; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008878 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008878
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr06:12428059..12429787
RNA-Seq ExpressionPI0008878
SyntenyPI0008878
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046247.1 uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]2.7e-7545.06Show/hide
Query:  RIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSA
        +++SFRFFNHWVED SF +VV+  W R  GVSPLVS M+NLH LKP+LR  FGRHI+ L+E+VR AK AMD AQR+VE++P S   SR A +AT+ FW+A
Subjt:  RIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSA

Query:  IRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDS--EGIRVTSHE-------------------------------------------
        +R EEASLRQKS +RWL+LGDQN+AFFHR + SR+ RN+LLS+VDS  +G RV+SH+                                           
Subjt:  IRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDS--EGIRVTSHE-------------------------------------------

Query:  ---------------------RP----------------------------------------------------------SLDFKYHHRCKKVCLTHLT
                             RP                                                             F++HHRC+KV LTHLT
Subjt:  ---------------------RP----------------------------------------------------------SLDFKYHHRCKKVCLTHLT

Query:  FADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI
        FADDLMIFC AD  SI F+R+ L++FGELSGL AN  KSS+FVAGV+ E A+ LA  MGF  G L VRYLG+PLL+GRL ++DCA LIQRITS+I
Subjt:  FADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]4.5e-7837.71Show/hide
Query:  AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAM
        AWP++ V VLPWGISDHSPILFYP+ +   +++SF FFNHWVED SF +VV+ +W R  GVSP+VS M+NLH LKP++R  FGRHI+ LSEEVR+AK A+
Subjt:  AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAM

Query:  DRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR--------------------
        D AQREVE++P S   S  AG++T+ FW+A+R EEASLRQKS +RWL+LGDQN+AFFHRS+RSR+ RN L S+VDS+G R                    
Subjt:  DRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR--------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------VTS---------------HERPSL--------------
                                                                      VTS               H R  +              
Subjt:  --------------------------------------------------------------VTS---------------HERPSL--------------

Query:  -------------DFKYHHRCKKVCLTHLTFADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYL
                      F +HHRC+KV LTHLTFADDLMIFC A+  SI F+RE L++FGELSGL AN  KSS+FVAGV+ E A+ LA  MGF  G L VRYL
Subjt:  -------------DFKYHHRCKKVCLTHLTFADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYL

Query:  GVPLLSGRLRASDCASLIQRITSRI
        G+PLL+GRLR++D A LIQRITSRI
Subjt:  GVPLLSGRLRASDCASLIQRITSRI

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]2.7e-7545.06Show/hide
Query:  RIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSA
        +++SFRFFNHWVED SF +VV+  W R  GVSPLVS M+NLH LKP+LR  FGRHI+ L+E+VR AK AMD AQR+VE++P S   SR A +AT+ FW+A
Subjt:  RIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSA

Query:  IRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDS--EGIRVTSHE-------------------------------------------
        +R EEASLRQKS +RWL+LGDQN+AFFHR + SR+ RN+LLS+VDS  +G RV+SH+                                           
Subjt:  IRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDS--EGIRVTSHE-------------------------------------------

Query:  ---------------------RP----------------------------------------------------------SLDFKYHHRCKKVCLTHLT
                             RP                                                             F++HHRC+KV LTHLT
Subjt:  ---------------------RP----------------------------------------------------------SLDFKYHHRCKKVCLTHLT

Query:  FADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI
        FADDLMIFC AD  SI F+R+ L++FGELSGL AN  KSS+FVAGV+ E A+ LA  MGF  G L VRYLG+PLL+GRL ++DCA LIQRITS+I
Subjt:  FADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI

TYK26658.1 uncharacterized protein E5676_scaffold313G003080 [Cucumis melo var. makuwa]1.5e-8139.88Show/hide
Query:  AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAM
        AWP++ V VLPWGISDHSPILFYP+ +   +++SF FFNHWVED SF +VV+ +W R  GVSP+VS M+NLH LKP++R  FGRHI+ LSEEVR+AK AM
Subjt:  AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAM

Query:  DRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR--------------------
        D AQREVE++P S   S  AG++T+ FW+A+R EEASLRQKS +RWL+LGDQN+AFFHRS+RSR+ RN L S+VDS+G R                    
Subjt:  DRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR--------------------

Query:  ----------------------VTSHERPSLD--------------------------------------------------------------------
                              + S + P  D                                                                    
Subjt:  ----------------------VTSHERPSLD--------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------------FKYHHRCKKVCLTHLTF
                                                                                           F +HH C+KV LTHLTF
Subjt:  -----------------------------------------------------------------------------------FKYHHRCKKVCLTHLTF

Query:  ADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI
        ADDLMIFC A+  SI F+RE L +FGELSGL AN  KSS+FVAGV+ E A+ LA  MGF  G L VRYLG+PLL+GRLR++D ASLIQRITSRI
Subjt:  ADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI

XP_031740402.1 uncharacterized protein LOC116403409 [Cucumis sativus]9.3e-6836.07Show/hide
Query:  LRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQ
        +RV VLPWGISDHSPIL YP+ ++ ++++SFRFFNHWV++ SF DVVSS W +   VSP+V+ ++NL +LK +LR HFGRHIR +SE+VR A + MDRA+
Subjt:  LRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQ

Query:  REVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIRVTSHER------------------
        RE+E +  S E S  A +AT  FW A+R EEA++RQKS  RWL+L DQN+AFFHRS+RSR   N L S++D +G R+T+H++                  
Subjt:  REVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIRVTSHER------------------

Query:  ----------------------------------------------PSLD------FK------------------------------------------
                                                      P  D      FK                                          
Subjt:  ----------------------------------------------PSLD------FK------------------------------------------

Query:  ------------------------------------------------------------YH-HRCKKVCLTH------------------LTFADDLMI
                                                                    YH HR K  C                     L   DDLMI
Subjt:  ------------------------------------------------------------YH-HRCKKVCLTH------------------LTFADDLMI

Query:  FCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI
        FC AD  S+ F++ET+++FGELSGL ANL KS +F+ GV+   A+ LA +MGF++G LPVRYLG+PLLS RLR+SDC  LIQRITSRI
Subjt:  FCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI

TrEMBL top hitse value%identityAlignment
A0A5A7TWG5 Reverse transcriptase domain-containing protein1.3e-7545.06Show/hide
Query:  RIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSA
        +++SFRFFNHWVED SF +VV+  W R  GVSPLVS M+NLH LKP+LR  FGRHI+ L+E+VR AK AMD AQR+VE++P S   SR A +AT+ FW+A
Subjt:  RIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSA

Query:  IRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDS--EGIRVTSHE-------------------------------------------
        +R EEASLRQKS +RWL+LGDQN+AFFHR + SR+ RN+LLS+VDS  +G RV+SH+                                           
Subjt:  IRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDS--EGIRVTSHE-------------------------------------------

Query:  ---------------------RP----------------------------------------------------------SLDFKYHHRCKKVCLTHLT
                             RP                                                             F++HHRC+KV LTHLT
Subjt:  ---------------------RP----------------------------------------------------------SLDFKYHHRCKKVCLTHLT

Query:  FADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI
        FADDLMIFC AD  SI F+R+ L++FGELSGL AN  KSS+FVAGV+ E A+ LA  MGF  G L VRYLG+PLL+GRL ++DCA LIQRITS+I
Subjt:  FADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI

A0A5A7TZS0 Reverse transcriptase domain-containing protein1.1e-6633.22Show/hide
Query:  AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAM
        AWP++R+ VLPWGISDHSPILFYP+ +   R++SFRFFNHWVE+ SF +VV+ +W R  GVS LVS M+NLH LKP+LR  FGRHI+ LSEEV  AKEAM
Subjt:  AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAM

Query:  DRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIRVTSHE---------------
        D AQREVE++P S   SR A +AT+ FW+A+R EEASLRQKS VRWL LGDQN+AFFHRS+RSR+ RN+LLS+VDS+G RV+SH+               
Subjt:  DRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIRVTSHE---------------

Query:  ---------RPSLD--------------------------------------------------------------------------------------
                  P +D                                                                                      
Subjt:  ---------RPSLD--------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------FKYHHRCKKVCLTHLTFADDLMIFCYADTASIGFVR
                                                                        F++HHRC+KV LTHLTFADDLMIFC AD  SI F+R
Subjt:  ----------------------------------------------------------------FKYHHRCKKVCLTHLTFADDLMIFCYADTASIGFVR

Query:  ETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI
        E L++FGE SGL AN  KSS+FV GV+ E A+ LA  +G +  + P            LR+ DCA LIQRITSRI
Subjt:  ETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI

A0A5A7V3Z0 Reverse transcriptase domain-containing protein2.2e-7837.71Show/hide
Query:  AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAM
        AWP++ V VLPWGISDHSPILFYP+ +   +++SF FFNHWVED SF +VV+ +W R  GVSP+VS M+NLH LKP++R  FGRHI+ LSEEVR+AK A+
Subjt:  AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAM

Query:  DRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR--------------------
        D AQREVE++P S   S  AG++T+ FW+A+R EEASLRQKS +RWL+LGDQN+AFFHRS+RSR+ RN L S+VDS+G R                    
Subjt:  DRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR--------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------VTS---------------HERPSL--------------
                                                                      VTS               H R  +              
Subjt:  --------------------------------------------------------------VTS---------------HERPSL--------------

Query:  -------------DFKYHHRCKKVCLTHLTFADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYL
                      F +HHRC+KV LTHLTFADDLMIFC A+  SI F+RE L++FGELSGL AN  KSS+FVAGV+ E A+ LA  MGF  G L VRYL
Subjt:  -------------DFKYHHRCKKVCLTHLTFADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYL

Query:  GVPLLSGRLRASDCASLIQRITSRI
        G+PLL+GRLR++D A LIQRITSRI
Subjt:  GVPLLSGRLRASDCASLIQRITSRI

A0A5D3D5X6 Reverse transcriptase domain-containing protein1.3e-7545.06Show/hide
Query:  RIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSA
        +++SFRFFNHWVED SF +VV+  W R  GVSPLVS M+NLH LKP+LR  FGRHI+ L+E+VR AK AMD AQR+VE++P S   SR A +AT+ FW+A
Subjt:  RIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSA

Query:  IRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDS--EGIRVTSHE-------------------------------------------
        +R EEASLRQKS +RWL+LGDQN+AFFHR + SR+ RN+LLS+VDS  +G RV+SH+                                           
Subjt:  IRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDS--EGIRVTSHE-------------------------------------------

Query:  ---------------------RP----------------------------------------------------------SLDFKYHHRCKKVCLTHLT
                             RP                                                             F++HHRC+KV LTHLT
Subjt:  ---------------------RP----------------------------------------------------------SLDFKYHHRCKKVCLTHLT

Query:  FADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI
        FADDLMIFC AD  SI F+R+ L++FGELSGL AN  KSS+FVAGV+ E A+ LA  MGF  G L VRYLG+PLL+GRL ++DCA LIQRITS+I
Subjt:  FADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI

A0A5D3DT20 Reverse transcriptase domain-containing protein7.2e-8239.88Show/hide
Query:  AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAM
        AWP++ V VLPWGISDHSPILFYP+ +   +++SF FFNHWVED SF +VV+ +W R  GVSP+VS M+NLH LKP++R  FGRHI+ LSEEVR+AK AM
Subjt:  AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAM

Query:  DRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR--------------------
        D AQREVE++P S   S  AG++T+ FW+A+R EEASLRQKS +RWL+LGDQN+AFFHRS+RSR+ RN L S+VDS+G R                    
Subjt:  DRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR--------------------

Query:  ----------------------VTSHERPSLD--------------------------------------------------------------------
                              + S + P  D                                                                    
Subjt:  ----------------------VTSHERPSLD--------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------------FKYHHRCKKVCLTHLTF
                                                                                           F +HH C+KV LTHLTF
Subjt:  -----------------------------------------------------------------------------------FKYHHRCKKVCLTHLTF

Query:  ADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI
        ADDLMIFC A+  SI F+RE L +FGELSGL AN  KSS+FVAGV+ E A+ LA  MGF  G L VRYLG+PLL+GRLR++D ASLIQRITSRI
Subjt:  ADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein2.6e-0723.98Show/hide
Query:  GISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGV-SPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDP
        G+SDHSP +       +R    FR+F+      +F   ++  W  ++ V S + S  ++L   K   ++   +    +  + + A ++++  Q ++  +P
Subjt:  GISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGV-SPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDP

Query:  G-SVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIRV
          S+ R          F++A    E+  RQKS ++WL+ GD N+ FFH+ I +   +N +  +   + +RV
Subjt:  G-SVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIRV

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.9e-0443.4Show/hide
Query:  VAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI
        +AGV       +  S  FA G LPVRYLG+PLL+ ++  SD   L+++I  RI
Subjt:  VAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGCCTAGTCTGCGTGTTACTGTTTTGCCTTGGGGAATTTCTGACCATTCCCCTATATTATTCTATCCTGCTGTTGAGCAGCAGAGGCGTATTATTTCGTTTCG
TTTCTTTAATCATTGGGTGGAGGATACGTCTTTCAGTGATGTGGTGTCTTCGGTTTGGGTGAGAAGGTTGGGTGTGTCTCCGTTAGTGAGTCCTATGCAAAATTTGCATG
ATCTGAAACCTGTGCTTCGTATACATTTTGGTAGACATATCAGGGGCCTTAGTGAGGAGGTGCGCTCGGCAAAAGAGGCTATGGATAGGGCCCAGAGAGAGGTTGAGCAG
GATCCTGGGTCTGTGGAGAGGAGTCGTGATGCGGGTGTTGCGACTGATGCCTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTCCGTCAGAAATCACCGGTTAGGTG
GTTGGAGCTAGGGGATCAGAATTCTGCCTTTTTTCATCGCTCGATTCGTTCTCGTATTGGTCGTAATAATTTGCTTTCTATTGTGGATTCTGAGGGTATTCGGGTGACGT
CCCATGAGAGACCCTCTTTGGATTTCAAGTATCATCATCGTTGTAAGAAGGTTTGTTTGACGCATCTGACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGACACC
GCTTCCATTGGCTTTGTGCGTGAGACTCTTCGTCAGTTTGGGGAGTTATCGGGGTTAATTGCAAATCTGGATAAGAGCTCTATGTTTGTGGCGGGGGTTGACATTGAGGC
TGCTACTGTGTTGGCTGGTAGTATGGGGTTTGCGCTGGGTACTTTGCCTGTTCGTTACTTGGGTGTTCCTTTACTCTCTGGTCGTCTACGTGCTTCAGATTGTGCCTCGC
TCATCCAGCGTATTACTAGTCGGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGGCCTAGTCTGCGTGTTACTGTTTTGCCTTGGGGAATTTCTGACCATTCCCCTATATTATTCTATCCTGCTGTTGAGCAGCAGAGGCGTATTATTTCGTTTCG
TTTCTTTAATCATTGGGTGGAGGATACGTCTTTCAGTGATGTGGTGTCTTCGGTTTGGGTGAGAAGGTTGGGTGTGTCTCCGTTAGTGAGTCCTATGCAAAATTTGCATG
ATCTGAAACCTGTGCTTCGTATACATTTTGGTAGACATATCAGGGGCCTTAGTGAGGAGGTGCGCTCGGCAAAAGAGGCTATGGATAGGGCCCAGAGAGAGGTTGAGCAG
GATCCTGGGTCTGTGGAGAGGAGTCGTGATGCGGGTGTTGCGACTGATGCCTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTCCGTCAGAAATCACCGGTTAGGTG
GTTGGAGCTAGGGGATCAGAATTCTGCCTTTTTTCATCGCTCGATTCGTTCTCGTATTGGTCGTAATAATTTGCTTTCTATTGTGGATTCTGAGGGTATTCGGGTGACGT
CCCATGAGAGACCCTCTTTGGATTTCAAGTATCATCATCGTTGTAAGAAGGTTTGTTTGACGCATCTGACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGACACC
GCTTCCATTGGCTTTGTGCGTGAGACTCTTCGTCAGTTTGGGGAGTTATCGGGGTTAATTGCAAATCTGGATAAGAGCTCTATGTTTGTGGCGGGGGTTGACATTGAGGC
TGCTACTGTGTTGGCTGGTAGTATGGGGTTTGCGCTGGGTACTTTGCCTGTTCGTTACTTGGGTGTTCCTTTACTCTCTGGTCGTCTACGTGCTTCAGATTGTGCCTCGC
TCATCCAGCGTATTACTAGTCGGATTTAG
Protein sequenceShow/hide protein sequence
MAWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQ
DPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIRVTSHERPSLDFKYHHRCKKVCLTHLTFADDLMIFCYADT
ASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI