; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008835 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008835
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionF-box protein
Genome locationchr09:20599493..20599929
RNA-Seq ExpressionPI0008835
SyntenyPI0008835
Gene Ontology termsNA
InterPro domainsIPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039382.1 F-box protein [Cucumis melo var. makuwa]4.7e-4870.55Show/hide
Query:  SSVASFGFEGDWS-ITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN
        S VASFGFEGDWS IT++  C                 ILNPMTNEFMEIPQPEIELDVH  GFGFS + KQYKLFRT PEV +N KKCHYIMEIFTFDN
Subjt:  SSVASFGFEGDWS-ITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN

Query:  P-KQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKENEVVIYALDV
          KQW HFERLPF+V+  G YLNGVIYWIG KLEKE E VIYALDV
Subjt:  P-KQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKENEVVIYALDV

KAA0039383.1 F-box protein [Cucumis melo var. makuwa]8.5e-5078.91Show/hide
Query:  SSVASFGFEGDWSITVMVCCILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN-PKQWSHFERLPFMVYDP
        SSVASFGFEG          ILNPMTNEFMEIPQPEIELDVHC GFGFS + KQYKLFRT PEV DNWKKCHYIMEIFTFDN  KQW HF+RLPF+V+  
Subjt:  SSVASFGFEGDWSITVMVCCILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN-PKQWSHFERLPFMVYDP

Query:  GSYLNGVIYWIGNKLEKENEVVIYALDV
        G YLNGVIYWIG KLEKE EVVIYALDV
Subjt:  GSYLNGVIYWIGNKLEKENEVVIYALDV

KGN52568.1 hypothetical protein Csa_008927 [Cucumis sativus]1.5e-4164.71Show/hide
Query:  SSVASFGFEGDW-SITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN
        SSVASF FE DW SIT++  C                 ILNPMTNEF+EIP P+IELDVHC GFGFS + KQYKLFRT PE+  NWKKCHY M+IFTFDN
Subjt:  SSVASFGFEGDW-SITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN

Query:  -PKQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKE
          KQW HF+RLPF+V+  G YLNG+IYWIG KLEKE
Subjt:  -PKQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKE

XP_008459707.1 PREDICTED: F-box protein At3g07870-like [Cucumis melo]4.7e-4870.55Show/hide
Query:  SSVASFGFEGDWS-ITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN
        S VASFGFEGDWS IT++  C                 ILNPMTNEFMEIPQPEIELDVH  GFGFS + KQYKLFRT PEV +N KKCHYIMEIFTFDN
Subjt:  SSVASFGFEGDWS-ITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN

Query:  P-KQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKENEVVIYALDV
          KQW HFERLPF+V+  G YLNGVIYWIG KLEKE E VIYALDV
Subjt:  P-KQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKENEVVIYALDV

XP_038890298.1 F-box protein At3g07870-like [Benincasa hispida]1.9e-2037.91Show/hide
Query:  ASFGFEGDWS-ITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWK-KCHYIMEIFTFD---
        +S  F+G+W+ + +M  C                 I NPMTNEF+++P+ +++ D++  GFGF++  KQYKLFR       N + +   IM++ TF    
Subjt:  ASFGFEGDWS-ITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWK-KCHYIMEIFTFD---

Query:  ---NPKQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKENEVVIYALDVVLNK
           N  QW +   LP  ++  G+YLNG IYWIG + EKENE  IY LDV   K
Subjt:  ---NPKQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKENEVVIYALDVVLNK

TrEMBL top hitse value%identityAlignment
A0A0A0KSN0 Uncharacterized protein7.1e-4264.71Show/hide
Query:  SSVASFGFEGDW-SITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN
        SSVASF FE DW SIT++  C                 ILNPMTNEF+EIP P+IELDVHC GFGFS + KQYKLFRT PE+  NWKKCHY M+IFTFDN
Subjt:  SSVASFGFEGDW-SITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN

Query:  -PKQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKE
          KQW HF+RLPF+V+  G YLNG+IYWIG KLEKE
Subjt:  -PKQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKE

A0A1S3CB99 F-box protein At3g07870-like2.3e-4870.55Show/hide
Query:  SSVASFGFEGDWS-ITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN
        S VASFGFEGDWS IT++  C                 ILNPMTNEFMEIPQPEIELDVH  GFGFS + KQYKLFRT PEV +N KKCHYIMEIFTFDN
Subjt:  SSVASFGFEGDWS-ITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN

Query:  P-KQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKENEVVIYALDV
          KQW HFERLPF+V+  G YLNGVIYWIG KLEKE E VIYALDV
Subjt:  P-KQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKENEVVIYALDV

A0A5A7T7C6 F-box protein2.3e-4870.55Show/hide
Query:  SSVASFGFEGDWS-ITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN
        S VASFGFEGDWS IT++  C                 ILNPMTNEFMEIPQPEIELDVH  GFGFS + KQYKLFRT PEV +N KKCHYIMEIFTFDN
Subjt:  SSVASFGFEGDWS-ITVMVCC-----------------ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN

Query:  P-KQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKENEVVIYALDV
          KQW HFERLPF+V+  G YLNGVIYWIG KLEKE E VIYALDV
Subjt:  P-KQWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKENEVVIYALDV

A0A5A7T8U6 F-box protein4.1e-5078.91Show/hide
Query:  SSVASFGFEGDWSITVMVCCILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN-PKQWSHFERLPFMVYDP
        SSVASFGFEG          ILNPMTNEFMEIPQPEIELDVHC GFGFS + KQYKLFRT PEV DNWKKCHYIMEIFTFDN  KQW HF+RLPF+V+  
Subjt:  SSVASFGFEGDWSITVMVCCILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDN-PKQWSHFERLPFMVYDP

Query:  GSYLNGVIYWIGNKLEKENEVVIYALDV
        G YLNGVIYWIG KLEKE EVVIYALDV
Subjt:  GSYLNGVIYWIGNKLEKENEVVIYALDV

A0A5A7TCF3 F-box protein1.4e-1839.73Show/hide
Query:  SFGFEGDWSITVMV------------CC-----ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDNPK---
        S  F+GDWS   M+            C      I NPMTNEF+++P+ E++ D + +G GFS   KQYK+FR  P    +      IM I TF   +   
Subjt:  SFGFEGDWSITVMV------------CC-----ILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDNPK---

Query:  ---QWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKENEVVIYALDV
           QW     LP ++   G YLNG IYW+G K  KENE  IYAL+V
Subjt:  ---QWSHFERLPFMVYDPGSYLNGVIYWIGNKLEKENEVVIYALDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTGTTGCCTCATTTGGGTTTGAGGGTGATTGGTCAATTACTGTAATGGTTTGTTGCATATTAAATCCGATGACAAATGAGTTCATGGAAATTCCTCAACCTGA
AATAGAATTAGATGTCCACTGCCATGGTTTTGGTTTCAGCTCTCAAAAGAAGCAATACAAATTGTTCAGAACTGCCCCTGAAGTCCCTGACAATTGGAAAAAGTGTCATT
ACATAATGGAGATTTTTACCTTCGATAACCCTAAGCAATGGAGCCATTTTGAGCGTCTACCTTTTATGGTCTATGATCCTGGTAGTTACTTGAATGGAGTCATCTACTGG
ATCGGAAACAAATTAGAAAAAGAAAATGAGGTTGTGATATATGCCCTCGATGTCGTACTGAACAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCTGTTGCCTCATTTGGGTTTGAGGGTGATTGGTCAATTACTGTAATGGTTTGTTGCATATTAAATCCGATGACAAATGAGTTCATGGAAATTCCTCAACCTGA
AATAGAATTAGATGTCCACTGCCATGGTTTTGGTTTCAGCTCTCAAAAGAAGCAATACAAATTGTTCAGAACTGCCCCTGAAGTCCCTGACAATTGGAAAAAGTGTCATT
ACATAATGGAGATTTTTACCTTCGATAACCCTAAGCAATGGAGCCATTTTGAGCGTCTACCTTTTATGGTCTATGATCCTGGTAGTTACTTGAATGGAGTCATCTACTGG
ATCGGAAACAAATTAGAAAAAGAAAATGAGGTTGTGATATATGCCCTCGATGTCGTACTGAACAAATAG
Protein sequenceShow/hide protein sequence
MSSVASFGFEGDWSITVMVCCILNPMTNEFMEIPQPEIELDVHCHGFGFSSQKKQYKLFRTAPEVPDNWKKCHYIMEIFTFDNPKQWSHFERLPFMVYDPGSYLNGVIYW
IGNKLEKENEVVIYALDVVLNK