CuGenDBv2

Gene ID	PI0008787
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	serine/arginine repetitive matrix protein 1
Genome location	chr07:19913586..19914349
RNA-Seq Expression	PI0008787
Synteny	PI0008787
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8649619.1 hypothetical protein Csa_012837 [Cucumis sativus]

2.2e-76

92.36

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAV
        MD DEFYRQPAAVPFKWEIKPGVPRNHHRLR SPTHSPPQH RQKLKPPP VSHFPHP NSL SSPRT+S+RWRFVR EQVSSSGCFPSPLPNRKSPK+V
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAV

Query:  SRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWA
        SRK PEPDYSSDL+TLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWA
Subjt:  SRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWA

XP_004142634.1 uncharacterized protein LOC101220757 [Cucumis sativus]

1.3e-79

92.59

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAV
        MD DEFYRQPAAVPFKWEIKPGVPRNHHRLR SPTHSPPQH RQKLKPPP VSHFPHP NSL SSPRT+S+RWRFVR EQVSSSGCFPSPLPNRKSPK+V
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAV

Query:  SRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
        SRK PEPDYSSDL+TLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  SRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

XP_008444194.1 PREDICTED: uncharacterized protein LOC103487607 [Cucumis melo]

9.7e-80

93.87

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAV
        MD DEFYR+PAAVPFKWEIKPGVPRNHHR RQSPTHSPPQH RQKLKPPP VSHFPHPSNSL SSPRTRSDRWRFVR EQVSSSGCFPSPLPNRKSPKA+
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAV

Query:  SRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSV-SSSPSSFSSYQSSPRPTSDTEWAGFGLF
        SRKFPEPDYSSDL+TLSRWSVSSRKSISPFRYSV SSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  SRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSV-SSSPSSFSSYQSSPRPTSDTEWAGFGLF

XP_022131529.1 uncharacterized protein DKFZp434B061-like [Momordica charantia]

4.4e-56

75.58

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSN----SLRSSPRTRSDRWRFVR-----PEQVS-SSGCFPSP
        MD DEFYR+PAAVPFKWEIKPGVPR HHRL  SP  SPP    QKLKPPP VSHF  PS     SL SS RTRSDRWRF R     P QVS ++GCFPSP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSN----SLRSSPRTRSDRWRFVR-----PEQVS-SSGCFPSP

Query:  LPNRKSPKAVSRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
         PNRKS K+++RK PEP+Y+++LETLSRWSVSSRKSISPFR SVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  LPNRKSPKAVSRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

XP_038899347.1 uncharacterized protein LOC120086669 [Benincasa hispida]

1.6e-69

87.04

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAV
        MDVDEFYRQPAAVPFKWEIKPGVP+NHHRLR SPTHSPPQH  QKLKPPP VS+F HPSNSL SS RTRSDRWRF +PEQV SSGCFPSPLPNRKS K++
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAV

Query:  SRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
        SR  PEPDYSS LE+LSRWSVSSRKSISPFRYSVSSSPSS+SSY SSPRPTSDTEWAGFGLF
Subjt:  SRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KY52 Uncharacterized protein

4.0e-55

89.83

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAV
        MD DEFYRQPAAVPFKWEIKPGVPRNHHRLR SPTHSPPQH RQKLKPPP VSHFPHP NSL SSPRT+S+RWRFVR EQVSSSGCFPSPLPNRKSPK+V
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAV

Query:  SRKFPEPDYSSDLETLSR
        SRK PEPDYSSDL+TLSR
Subjt:  SRKFPEPDYSSDLETLSR

A0A1S3BAM4 uncharacterized protein LOC103487607

4.7e-80

93.87

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAV
        MD DEFYR+PAAVPFKWEIKPGVPRNHHR RQSPTHSPPQH RQKLKPPP VSHFPHPSNSL SSPRTRSDRWRFVR EQVSSSGCFPSPLPNRKSPKA+
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAV

Query:  SRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSV-SSSPSSFSSYQSSPRPTSDTEWAGFGLF
        SRKFPEPDYSSDL+TLSRWSVSSRKSISPFRYSV SSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  SRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSV-SSSPSSFSSYQSSPRPTSDTEWAGFGLF

A0A6J1BQH3 uncharacterized protein DKFZp434B061-like

2.1e-56

75.58

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSN----SLRSSPRTRSDRWRFVR-----PEQVS-SSGCFPSP
        MD DEFYR+PAAVPFKWEIKPGVPR HHRL  SP  SPP    QKLKPPP VSHF  PS     SL SS RTRSDRWRF R     P QVS ++GCFPSP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSN----SLRSSPRTRSDRWRFVR-----PEQVS-SSGCFPSP

Query:  LPNRKSPKAVSRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
         PNRKS K+++RK PEP+Y+++LETLSRWSVSSRKSISPFR SVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
Subjt:  LPNRKSPKAVSRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

A0A6J1FHC7 uncharacterized protein LOC111445775

4.9e-53

73.96

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDV--SHFPHPSNSLRSSPRTRSDRW-----RFVRPEQVSSSGCFPSPLPN
        MDVDEFYRQPAAVPFKWEIKPGVPRNHHRL Q PTHSP QH  +KLKPPP V  + F   SNSL    RTRSDRW     +   PEQV S GCF SPLPN
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDV--SHFPHPSNSLRSSPRTRSDRW-----RFVRPEQVSSSGCFPSPLPN

Query:  RKSPKAVSRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
        RK+ K V+RK PEPDY+S+LETL RWSVSS+KSISPFR SVSS  SS SSYQSSPRPTSD+EWAGFGLF
Subjt:  RKSPKAVSRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

A0A6J1ISY3 uncharacterized protein LOC111480325

1.0e-50

71.35

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDV--SHFPHPSNSLRSSPRTRSDRW-----RFVRPEQVSSSGCFPSPLPN
        MDVDEFYRQPAAVPFKWEIKPGVPRNHH L   PTHSP QH  +KLKPPP V  + F   SNSL    RTRSDRW     +   PEQV S GCF SPLPN
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDV--SHFPHPSNSLRSSPRTRSDRW-----RFVRPEQVSSSGCFPSPLPN

Query:  RKSPKAVSRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSS--SPSSFSSYQSSPRPTSDTEWAGFGLF
        RK+ K ++RK PEPD +S+LETL RWS+SS+KSISPFR SVSS  SPSS SSYQSSPRPTSD+EWAGFGLF
Subjt:  RKSPKAVSRKFPEPDYSSDLETLSRWSVSSRKSISPFRYSVSS--SPSSFSSYQSSPRPTSDTEWAGFGLF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G21695.1 hydroxyproline-rich glycoprotein family protein

5.4e-04

31.79

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQR---QKLK-PPPDVSHFPHPSNSLRSSPRTR-------SDRWRFVRPEQVSSSGCFPS
        +D D+ +++P AVPFKWEI+PGVP+            PP   +    KLK  PP  S  P  S+S  S  R+R          ++   P   S S C  S
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQR---QKLK-PPPDVSHFPHPSNSLRSSPRTR-------SDRWRFVRPEQVSSSGCFPS

Query:  PLP--NRKSPKAVSRK----FPEPDY------SSDLETLSRWSVSSRKSISP--FRYSVSSSPSSFSSYQSSP
        P P     SP+A        FP+  +      S DL+   +   SS  S S   +    + SPS   S Q SP
Subjt:  PLP--NRKSPKAVSRK----FPEPDY------SSDLETLSRWSVSSRKSISP--FRYSVSSSPSSFSSYQSSP

AT1G77400.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789)

4.6e-19

34.48

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPR--------------------------NHHRLRQSPTHSPPQHQ---------------------RQKLKP---PP
        +DVD+ +++P  +PF WEI+PGVP+                          +H +    P  SPP                          KLKP   P 
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPR--------------------------NHHRLRQSPTHSPPQHQ---------------------RQKLKP---PP

Query:  DVSHFPHPSNSLRSSPRTRSDRWRFVRPEQ--------------VSSSGCFPSP-LPNRKSPKAVSRK----FPEPD-YSSDLETLSRWSVSSRKSISPF
         +S F  P  S RSSPR  S+RW+  RP +              V+  GCFPSP    RK     SR+      E D Y SD+ET+S W+VSSR+S+SP 
Subjt:  DVSHFPHPSNSLRSSPRTRSDRWRFVRPEQ--------------VSSSGCFPSP-LPNRKSPKAVSRK----FPEPD-YSSDLETLSRWSVSSRKSISPF

Query:  RYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF
             S  SSFSS + SPR  ++ EW GFGLF
Subjt:  RYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGACGTCGATGAATTTTACCGGCAACCAGCTGCCGTTCCTTTCAAATGGGAGATCAAACCCGGCGTCCCCAGAAACCACCACCGGCTCCGTCAGTCACCAACTCACTC
TCCGCCTCAACACCAACGTCAAAAGCTGAAACCTCCTCCTGATGTTTCCCATTTCCCCCATCCTTCAAATTCTCTTCGCTCATCTCCTCGAACCCGGTCCGACCGGTGGC
GGTTCGTCCGTCCCGAGCAAGTCTCGTCGTCTGGTTGCTTCCCATCGCCTTTGCCGAACCGGAAATCGCCCAAGGCCGTGAGCCGGAAATTCCCCGAACCGGATTACTCC
TCTGACTTGGAGACTTTGTCCCGCTGGTCGGTTTCCAGTCGGAAGTCGATTTCGCCGTTCCGATATTCAGTTTCGTCGTCGCCGTCGTCGTTTTCGTCGTACCAATCGTC
GCCCCGTCCGACCAGTGATACGGAATGGGCCGGGTTTGGGCTATTTTGA

mRNA sequence

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CTTACCCATCTTTCTACCAATGGACGTCGATGAATTTTACCGGCAACCAGCTGCCGTTCCTTTCAAATGGGAGATCAAACCCGGCGTCCCCAGAAACCACCACCGGCTCC
GTCAGTCACCAACTCACTCTCCGCCTCAACACCAACGTCAAAAGCTGAAACCTCCTCCTGATGTTTCCCATTTCCCCCATCCTTCAAATTCTCTTCGCTCATCTCCTCGA
ACCCGGTCCGACCGGTGGCGGTTCGTCCGTCCCGAGCAAGTCTCGTCGTCTGGTTGCTTCCCATCGCCTTTGCCGAACCGGAAATCGCCCAAGGCCGTGAGCCGGAAATT
CCCCGAACCGGATTACTCCTCTGACTTGGAGACTTTGTCCCGCTGGTCGGTTTCCAGTCGGAAGTCGATTTCGCCGTTCCGATATTCAGTTTCGTCGTCGCCGTCGTCGT
TTTCGTCGTACCAATCGTCGCCCCGTCCGACCAGTGATACGGAATGGGCCGGGTTTGGGCTATTTTGATTGGCCTTTAAGAGATGTTGGCCCGAAAGTATAGAGGCCAAG
TTGTAGCCCATCTAGCTGGTGATTCTGAATGGGCTTGGTTTTGGGCTTTTTGTTTAGTGGACTTGAAGAGACTGTGGGCTTCAAGTTGTTGCGTAGAAATAGGAAGCTCA
AATCCCTAATTGTATTGTGATTTTTGCAATCATAGGGATTTTCTTATAAAACCCCATAAATTACTTAATATGTTATAAAAAGAATAAAATCTAAGATTGTGTTT

Protein sequence

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MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQSPTHSPPQHQRQKLKPPPDVSHFPHPSNSLRSSPRTRSDRWRFVRPEQVSSSGCFPSPLPNRKSPKAVSRKFPEPDYS
SDLETLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF

PI0008787 (gene) of Melon (PI 482460) v1 genome