  RQNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVVRVVQKETLP
        RQNRAWMEL KIWQRN+KVKG IIEKVKGGYSVAIAGFITFLPF PLIRQRIS+D F+I+SI+PK      NIVV+   KETLP
Subjt:  RQNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVVRVVQKETLP

A0A5A7V9I0 Ribosomal protein S1 (Mitochondrion)

1.7e-73

84.24

Show/hide

Query:  MFLVDAGP-GTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRF
        MFLVDAGP GTPIICMQDE TGVPINRAAR ET V VGSLDLVAGESLIKE ILERFFIDLVAGESL KERAAARLN DYLVGSTDVVAGEPL +LPRRF
Subjt:  MFLVDAGP-GTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRF

Query:  RQNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVVRVVQKETLP
        RQNRAWMEL KIWQRN+KVKG IIEKVKGGYSVAIAGFITFLPF PLIRQRIS+D F+I+SI+PK      NIVV+   KETLP
Subjt:  RQNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVVRVVQKETLP

A0A5C2I386 Ribosomal protein S1

7.7e-71

85.63

Show/hide

Query:  MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFR
        MFLVDAGPGTP ICMQDE TGVPINRA RFE    VGSLDLVAGESLIKEQILERFFIDLVAGESL KERAAAR ND  LVGSTDVVAGEPLL+LPRRFR
Subjt:  MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFR

Query:  QNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVV
        QNRAWMEL KIW+ N KVKGFIIEKVKGGYSVAIAGFITFLPFRPLI QRIS+D FTIESINPK      NIVV
Subjt:  QNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVV

G3EIZ9 Ribosomal protein S1

3.3e-74

90.3

Show/hide

Query:  MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFR
        MFLVDAGPGTPIICMQDE TGVPINRAARFET   VGSLDLVAGESL+KEQILERFFIDLVAGESL KERAAARLN DYLVGSTDVVAGEPL +LPRRFR
Subjt:  MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFR

Query:  QNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPF-RPLIRQRISHDLFTIESINPK
        QNRAWMEL KIWQ N+KVKGFIIEKVKGGYSVAIAGFITFLPF RPLIRQRIS+D FTI+SINPK
Subjt:  QNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPF-RPLIRQRISHDLFTIESINPK

G3EU09 Ribosomal protein S1

1.7e-73

84.24

Show/hide

Query:  MFLVDAGP-GTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRF
        MFLVDAGP GTPIICMQDE TGVPINRAAR ET V VGSLDLVAGESLIKE ILERFFIDLVAGESL KERAAARLN DYLVGSTDVVAGEPL +LPRRF
Subjt:  MFLVDAGP-GTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRF

Query:  RQNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVVRVVQKETLP
        RQNRAWMEL KIWQRN+KVKG IIEKVKGGYSVAIAGFITFLPF PLIRQRIS+D F+I+SI+PK      NIVV+   KETLP
Subjt:  RQNRAWMELKKIWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVVRVVQKETLP

SwissProt top hits

e value

%identity

Alignment

P26863 Ribosomal protein S1, mitochondrial

7.5e-15

35.16

Show/hide

Query:  LVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDV-VAGEPLLILPR----
        LVD G  TPIIC Q E   VPI + ARF                                                   G  DV V GEP ++LP+    
Subjt:  LVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDV-VAGEPLLILPR----

Query:  RFRQNRAWMELKKIWQRNKK-VKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESI-NPKPKIRNNNIVVRVV
        + ++   W+EL KIW+ ++  VKGFI+  VKGGY+VAIAG+I FLP   L  +++ +  + I SI N KPKI  +NIVV+ +
Subjt:  RFRQNRAWMELKKIWQRNKK-VKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESI-NPKPKIRNNNIVVRVV

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTCTTGGTGGATGCAGGACCTGGGACCCCCATCATTTGTATGCAAGATGAGTCTACAGGAGTGCCAATCAACCGAGCCGCCAGGTTTGAGACCGACGTAGGGGTGGG
ATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCAAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGAGAAAAGAGCGAGCTGCCGCCA
GGTTGAATGATGATTATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCGCTTTTGATTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAAGAAG
ATTTGGCAAAGGAATAAAAAAGTCAAAGGCTTTATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCCGTCCTCTCAT
AAGGCAAAGGATATCTCATGATCTCTTCACCATTGAGAGCATTAACCCCAAACCCAAAATCAGGAATAACAATATTGTGGTTCGAGTGGTTCAAAAAGAAACTTTGCCTT
AA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MFLVDAGPGTPIICMQDESTGVPINRAARFETDVGVGSLDLVAGESLIKEQILERFFIDLVAGESLRKERAAARLNDDYLVGSTDVVAGEPLLILPRRFRQNRAWMELKK
IWQRNKKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQRISHDLFTIESINPKPKIRNNNIVVRVVQKETLP

PI0008764 (gene) of Melon (PI 482460) v1 genome