; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008888 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008888
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionR3H domain-containing protein 1-like isoform X1
Genome locationchr08:6668562..6671755
RNA-Seq ExpressionPI0008888
SyntenyPI0008888
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001374 - R3H domain
IPR024771 - SUZ domain
IPR036867 - R3H domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54887.2 hypothetical protein Csa_012257 [Cucumis sativus]6.0e-17293.25Show/hide
Query:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
        MDSSS SSIDA PDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQ+QQ+FEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
Subjt:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK

Query:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA
        KTVEARFPTICLSQIPAKQ ADDKPGH+KIAIRPRPNKLSD+AGNCMAKQSH RTVEQRKEEYDKARARIF SQGSIG V+VL HTV +G GIPPNRDR 
Subjt:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA

Query:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ
        EDCRVNDVEKYTSV DAGNGASSR AILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNI PSFTGYHVPRN VSLGYVSPSPIKTVGLNQ
Subjt:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ

Query:  VSRPSANVPWPCAGMPYPHTAFQAPL
        VSRPSANVPWPCAGMPYPHTAFQ  L
Subjt:  VSRPSANVPWPCAGMPYPHTAFQAPL

TYK22607.1 R3H domain-containing protein 1-like isoform X1 [Cucumis melo var. makuwa]1.2e-16792.57Show/hide
Query:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
        MDSSSAS IDAFPDGLKDKVS VDPFLIE LHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
Subjt:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK

Query:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA
        KTVEARFPTICLSQIPAKQ ADDKPGH+KIA+RP+PNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIF SQ S GSVDVLSHTVT+G GIPPNRDRA
Subjt:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA

Query:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ
        EDCRVNDVEKY S  DAGNGASSR AILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNIMPSFTGYHVPRN V LGYVSPS IKTVGLNQ
Subjt:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ

Query:  VSRPSANVPWPCAGMPYPHTAFQ
        +SR SANVPWPCAGMPYPH+AFQ
Subjt:  VSRPSANVPWPCAGMPYPHTAFQ

XP_008455743.1 PREDICTED: R3H domain-containing protein 1-like isoform X1 [Cucumis melo]4.7e-17792.63Show/hide
Query:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
        MDSSSAS IDAFPDGLKDKVS VDPFLIE LHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
Subjt:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK

Query:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA
        KTVEARFPTICLSQIPAKQ ADDKPGH+KIA+RP+PNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIF SQ S GSVDVLSHTVT+G GIPPNRDRA
Subjt:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA

Query:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ
        EDCRVNDVEKY S  DAGNGASSR AILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNIMPSFTGYHVPRN V LGYVSPS IKTVGLNQ
Subjt:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ

Query:  VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN
        +SR SANVPWPCAGMPYPH+AFQAPLYQQSLSFDY+QYN
Subjt:  VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN

XP_011653850.1 uncharacterized protein LOC101216736 [Cucumis sativus]2.4e-18194.1Show/hide
Query:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
        MDSSS SSIDA PDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQ+QQ+FEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
Subjt:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK

Query:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA
        KTVEARFPTICLSQIPAKQ ADDKPGH+KIAIRPRPNKLSD+AGNCMAKQSH RTVEQRKEEYDKARARIF SQGSIG V+VL HTV +G GIPPNRDR 
Subjt:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA

Query:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ
        EDCRVNDVEKYTSV DAGNGASSR AILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNI PSFTGYHVPRN VSLGYVSPSPIKTVGLNQ
Subjt:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ

Query:  VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN
        VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN
Subjt:  VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN

XP_038883354.1 R3H domain-containing protein 1-like [Benincasa hispida]1.4e-16587.91Show/hide
Query:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
        MDSSSASSID FPD LKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQT VQDNGIDGQGRILV+
Subjt:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK

Query:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA
        KTVEARFPT+CLSQIPAKQSADDKPG +KIAIRPRPNK SDDAGNCMAKQS GR+VEQRKEEYDKARARIF SQGS GSVDVLS  +     I PNRDR 
Subjt:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA

Query:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ
        E+CRVN+VEK TSVKD GNGASSR AILRDREKDLSDPDYDRSYERYVKSLPINLTPS+NFAPFT+QN+ PSF+GYHVPRN  SL YVSPS IKTVGLNQ
Subjt:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ

Query:  VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN
        VSR SAN PWPCAGMPY HTAFQAPLY QSLSFDY+QYN
Subjt:  VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN

TrEMBL top hitse value%identityAlignment
A0A0A0L247 Uncharacterized protein1.2e-18194.1Show/hide
Query:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
        MDSSS SSIDA PDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQ+QQ+FEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
Subjt:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK

Query:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA
        KTVEARFPTICLSQIPAKQ ADDKPGH+KIAIRPRPNKLSD+AGNCMAKQSH RTVEQRKEEYDKARARIF SQGSIG V+VL HTV +G GIPPNRDR 
Subjt:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA

Query:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ
        EDCRVNDVEKYTSV DAGNGASSR AILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNI PSFTGYHVPRN VSLGYVSPSPIKTVGLNQ
Subjt:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ

Query:  VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN
        VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN
Subjt:  VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN

A0A1S3C2A6 R3H domain-containing protein 1-like isoform X12.3e-17792.63Show/hide
Query:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
        MDSSSAS IDAFPDGLKDKVS VDPFLIE LHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
Subjt:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK

Query:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA
        KTVEARFPTICLSQIPAKQ ADDKPGH+KIA+RP+PNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIF SQ S GSVDVLSHTVT+G GIPPNRDRA
Subjt:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA

Query:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ
        EDCRVNDVEKY S  DAGNGASSR AILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNIMPSFTGYHVPRN V LGYVSPS IKTVGLNQ
Subjt:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ

Query:  VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN
        +SR SANVPWPCAGMPYPH+AFQAPLYQQSLSFDY+QYN
Subjt:  VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN

A0A1S3C2V3 R3H domain-containing protein 1-like isoform X25.5e-15592.59Show/hide
Query:  MELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDD
        MELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLSQIPAKQ ADDKPGH+KIA+RP+PNKLSDD
Subjt:  MELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDD

Query:  AGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDR
        AGNCMAKQSHGRTVEQRKEEYDKARARIF SQ S GSVDVLSHTVT+G GIPPNRDRAEDCRVNDVEKY S  DAGNGASSR AILRDREKDLSDPDYDR
Subjt:  AGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDR

Query:  SYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQVSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN
        SYERYVKSLPINLTPSLNF PFT QNIMPSFTGYHVPRN V LGYVSPS IKTVGLNQ+SR SANVPWPCAGMPYPH+AFQAPLYQQSLSFDY+QYN
Subjt:  SYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQVSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN

A0A5A7SJ76 R3H domain-containing protein 1-like isoform X12.3e-17792.63Show/hide
Query:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
        MDSSSAS IDAFPDGLKDKVS VDPFLIE LHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
Subjt:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK

Query:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA
        KTVEARFPTICLSQIPAKQ ADDKPGH+KIA+RP+PNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIF SQ S GSVDVLSHTVT+G GIPPNRDRA
Subjt:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA

Query:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ
        EDCRVNDVEKY S  DAGNGASSR AILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNIMPSFTGYHVPRN V LGYVSPS IKTVGLNQ
Subjt:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ

Query:  VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN
        +SR SANVPWPCAGMPYPH+AFQAPLYQQSLSFDY+QYN
Subjt:  VSRPSANVPWPCAGMPYPHTAFQAPLYQQSLSFDYLQYN

A0A5D3DFX8 R3H domain-containing protein 1-like isoform X15.6e-16892.57Show/hide
Query:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
        MDSSSAS IDAFPDGLKDKVS VDPFLIE LHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK
Subjt:  MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVK

Query:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA
        KTVEARFPTICLSQIPAKQ ADDKPGH+KIA+RP+PNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIF SQ S GSVDVLSHTVT+G GIPPNRDRA
Subjt:  KTVEARFPTICLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRA

Query:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ
        EDCRVNDVEKY S  DAGNGASSR AILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNIMPSFTGYHVPRN V LGYVSPS IKTVGLNQ
Subjt:  EDCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQ

Query:  VSRPSANVPWPCAGMPYPHTAFQ
        +SR SANVPWPCAGMPYPH+AFQ
Subjt:  VSRPSANVPWPCAGMPYPHTAFQ

SwissProt top hitse value%identityAlignment
A0JNC2 R3H domain-containing protein 21.7e-0729.11Show/hide
Query:  FLIEAL-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVKKTVEARFPTICLSQIPAKQSA
        FL+  L  NPR R+ +L++E +I  F+ +   Q   F+ FP  TSY R+  HRVA ++G+     D+ +D  G+ +++ KT   R P     Q  ++   
Subjt:  FLIEAL-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVKKTVEARFPTICLSQIPAKQSA

Query:  DDKPGHI--KIAIRPRPNKLSDDAGNCMAKQSHGR---TVEQRKEEYDKARARIFGSQ
        D+K      +  ++     +  D          GR   ++E+R+EEY + R RIF  +
Subjt:  DDKPGHI--KIAIRPRPNKLSDDAGNCMAKQSHGR---TVEQRKEEYDKARARIFGSQ

Q15032 R3H domain-containing protein 16.1e-1026.87Show/hide
Query:  FLIEAL-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVKKTVEARFPTICLSQIPAKQSADD
        FL+  L +NPR R+ +L++E +I  F+ N E    +F    TSY R+  HRVA ++GL     D+ +D  G+ ++V KT   R P     Q   +   DD
Subjt:  FLIEAL-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVKKTVEARFPTICLSQIPAKQSADD

Query:  KPGHI-KIAIRPRPNKLSDDAGNCM----AKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEKYTSVKDAG
        K     K  I  R N   D   N M          +++E+R+EEY +AR RIF         + +     +       + R +  RVN        KDA 
Subjt:  KPGHI-KIAIRPRPNKLSDDAGNCM----AKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEKYTSVKDAG

Query:  NGASSRFAILRDREKDLSDP------DYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNG------VSLGYVSPSPIKTVGLNQVSRPS-
          +++      + E   S+P      D D S          NL P++  A         SF+G  V   G       S+G +S +  ++ G    S  S 
Subjt:  NGASSRFAILRDREKDLSDP------DYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNG------VSLGYVSPSPIKTVGLNQVSRPS-

Query:  ANVPWPCAGMPYPHTAFQAPLY------QQSLSFD
        +++  P  G     ++  AP+         SLSFD
Subjt:  ANVPWPCAGMPYPHTAFQAPLY------QQSLSFD

Q80TM6 R3H domain-containing protein 21.7e-0729.11Show/hide
Query:  FLIEAL-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVKKTVEARFPTICLSQIPAKQSA
        FL+  L  NPR R+ +L++E +I  F+ +   Q   F+ FP  TSY R+  HRVA ++G+     D+ +D  G+ +++ KT   R P     Q  ++   
Subjt:  FLIEAL-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVKKTVEARFPTICLSQIPAKQSA

Query:  DDKPGHI--KIAIRPRPNKLSDDAGNCMAKQSHGR---TVEQRKEEYDKARARIFGSQ
        D+K      +  ++     +  D          GR   ++E+R+EEY + R RIF  +
Subjt:  DDKPGHI--KIAIRPRPNKLSDDAGNCMAKQSHGR---TVEQRKEEYDKARARIFGSQ

Q9Y2K5 R3H domain-containing protein 23.4e-0535.63Show/hide
Query:  FLIEAL-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVKKTVEARFP
        FL+  L  NPR R+ +L++E +I  F+ +   Q   F+ FP  TSY R+  HRVA ++G+     D+ +D  G+ +++ KT   R P
Subjt:  FLIEAL-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVKKTVEARFP

Arabidopsis top hitse value%identityAlignment
AT2G40960.1 Single-stranded nucleic acid binding R3H protein3.8e-6847.79Show/hide
Query:  LKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVKKTVEARFPTICLSQ
        + DK   VDPFL+EAL NPRHRLTILRMELD+QRFLQ+ +QQ FEFQHFPTSYLR AAHRVA HYGL T V+D G DG + RI+V K+ ++RFP   LS+
Subjt:  LKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVKKTVEARFPTICLSQ

Query:  IPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEKYTSV
        IP KQS   K  H+K+ I+PRP K S   G+ + K    ++VE+RKE+YD+ARARIF    +I   D  S T         +RD  +  +  ++E   + 
Subjt:  IPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEKYTSV

Query:  KDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMP-----SFTGYH-VPRNGVSLGYVS-PSPIKTVGLNQVSRPSA-
            +  +SR AILRDREKD  DPDYDRS  RY+ +LP++   +L  A F +Q +        F GY       ++LG  S  SP  T GLNQ SR +A 
Subjt:  KDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMP-----SFTGYH-VPRNGVSLGYVS-PSPIKTVGLNQVSRPSA-

Query:  NVPWP-CAGMPYPH-------TAFQAPLYQQSLSFDYLQ
         + WP  A + Y H       + FQA  Y Q LSFDY+Q
Subjt:  NVPWP-CAGMPYPH-------TAFQAPLYQQSLSFDYLQ

AT3G10770.1 Single-stranded nucleic acid binding R3H protein7.0e-6248.42Show/hide
Query:  LKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVKKTVEARFPTIC
        + +K + VDPFL+EAL NPRHRLTILRMELDIQ+F QN EQ  FEF  FPTSYLRLAAHRVAQHYGL TM  DNG    DG   RILV KT E+RFP +C
Subjt:  LKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVKKTVEARFPTIC

Query:  LSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGN-CMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEK
        LS+IP KQ  + +P   KIAI+PRP + S   G+    +Q+  R+VE+RKEEYDKARARIF S  S  S D  S         PP+ +    C +N  E 
Subjt:  LSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGN-CMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEK

Query:  YTSVKDA-------GNGASSRFAILRDREKDLSDPDYDRSYERYVKSLP---INLTPS-LNFAPFTVQNIMPSFTGY--HVPR-NGVSLGYVSP-SPIKT
          +V ++        +G +SR AI+RDREKD  DPDYDRSY+RYV       + + PS  +F+P  +   +P   G+  H+PR +  +L Y  P +P  +
Subjt:  YTSVKDA-------GNGASSRFAILRDREKDLSDPDYDRSYERYVKSLP---INLTPS-LNFAPFTVQNIMPSFTGY--HVPR-NGVSLGYVSP-SPIKT

Query:  VGLNQVSRPSANVPWP
           + V   ++  PWP
Subjt:  VGLNQVSRPSANVPWP

AT3G10770.2 Single-stranded nucleic acid binding R3H protein4.9e-6348.72Show/hide
Query:  LKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVKKTVEARFPTIC
        + +K + VDPFL+EAL NPRHRLTILRMELDIQ+F QN EQ  FEF  FPTSYLRLAAHRVAQHYGL TM  DNG    DG   RILV KT E+RFP +C
Subjt:  LKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVKKTVEARFPTIC

Query:  LSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGN-CMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEK
        LS+IP KQ  + +P   KIAI+PRP + S   G+    +Q+  R+VE+RKEEYDKARARIF S  S  S D  S         PP+ +    C +N  E 
Subjt:  LSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGN-CMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEK

Query:  YTSVKDA-------GNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGY--HVPR-NGVSLGYVSP-SPIKTVGLN
          +V ++        +G +SR AI+RDREKD  DPDYDRSY+RYV+ +P       +F+P  +   +P   G+  H+PR +  +L Y  P +P  +   +
Subjt:  YTSVKDA-------GNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGY--HVPR-NGVSLGYVSP-SPIKTVGLN

Query:  QVSRPSANVPWP
         V   ++  PWP
Subjt:  QVSRPSANVPWP

AT3G56680.1 Single-stranded nucleic acid binding R3H protein1.8e-7048.34Show/hide
Query:  VDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVKKTVEARFPTICLSQIP-AKQS
        VDPFL+EALHN RHRLTILRMELD+QR LQN EQQ FEFQHFPTSYLRLAAHRVA HYGL T VQ++G DG + RILV KT E++FP + LS+IP AKQS
Subjt:  VDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVKKTVEARFPTICLSQIP-AKQS

Query:  ADDKPGHIKIAIRPRPNKLSD-DAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEKYTSVKDAGN
         + K    K++I+ RP+K S   AG+    +   R+VE+RKEEYDKAR RIF     +   D  S T         +RD  +  +   VE   ++    +
Subjt:  ADDKPGHIKIAIRPRPNKLSD-DAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEKYTSVKDAGN

Query:  GASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMP-----SFTGYH-VPRNGVSLGYVSPSPIKTVGLNQVSRPSANVPWPCA
        G +SR AI RDREKD  DPDYDR ++RY++SLP+N   + N  PF +Q I        FTGY+ +P     LG+  P P   +     +  +  + WP A
Subjt:  GASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMP-----SFTGYH-VPRNGVSLGYVSPSPIKTVGLNQVSRPSANVPWPCA

Query:  GMPYPHT-------AFQAPLYQQSLSFDYLQ
         M Y H        + QA   QQ LSFDY+Q
Subjt:  GMPYPHT-------AFQAPLYQQSLSFDYLQ

AT5G05100.1 Single-stranded nucleic acid binding R3H protein3.5e-6146.27Show/hide
Query:  LKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGL-QTMVQDNGIDGQG-RILVKKTVEARFPTICLS
        + DK + VDPFL+EAL NPRHRLTILRMELDIQ+F Q+ EQQ +EFQ  PTSYLRL AHRVAQHYGL  T ++  G+DG G RIL  KTVE+R+P +CLS
Subjt:  LKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGL-QTMVQDNGIDGQG-RILVKKTVEARFPTICLS

Query:  QIPAKQ-SADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSH-GRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTV--------TKGHGIPPNRDRAE--
        +IP KQ     +P   KIAI+PRPN+ +  +G+    + +  R+VE+RKEEYDKARARIF S  S  S D  +           +K +   P+R+  E  
Subjt:  QIPAKQ-SADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSH-GRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTV--------TKGHGIPPNRDRAE--

Query:  ---DCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGL
           +    DVE+   ++D+G   +SR AI+RDREKD  DPDYDR+  RYV+  P    P  NF P  +           +PR   SL Y  P       L
Subjt:  ---DCRVNDVEKYTSVKDAGNGASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGL

Query:  NQVSRPSANVPWPCAGMPYPHT
        N      +   WP A M Y  T
Subjt:  NQVSRPSANVPWPCAGMPYPHT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCTCTTCAGCTTCTTCCATTGATGCCTTTCCAGATGGGCTCAAAGATAAAGTCTCAACGGTTGACCCATTTTTGATCGAAGCCCTTCACAACCCTCGACACCG
TCTAACCATTCTGCGGATGGAACTTGATATTCAAAGGTTTTTGCAAAACCAAGAGCAGCAGGTGTTTGAGTTCCAACACTTTCCTACTTCGTACCTTCGACTCGCAGCTC
ACCGTGTTGCTCAACATTATGGTCTGCAGACAATGGTTCAGGATAACGGGATAGATGGACAAGGGAGAATTTTGGTGAAGAAAACTGTTGAAGCTAGATTCCCGACCATT
TGCTTATCTCAAATACCTGCAAAACAATCTGCTGATGATAAACCTGGGCACATTAAAATTGCTATTAGGCCGAGGCCGAATAAGTTGTCTGATGATGCAGGTAATTGTAT
GGCTAAGCAAAGTCATGGTAGGACTGTGGAGCAGAGGAAGGAAGAGTATGATAAGGCACGTGCTCGAATATTCGGCAGCCAAGGTAGTATTGGTTCAGTGGATGTATTGT
CCCATACTGTCACCAAGGGGCATGGTATACCTCCAAACAGAGATAGGGCGGAAGATTGTAGAGTGAACGATGTTGAGAAGTATACGAGTGTTAAAGATGCTGGGAATGGG
GCTTCTTCTCGGTTTGCCATTTTAAGAGATAGGGAAAAGGATCTTAGCGACCCAGATTATGATCGGAGTTATGAAAGGTATGTTAAGAGCCTTCCAATTAATCTGACTCC
GAGCTTGAATTTTGCTCCTTTCACCGTGCAAAACATCATGCCTTCATTTACCGGTTACCATGTACCAAGGAACGGGGTTTCATTGGGCTATGTTTCTCCTTCACCAATCA
AGACTGTAGGATTGAATCAGGTGTCTAGACCGTCAGCCAATGTGCCCTGGCCATGTGCAGGGATGCCATACCCACATACCGCTTTCCAGGCTCCATTGTATCAACAGTCT
TTGAGTTTTGATTATTTGCAATACAATTGA
mRNA sequenceShow/hide mRNA sequence
GTAAGTTTTAATTTCGGATAAGGAATCTAAAATTTTCTTTTCTTTTGCTATAAAATCGTCAATTTCCCCTCCGTCGTTGAGCCCCTTTTCCCCCTTTTGCAGGGATAAGA
AGATTTCTCCACACTTCTCTCTCAGTTTCTTGAAGAACAAGAAGAAGTGAGAACCATGGATTCCTCTTCAGCTTCTTCCATTGATGCCTTTCCAGATGGGCTCAAAGATA
AAGTCTCAACGGTTGACCCATTTTTGATCGAAGCCCTTCACAACCCTCGACACCGTCTAACCATTCTGCGGATGGAACTTGATATTCAAAGGTTTTTGCAAAACCAAGAG
CAGCAGGTGTTTGAGTTCCAACACTTTCCTACTTCGTACCTTCGACTCGCAGCTCACCGTGTTGCTCAACATTATGGTCTGCAGACAATGGTTCAGGATAACGGGATAGA
TGGACAAGGGAGAATTTTGGTGAAGAAAACTGTTGAAGCTAGATTCCCGACCATTTGCTTATCTCAAATACCTGCAAAACAATCTGCTGATGATAAACCTGGGCACATTA
AAATTGCTATTAGGCCGAGGCCGAATAAGTTGTCTGATGATGCAGGTAATTGTATGGCTAAGCAAAGTCATGGTAGGACTGTGGAGCAGAGGAAGGAAGAGTATGATAAG
GCACGTGCTCGAATATTCGGCAGCCAAGGTAGTATTGGTTCAGTGGATGTATTGTCCCATACTGTCACCAAGGGGCATGGTATACCTCCAAACAGAGATAGGGCGGAAGA
TTGTAGAGTGAACGATGTTGAGAAGTATACGAGTGTTAAAGATGCTGGGAATGGGGCTTCTTCTCGGTTTGCCATTTTAAGAGATAGGGAAAAGGATCTTAGCGACCCAG
ATTATGATCGGAGTTATGAAAGGTATGTTAAGAGCCTTCCAATTAATCTGACTCCGAGCTTGAATTTTGCTCCTTTCACCGTGCAAAACATCATGCCTTCATTTACCGGT
TACCATGTACCAAGGAACGGGGTTTCATTGGGCTATGTTTCTCCTTCACCAATCAAGACTGTAGGATTGAATCAGGTGTCTAGACCGTCAGCCAATGTGCCCTGGCCATG
TGCAGGGATGCCATACCCACATACCGCTTTCCAGGCTCCATTGTATCAACAGTCTTTGAGTTTTGATTATTTGCAATACAATTGAATACAGCAGTTAGGAAATAGTGTTA
ATTAAAAACTGATTTACTCAGCTAACTATATACTCATTTTGTTGGTTCCAAAACCTCCCATTGTAATCAATTGTTTTAAATTAAACTCTTTTATTTA
Protein sequenceShow/hide protein sequence
MDSSSASSIDAFPDGLKDKVSTVDPFLIEALHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVKKTVEARFPTI
CLSQIPAKQSADDKPGHIKIAIRPRPNKLSDDAGNCMAKQSHGRTVEQRKEEYDKARARIFGSQGSIGSVDVLSHTVTKGHGIPPNRDRAEDCRVNDVEKYTSVKDAGNG
ASSRFAILRDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIMPSFTGYHVPRNGVSLGYVSPSPIKTVGLNQVSRPSANVPWPCAGMPYPHTAFQAPLYQQS
LSFDYLQYN