; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008842 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008842
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionExonuclease DPD1
Genome locationchr02:531890..534244
RNA-Seq ExpressionPI0008842
SyntenyPI0008842
Gene Ontology termsGO:0000738 - DNA catabolic process, exonucleolytic (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008296 - 3'-5'-exodeoxyribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR040393 - Three-prime repair exonuclease 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALG62680.1 exonuclease DPD1 [Cucumis sativus]1.0e-15285.32Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MC SI RFPK+GVP+LANLWRENFHPLNRN GH+ WYDQL FRIYNLEGG+NKRWTRKS+T+KAG +AKTNPSSKPTNIRNEIL+ESV AS TV+I KSE
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL
        KS TQKLQYCDIQPTIIK+KE AH VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINP C+ITNS +H I+N MV+ P+VP MQELIPIIL
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL

Query:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL
        QFV+SRQKPGGYVLLVAHNARTFDVPFLL+EFSRYSVDIP NWLF DTM LARQLMKLSDSKITKITL AL EYY IK  G+ HRAL+DV  LSSILQRL
Subjt:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKLDISDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

XP_004135590.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucumis sativus]4.6e-15385.32Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MC SI RFPK+GVP+LANLWRENFHPLNRN GH+ WYDQL FRIYNLEGG+NKRWTRKS+T+KAG +AKTNPSSKPTNIRNEIL+ES+ AS TV+I KSE
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL
        KS TQKLQYCDIQPTIIK+KE AH VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINP C+ITNS +H I+N MV+ P+VPRMQELIPIIL
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL

Query:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL
        QFV+SRQKPGGYVLLVAHNARTFDVPFLL+EFSRYSVDIP NWLF DTM LARQLMKLSDSKITKITL AL EYY IK  G+ HRAL+DV  LSSILQRL
Subjt:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKLDISDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

XP_008450585.1 PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Cucumis melo]7.1e-15485.63Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MCFSI RFPKFGVPILANLWRENFHPLNRN GHS WYDQL FRIYNLEGGQNKRWTRKS+T+KAG +AKTNPSSKPTNI NEIL+ES+SAS TV++ KSE
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL
        KSGTQKLQYCDIQPTIIK+KE  HPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+P C+ITNS +H ITN+MV    VPRMQELIPIIL
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL

Query:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL
        QFV+SRQKPGGYVLLVAHNARTFDVPFLL+EFSRYS+DIP +WLFLDTM LARQLMKLSDSKITKI+L AL EYY I+  GE HRAL DV+SLS ILQRL
Subjt:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKLD+SDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

XP_022968752.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita maxima]4.7e-14280.43Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MCFSILR PKFGVP LANLWRENFHPLNRN GHS WYDQL FRIYNLEGGQ+KRWTRKS+T+KAGR+AKTNPSSKP+NIRNEILEESVS S TV I KSE
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL
        K GTQKLQ C+IQ TIIK+KELA PVTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+C+I N+ VH IT+ MV RP VPRM+ELIPI+L
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL

Query:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL
        QFV+SRQKP GYVLLVAHNAR FDVPFLL EFSR SVDIP NWLF D ++LARQLMK +DSKITKI+L ALREYY I  VG  HRA++DV +LS ILQRL
Subjt:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKL I DL+ER+FT  DLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

XP_038878496.1 exonuclease DPD1, chloroplastic/mitochondrial isoform X1 [Benincasa hispida]5.1e-14482.01Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MCFSILRFPKFGVP LANLWRENFHPLNRN  HS W+DQL FRIYNLEGGQNKRW RKS+T+KAGR+AK NPSSKPTNIRNEILEES+S S TV I KSE
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL
        KS TQKLQYCDIQ  IIKNKELA PVTVITFDIETTGFSRNLDRIVEIA QDLSGGENSTFQTLINP+C+I NS VH ITNHMV RP VPRM+ELIPI+L
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL

Query:  QFVESR--QKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQ
        QFVESR  QKP GYVLLVAHNARTFDVPFLL EFSR S DIPPNW F D++ LARQLMK SDSKITKI+L ALREYY I+ VG  HRA++DV SLS ILQ
Subjt:  QFVESR--QKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQ

Query:  RLTFDLKLDISDLVERAFTPLDLINKKK
        RLTF+LKL ISDL+ER+FT  DLINKKK
Subjt:  RLTFDLKLDISDLVERAFTPLDLINKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LVY3 Exonuclease domain-containing protein2.2e-15385.32Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MC SI RFPK+GVP+LANLWRENFHPLNRN GH+ WYDQL FRIYNLEGG+NKRWTRKS+T+KAG +AKTNPSSKPTNIRNEIL+ES+ AS TV+I KSE
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL
        KS TQKLQYCDIQPTIIK+KE AH VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINP C+ITNS +H I+N MV+ P+VPRMQELIPIIL
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL

Query:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL
        QFV+SRQKPGGYVLLVAHNARTFDVPFLL+EFSRYSVDIP NWLF DTM LARQLMKLSDSKITKITL AL EYY IK  G+ HRAL+DV  LSSILQRL
Subjt:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKLDISDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

A0A0N9LRH7 Exonuclease DPD14.9e-15385.32Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MC SI RFPK+GVP+LANLWRENFHPLNRN GH+ WYDQL FRIYNLEGG+NKRWTRKS+T+KAG +AKTNPSSKPTNIRNEIL+ESV AS TV+I KSE
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL
        KS TQKLQYCDIQPTIIK+KE AH VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINP C+ITNS +H I+N MV+ P+VP MQELIPIIL
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL

Query:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL
        QFV+SRQKPGGYVLLVAHNARTFDVPFLL+EFSRYSVDIP NWLF DTM LARQLMKLSDSKITKITL AL EYY IK  G+ HRAL+DV  LSSILQRL
Subjt:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKLDISDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

A0A1S4DY73 exonuclease DPD1, chloroplastic/mitochondrial3.4e-15485.63Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MCFSI RFPKFGVPILANLWRENFHPLNRN GHS WYDQL FRIYNLEGGQNKRWTRKS+T+KAG +AKTNPSSKPTNI NEIL+ES+SAS TV++ KSE
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL
        KSGTQKLQYCDIQPTIIK+KE  HPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+P C+ITNS +H ITN+MV    VPRMQELIPIIL
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL

Query:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL
        QFV+SRQKPGGYVLLVAHNARTFDVPFLL+EFSRYS+DIP +WLFLDTM LARQLMKLSDSKITKI+L AL EYY I+  GE HRAL DV+SLS ILQRL
Subjt:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKLD+SDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

A0A6J1HDU6 exonuclease DPD1, chloroplastic/mitochondrial5.7e-14179.14Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MCFSILR PKFGVP LANLWRENFHPLNRN GHS WYDQL FR YNLEGGQ+KRWTRKS+++KAGR+AKT+PSSKP+NIRNEILEESVS S TV I KSE
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL
        K+GTQKLQ C+IQ TI+K+KELA PVTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+C+I N+ VH IT+ MV RP VPRM+ELIPI+L
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL

Query:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL
        QF++SRQKP GYVLLVAHNARTFDVPFLL EFSR SVDIP NWLF D ++LARQLMK +DSKITKI+L ALREYY I  VG  HRA++DV +LS ILQRL
Subjt:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKK
        TFDLKL I DL+ER+FT  DLINKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKK

A0A6J1HUD7 exonuclease DPD1, chloroplastic/mitochondrial2.3e-14280.43Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MCFSILR PKFGVP LANLWRENFHPLNRN GHS WYDQL FRIYNLEGGQ+KRWTRKS+T+KAGR+AKTNPSSKP+NIRNEILEESVS S TV I KSE
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL
        K GTQKLQ C+IQ TIIK+KELA PVTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+C+I N+ VH IT+ MV RP VPRM+ELIPI+L
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIIL

Query:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL
        QFV+SRQKP GYVLLVAHNAR FDVPFLL EFSR SVDIP NWLF D ++LARQLMK +DSKITKI+L ALREYY I  VG  HRA++DV +LS ILQRL
Subjt:  QFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL

Query:  TFDLKLDISDLVERAFTPLDLINKKKK
        TFDLKL I DL+ER+FT  DLINKKKK
Subjt:  TFDLKLDISDLVERAFTPLDLINKKKK

SwissProt top hitse value%identityAlignment
Q38W73 DNA polymerase III PolC-type1.8e-0630.51Show/hide
Query:  ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPD----CFITNSFVHRITNHMVERPTVPRMQELIPIILQFVESRQKPGGYVLLVAHNARTF
        + FD+ETTG S   D I+E+A   +  GE  ++F   I+P+     F T   +  ITN MV      +  E++ +  +F        G  +L  HN  +F
Subjt:  ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPD----CFITNSFVHRITNHMVERPTVPRMQELIPIILQFVESRQKPGGYVLLVAHNARTF

Query:  DVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL
        D+ FL   + R  +D+  N + +DT+ L+R L      +     L +L + YKI  +   HRA AD  S   +L +L
Subjt:  DVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL

Q682U6 Exonuclease DPD1, chloroplastic/mitochondrial2.3e-5942.11Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MC SI +  +  +    +   E  H   +N       D    R  +++G    RW R++V+        T      +N ++ +L  +V  +  +D    E
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCF-ITNSFVHRITNHMVERPTVPRMQELIPII
        +S T+   + ++Q  + ++K+L+  +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    ITN+ +H I N MV RP VPRM+ELIPI 
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCF-ITNSFVHRITNHMVERPTVPRMQELIPII

Query:  LQFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKI-TKITLGALREYYKIKPVGEDHRALADVMSLSSILQ
        L++VESRQKPGGYV+LVAHN ++FD  FL+NEF+R S +IP NWL LD++ LAR+ MK  +  +    +L AL +YY +   G+ HRAL+DV+ LS + Q
Subjt:  LQFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKI-TKITLGALREYYKIKPVGEDHRALADVMSLSSILQ

Query:  RLTFDLKLDISDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDISDLVERAFTPLDL

Q895K2 DNA polymerase III PolC-type1.2e-1028.28Show/hide
Query:  ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIILQFVESRQKPGGYVLLVAHNARTFDVPF
        + FDIETTGFS   D+I+EI    +  G+    + T +NP+  I    +     H       P+++E++P  + F+E         +LVAHNA  FDV F
Subjt:  ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIILQFVESRQKPGGYVLLVAHNARTFDVPF

Query:  LLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRLTFDLK----LDISDLVERAFTPLDL
        +      + +    N   LDT+ L + L      ++ +  L  + ++  I P+   HRA+ D  +   IL +   DLK    ++++ L E  F   D+
Subjt:  LLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRLTFDLK----LDISDLVERAFTPLDL

Q8RA32 DNA polymerase III PolC-type1.0e-0928.8Show/hide
Query:  PTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPDCFITNSFVHRIT---NHMVERPTVPRMQELIPIILQFVESRQKP
        P +    E +     + FDIETTG S   D I+EI    +   +   TF+T +NP   I +SF+ ++T     MV+    P ++E++P  L+F +     
Subjt:  PTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPDCFITNSFVHRIT---NHMVERPTVPRMQELIPIILQFVESRQKP

Query:  GGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL
            +LVAHNA  FDV F+ ++  +  + +      LDT+ L+R L +     +    L  L E++++K +   HRA+ D  + + I  ++
Subjt:  GGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRL

Q8XJR3 DNA polymerase III PolC-type5.0e-0930.54Show/hide
Query:  PTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPDCFITNSFVH--RITNHMVERPTVPRMQELIPIILQFVESRQKPG
        P +I   E +     + FDIETTGFS   D+I+EI    L  GE   +F T ++P   I         IT +MV     P + E++P  ++FV       
Subjt:  PTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPDCFITNSFVH--RITNHMVERPTVPRMQELIPIILQFVESRQKPG

Query:  GYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRLTFDLK--LDI
        G  +LVAHNA  FDV F+          +      +DT+ LAR L       + K+ L  + ++  I  +   HRA+ D  + + IL+     +K  +DI
Subjt:  GYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRLTFDLK--LDI

Query:  SDL
         D+
Subjt:  SDL

Arabidopsis top hitse value%identityAlignment
AT5G26940.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-6042.11Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MC SI +  +  +    +   E  H   +N       D    R  +++G    RW R++V+        T      +N ++ +L  +V  +  +D    E
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCF-ITNSFVHRITNHMVERPTVPRMQELIPII
        +S T+   + ++Q  + ++K+L+  +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    ITN+ +H I N MV RP VPRM+ELIPI 
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCF-ITNSFVHRITNHMVERPTVPRMQELIPII

Query:  LQFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKI-TKITLGALREYYKIKPVGEDHRALADVMSLSSILQ
        L++VESRQKPGGYV+LVAHN ++FD  FL+NEF+R S +IP NWL LD++ LAR+ MK  +  +    +L AL +YY +   G+ HRAL+DV+ LS + Q
Subjt:  LQFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKI-TKITLGALREYYKIKPVGEDHRALADVMSLSSILQ

Query:  RLTFDLKLDISDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDISDLVERAFTPLDL

AT5G26940.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-6042.11Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MC SI +  +  +    +   E  H   +N       D    R  +++G    RW R++V+        T      +N ++ +L  +V  +  +D    E
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCF-ITNSFVHRITNHMVERPTVPRMQELIPII
        +S T+   + ++Q  + ++K+L+  +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    ITN+ +H I N MV RP VPRM+ELIPI 
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCF-ITNSFVHRITNHMVERPTVPRMQELIPII

Query:  LQFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKI-TKITLGALREYYKIKPVGEDHRALADVMSLSSILQ
        L++VESRQKPGGYV+LVAHN ++FD  FL+NEF+R S +IP NWL LD++ LAR+ MK  +  +    +L AL +YY +   G+ HRAL+DV+ LS + Q
Subjt:  LQFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKI-TKITLGALREYYKIKPVGEDHRALADVMSLSSILQ

Query:  RLTFDLKLDISDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDISDLVERAFTPLDL

AT5G26940.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-6042.11Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MC SI +  +  +    +   E  H   +N       D    R  +++G    RW R++V+        T      +N ++ +L  +V  +  +D    E
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCF-ITNSFVHRITNHMVERPTVPRMQELIPII
        +S T+   + ++Q  + ++K+L+  +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    ITN+ +H I N MV RP VPRM+ELIPI 
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCF-ITNSFVHRITNHMVERPTVPRMQELIPII

Query:  LQFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKI-TKITLGALREYYKIKPVGEDHRALADVMSLSSILQ
        L++VESRQKPGGYV+LVAHN ++FD  FL+NEF+R S +IP NWL LD++ LAR+ MK  +  +    +L AL +YY +   G+ HRAL+DV+ LS + Q
Subjt:  LQFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKI-TKITLGALREYYKIKPVGEDHRALADVMSLSSILQ

Query:  RLTFDLKLDISDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDISDLVERAFTPLDL

AT5G26940.4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-6042.11Show/hide
Query:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE
        MC SI +  +  +    +   E  H   +N       D    R  +++G    RW R++V+        T      +N ++ +L  +V  +  +D    E
Subjt:  MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSE

Query:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCF-ITNSFVHRITNHMVERPTVPRMQELIPII
        +S T+   + ++Q  + ++K+L+  +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    ITN+ +H I N MV RP VPRM+ELIPI 
Subjt:  KSGTQKLQYCDIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCF-ITNSFVHRITNHMVERPTVPRMQELIPII

Query:  LQFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKI-TKITLGALREYYKIKPVGEDHRALADVMSLSSILQ
        L++VESRQKPGGYV+LVAHN ++FD  FL+NEF+R S +IP NWL LD++ LAR+ MK  +  +    +L AL +YY +   G+ HRAL+DV+ LS + Q
Subjt:  LQFVESRQKPGGYVLLVAHNARTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKI-TKITLGALREYYKIKPVGEDHRALADVMSLSSILQ

Query:  RLTFDLKLDISDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDISDLVERAFTPLDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTTTTCAATCTTGCGATTTCCGAAATTTGGAGTCCCTATTTTAGCTAACCTTTGGAGGGAAAACTTTCATCCCTTGAACAGAAATCAAGGGCATAGTTATTGGTA
TGATCAACTTTATTTTAGGATCTATAACCTTGAAGGAGGGCAGAACAAGAGATGGACCAGAAAATCTGTGACTAGCAAAGCAGGGAGGGAAGCAAAAACCAACCCTAGCA
GTAAACCGACCAATATCAGGAATGAAATCCTTGAGGAATCGGTGTCAGCAAGCTCTACAGTTGACATTTGTAAGTCTGAGAAAAGTGGAACGCAGAAGCTTCAATATTGT
GATATTCAACCAACAATTATTAAGAACAAGGAATTGGCTCACCCGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGA
AATTGCATTTCAAGATCTTTCAGGAGGAGAAAACAGCACCTTTCAAACATTAATAAATCCGGATTGCTTTATTACAAATTCATTCGTACATCGCATTACAAACCATATGG
TCGAAAGGCCCACTGTTCCAAGGATGCAGGAACTTATTCCAATTATATTACAATTTGTCGAAAGCCGTCAGAAACCTGGTGGTTATGTATTATTGGTAGCTCATAATGCT
CGTACCTTCGACGTACCCTTTTTACTCAATGAATTCAGCCGTTACTCTGTTGATATTCCTCCAAATTGGCTATTTCTCGATACTATGATGTTAGCTCGTCAACTGATGAA
GTTATCCGATTCGAAGATTACAAAAATAACGTTAGGAGCTCTTCGTGAGTATTACAAAATAAAACCGGTGGGTGAAGATCATCGAGCATTGGCGGATGTGATGTCGTTGT
CATCGATTCTTCAAAGGCTTACTTTCGACCTTAAGCTAGATATCTCAGATCTCGTTGAAAGAGCTTTCACTCCTTTAGATCTGATAAATAAGAAGAAAAAATAG
mRNA sequenceShow/hide mRNA sequence
AGAAGCTGTTTTTTCTTCCGACCTCCATGTCTCCCAAAAGCACCTCTCCATCTTCTTCCACGCCATTTACTCCACTTCTTTTTCTCCTTTAGCTTACGTTATTCCTTTGG
TTTTCAATGCACCATAATCCTCCCTCAGATTTCCATTCAGCAGTGCTTCGTTTGGACGTTTTTAAGTGCGACCGATCAATTGGTTGAAGACAATTGATTCTGATGCTGGA
TTTTGTTGGGTTTTCTGTCTAGATTTCCTCTTGTTGTGTTGTGAATTCAAATTATAGCAGCTCCAATGTGCTTTTCAATCTTGCGATTTCCGAAATTTGGAGTCCCTATT
TTAGCTAACCTTTGGAGGGAAAACTTTCATCCCTTGAACAGAAATCAAGGGCATAGTTATTGGTATGATCAACTTTATTTTAGGATCTATAACCTTGAAGGAGGGCAGAA
CAAGAGATGGACCAGAAAATCTGTGACTAGCAAAGCAGGGAGGGAAGCAAAAACCAACCCTAGCAGTAAACCGACCAATATCAGGAATGAAATCCTTGAGGAATCGGTGT
CAGCAAGCTCTACAGTTGACATTTGTAAGTCTGAGAAAAGTGGAACGCAGAAGCTTCAATATTGTGATATTCAACCAACAATTATTAAGAACAAGGAATTGGCTCACCCG
GTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGAAATTGCATTTCAAGATCTTTCAGGAGGAGAAAACAGCACCTTTCA
AACATTAATAAATCCGGATTGCTTTATTACAAATTCATTCGTACATCGCATTACAAACCATATGGTCGAAAGGCCCACTGTTCCAAGGATGCAGGAACTTATTCCAATTA
TATTACAATTTGTCGAAAGCCGTCAGAAACCTGGTGGTTATGTATTATTGGTAGCTCATAATGCTCGTACCTTCGACGTACCCTTTTTACTCAATGAATTCAGCCGTTAC
TCTGTTGATATTCCTCCAAATTGGCTATTTCTCGATACTATGATGTTAGCTCGTCAACTGATGAAGTTATCCGATTCGAAGATTACAAAAATAACGTTAGGAGCTCTTCG
TGAGTATTACAAAATAAAACCGGTGGGTGAAGATCATCGAGCATTGGCGGATGTGATGTCGTTGTCATCGATTCTTCAAAGGCTTACTTTCGACCTTAAGCTAGATATCT
CAGATCTCGTTGAAAGAGCTTTCACTCCTTTAGATCTGATAAATAAGAAGAAAAAATAGTGTGTTGGAGTTATGTGCACAAATCAATCTTAACTTAGTGATGAAGCTATG
CTTTTGTTGTAATGTTCTTTACTAATTGTTGCGACTTTTATTGATTCTTATTTGAACAATTTTGGGTCATTTTATGGTCAGCAGATGCTTCTCGATGTCCATATTCTCCA
AAAACGAGTGGATGAATTGAAATGTCAGGACATGGTTGTTTACAAAGAAATATGTAAGGAAGATCTTTGTTCTATTCCTTTTCTTTTTAAAATTTAATTTTAGTACAATT
GGGATTATGAAAA
Protein sequenceShow/hide protein sequence
MCFSILRFPKFGVPILANLWRENFHPLNRNQGHSYWYDQLYFRIYNLEGGQNKRWTRKSVTSKAGREAKTNPSSKPTNIRNEILEESVSASSTVDICKSEKSGTQKLQYC
DIQPTIIKNKELAHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPDCFITNSFVHRITNHMVERPTVPRMQELIPIILQFVESRQKPGGYVLLVAHNA
RTFDVPFLLNEFSRYSVDIPPNWLFLDTMMLARQLMKLSDSKITKITLGALREYYKIKPVGEDHRALADVMSLSSILQRLTFDLKLDISDLVERAFTPLDLINKKKK