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PI0008803 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008803
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionlate embryogenesis abundant protein 6-like
Genome locationchr06:2032088..2033646
RNA-Seq ExpressionPI0008803
SyntenyPI0008803
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134355.1 late embryogenesis abundant protein 6 [Cucumis sativus]2.2e-4791.87Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGM
        MQAV+EKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFV+PGGT T PDYS  V  APGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGM

Query:  TMVGAPGSVDMAGAPPPVNKKLL
        TMVGAPG+VDMAGAP PVNKKLL
Subjt:  TMVGAPGSVDMAGAPPPVNKKLL

XP_008438228.1 PREDICTED: uncharacterized protein LOC103483397 [Cucumis melo]1.9e-5195.12Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGM
        MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGT TPPDYSANV  APGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGM

Query:  TMVGAPGSVDMAGAPPPVNKKLL
        TMVGAPG+VDMAGAP P NKKLL
Subjt:  TMVGAPGSVDMAGAPPPVNKKLL

XP_022924652.1 late embryogenesis abundant protein 6-like [Cucurbita moschata]2.7e-3476.61Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTATPPDYSANVAAAPG
        MQAV++KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GT T      NVA APG
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTATPPDYSANVAAAPG

Query:  MTMVGAPGSVDMAGAPPPVNKKLL
        +TMVGAPG+VDMAG P  V+KK L
Subjt:  MTMVGAPGSVDMAGAPPPVNKKLL

XP_022980446.1 late embryogenesis abundant protein 6-like [Cucurbita maxima]8.0e-3475.81Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTATPPDYSANVAAAPG
        MQAV++KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GT T      NVA APG
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTATPPDYSANVAAAPG

Query:  MTMVGAPGSVDMAGAPPPVNKKLL
        +TMVGAPG+VDM G P  V+KK L
Subjt:  MTMVGAPGSVDMAGAPPPVNKKLL

XP_038878054.1 late embryogenesis abundant protein 6-like [Benincasa hispida]6.8e-4184.55Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGM
        MQAVK+KLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEM KYA+THT+TFVAPGGTA   D +A++A APG+
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGM

Query:  TMVGAPGSVDMAGAPPPVNKKLL
        T+V APG+V+MAGA PPVNKKLL
Subjt:  TMVGAPGSVDMAGAPPPVNKKLL

TrEMBL top hitse value%identityAlignment
A0A0A0L6I7 Uncharacterized protein1.1e-4791.87Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGM
        MQAV+EKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFV+PGGT T PDYS  V  APGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGM

Query:  TMVGAPGSVDMAGAPPPVNKKLL
        TMVGAPG+VDMAGAP PVNKKLL
Subjt:  TMVGAPGSVDMAGAPPPVNKKLL

A0A1S3AWI7 uncharacterized protein LOC1034833979.2e-5295.12Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGM
        MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGT TPPDYSANV  APGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGM

Query:  TMVGAPGSVDMAGAPPPVNKKLL
        TMVGAPG+VDMAGAP P NKKLL
Subjt:  TMVGAPGSVDMAGAPPPVNKKLL

A0A5A7U624 Late embryogenesis abundant protein9.2e-5295.12Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGM
        MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGT TPPDYSANV  APGM
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGM

Query:  TMVGAPGSVDMAGAPPPVNKKLL
        TMVGAPG+VDMAGAP P NKKLL
Subjt:  TMVGAPGSVDMAGAPPPVNKKLL

A0A6J1ED39 late embryogenesis abundant protein 6-like1.3e-3476.61Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTATPPDYSANVAAAPG
        MQAV++KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GT T      NVA APG
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTATPPDYSANVAAAPG

Query:  MTMVGAPGSVDMAGAPPPVNKKLL
        +TMVGAPG+VDMAG P  V+KK L
Subjt:  MTMVGAPGSVDMAGAPPPVNKKLL

A0A6J1IRE5 late embryogenesis abundant protein 6-like3.9e-3475.81Show/hide
Query:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTATPPDYSANVAAAPG
        MQAV++KLHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GT T      NVA APG
Subjt:  MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPG-GTATPPDYSANVAAAPG

Query:  MTMVGAPGSVDMAGAPPPVNKKLL
        +TMVGAPG+VDM G P  V+KK L
Subjt:  MTMVGAPGSVDMAGAPPPVNKKLL

SwissProt top hitse value%identityAlignment
Q39138 Late embryogenesis abundant protein 67.3e-0646.84Show/hide
Query:  MQAVKEKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH
        MQ+ K+K+ DM+   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK +  H
Subjt:  MQAVKEKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH

Arabidopsis top hitse value%identityAlignment
AT1G32560.1 Late embryogenesis abundant protein, group 1 protein5.2e-0746.84Show/hide
Query:  MQAVKEKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH
        MQ+ K+K+ DM+   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK +  H
Subjt:  MQAVKEKLHDMSVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCAGTTAAGGAGAAGCTACACGATATGAGCGTCATGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGA
AGTGGCTCATGAGGTAAGGTTGGCAAGAGAGGCTGAAGCTGCAATGGATCTTCATGTAGCCAAAGCTGGAATGAAAGCTGAGAAAGAAATGGCTAAGTATGCTGATACTC
ACACCAATACCTTTGTGGCTCCGGGCGGAACCGCCACACCTCCTGATTACTCCGCCAACGTAGCAGCCGCTCCCGGCATGACTATGGTTGGAGCCCCCGGCAGCGTAGAC
ATGGCCGGAGCTCCTCCTCCCGTTAATAAGAAGTTACTGTAA
mRNA sequenceShow/hide mRNA sequence
AATATACCAACCAAGAGAGTTGAATTCAAATAAACTATAAATTTGGTTATAAACTTTGGATTTAACCATTAACATCCTCTCTAAAGATTTATATAGGCTGAATTCAAAGA
GACAACCTTCAATTTCTACAAGGCCCCAGAAACAAAAAGATGCAAGCAGTTAAGGAGAAGCTACACGATATGAGCGTCATGCGCAAGGCCAAGGCCGAGGCAAAGGCCGA
AGAGAAGGCAGAGAAGGAGCTAGCAAAAGCAAGAGTGGAAGTGGCTCATGAGGTAAGGTTGGCAAGAGAGGCTGAAGCTGCAATGGATCTTCATGTAGCCAAAGCTGGAA
TGAAAGCTGAGAAAGAAATGGCTAAGTATGCTGATACTCACACCAATACCTTTGTGGCTCCGGGCGGAACCGCCACACCTCCTGATTACTCCGCCAACGTAGCAGCCGCT
CCCGGCATGACTATGGTTGGAGCCCCCGGCAGCGTAGACATGGCCGGAGCTCCTCCTCCCGTTAATAAGAAGTTACTGTAAAAAAAAGTTCTTGTGTAACGCCATGCATA
AAAAGTTTCATCTTTTATTTGCAAATAATGTACTTTGGTTTGTTTTTTTTCTACAAGATTTATACCATTCTACCACATCTTTAGATGCTGTGTAGTATATATTATTATTT
ATACACACAATAGAATTTAAGATTCTATATTTTGGTTTCATTTTCCACATTATAATCCTCGGTAGATAACAAAACAAAGAAAAAATTATATGAAAATAATATCTATAAAC
TTAAGTTTTA
Protein sequenceShow/hide protein sequence
MQAVKEKLHDMSVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADTHTNTFVAPGGTATPPDYSANVAAAPGMTMVGAPGSVD
MAGAPPPVNKKLL