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PI0008808 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008808
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr11:18974445..18974663
RNA-Seq ExpressionPI0008808
SyntenyPI0008808
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041176.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.9e-1976.39Show/hide
Query:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT
        M EEETIA++NV V DI+NE   LGEK+SD KLVRKVLRSLP +FNMKVTAIEEAND+S MKLDEL GSL T
Subjt:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT

KAA0043137.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]5.0e-2075Show/hide
Query:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT
        M E+ETIA++NV+V DI+NES + GEK+SD KLVRKVLRSLP +FNMKVTAIEEAND+S MKLDEL GSL T
Subjt:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT

MCI34724.1 gag-pol polyprotein [Trifolium medium]2.3e-2073.61Show/hide
Query:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT
        M E+ETI+K+N ++RDI+N  F+LGEK+S+EKLVRK LRSLPKRFNMKVTAIEEA D+ST+K+DELIGSL T
Subjt:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT

PNX73473.1 gag-protease polyprotein, partial [Trifolium pratense]5.0e-2073.61Show/hide
Query:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT
        M E+ETI ++N ++RDI+N SFSL EK+S+EKLVRK+LRSLPKRF+MKVTAIEEA D+STMK+DELIGSL T
Subjt:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT

PNY16301.1 gag-protease polyprotein [Trifolium pratense]1.5e-1970.83Show/hide
Query:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT
        M E+ETI+++N ++RDI+N SF+LG K+S+EKL RK+LRSLPKRFNMKVT IEEA D+STMK+DELIGSL T
Subjt:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT

TrEMBL top hitse value%identityAlignment
A0A2K3L4M7 Gag-protease polyprotein (Fragment)2.4e-2073.61Show/hide
Query:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT
        M E+ETI ++N ++RDI+N SFSL EK+S+EKLVRK+LRSLPKRF+MKVTAIEEA D+STMK+DELIGSL T
Subjt:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT

A0A2K3PLY8 Gag-protease polyprotein7.1e-2070.83Show/hide
Query:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT
        M E+ETI+++N ++RDI+N SF+LG K+S+EKL RK+LRSLPKRFNMKVT IEEA D+STMK+DELIGSL T
Subjt:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT

A0A392RFB6 Gag-pol polyprotein1.1e-2073.61Show/hide
Query:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT
        M E+ETI+K+N ++RDI+N  F+LGEK+S+EKLVRK LRSLPKRFNMKVTAIEEA D+ST+K+DELIGSL T
Subjt:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT

A0A5A7TGK3 Gag-pol polyprotein9.2e-2076.39Show/hide
Query:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT
        M EEETIA++NV V DI+NE   LGEK+SD KLVRKVLRSLP +FNMKVTAIEEAND+S MKLDEL GSL T
Subjt:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT

A0A5A7TMW2 Gag-proteinase polyprotein2.4e-2075Show/hide
Query:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT
        M E+ETIA++NV+V DI+NES + GEK+SD KLVRKVLRSLP +FNMKVTAIEEAND+S MKLDEL GSL T
Subjt:  MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGAAGAAGAAACCATTGCTAAGTATAATGTCAAAGTTCGTGATATTTCAAATGAATCCTTCTCTTTGGGCGAAAAATTATCTGATGAGAAATTGGTTCGCAAAGT
TCTTCGGTCTCTTCCTAAAAGATTCAACATGAAGGTTACTGCTATCGAAGAGGCTAATGATATCTCCACAATGAAACTAGATGAGTTAATCGGATCTCTGCATACATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGAAGAAGAAACCATTGCTAAGTATAATGTCAAAGTTCGTGATATTTCAAATGAATCCTTCTCTTTGGGCGAAAAATTATCTGATGAGAAATTGGTTCGCAAAGT
TCTTCGGTCTCTTCCTAAAAGATTCAACATGAAGGTTACTGCTATCGAAGAGGCTAATGATATCTCCACAATGAAACTAGATGAGTTAATCGGATCTCTGCATACATGA
Protein sequenceShow/hide protein sequence
MLEEETIAKYNVKVRDISNESFSLGEKLSDEKLVRKVLRSLPKRFNMKVTAIEEANDISTMKLDELIGSLHT