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PI0008895 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008895
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLate embryogenesis abundant protein
Genome locationchr01:27248826..27249916
RNA-Seq ExpressionPI0008895
SyntenyPI0008895
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461081.1 PREDICTED: late embryogenesis abundant protein D-7 [Cucumis melo]8.3e-5191.41Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEA
        MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRA +DK HGAADSTKEWASDTAQA REKAQ+GKETTGGILEQTGEKVKSMAQGAAEA
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEA

Query:  VKSTFGM-GQHDDEVDKG-TDTTTYRRV
        VKSTFGM  Q+DD+VDKG TD TTYRRV
Subjt:  VKSTFGM-GQHDDEVDKG-TDTTTYRRV

XP_011659535.1 late embryogenesis abundant protein D-7 [Cucumis sativus]7.1e-5088.1Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEA
        MASHNQSYRAGETKGRAEEKTNQAMG MGEKAREAKEKTYETGRAAR+K HGAADSTKEWASD AQ  REKAQ+GKETTGGILEQTGEKVKSMAQGAAEA
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEA

Query:  VKSTFGMGQHDDEVDKGTDTTTYRRV
        VKSTFGM QHD++VDK ++ TT RRV
Subjt:  VKSTFGMGQHDDEVDKGTDTTTYRRV

XP_022150150.1 late embryogenesis abundant protein Dc3-like [Momordica charantia]3.3e-3973.53Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGA-----------ADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEK
        MA+H+Q +RAGETKGRAEEKTNQ M TMGEKARE K+KTYETGRAARDK   +           A +TKE ASD AQAAREKAQSGKE TGGILEQTGEK
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGA-----------ADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEK

Query:  VKSMAQGAAEAVKSTFGMGQHDDEVDKGTDTTTYRR
        VKSMAQGAA+AVKSTFGM QHDD+VDK +D TT  R
Subjt:  VKSMAQGAAEAVKSTFGMGQHDDEVDKGTDTTTYRR

XP_023548700.1 late embryogenesis abundant protein 7 [Cucurbita pepo subsp. pepo]1.8e-4580.58Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWA-----------SDTAQAAREKAQSGKETTGGILEQTGEK
        MASHNQSY+AGETKGRAEEKT+QAMGTMG+KAREAKEKTYETG+AA+DK HGAA+STKEWA           SD AQAAREKAQSGKETTGGILEQTGEK
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWA-----------SDTAQAAREKAQSGKETTGGILEQTGEK

Query:  VKSMAQGAAEAVKSTFGMGQHDDEVDK---GTDTTTYRR
        VKSMAQGAAEAVKSTFGM  HDD+V K   G+DTTTYRR
Subjt:  VKSMAQGAAEAVKSTFGMGQHDDEVDK---GTDTTTYRR

XP_038899464.1 LOW QUALITY PROTEIN: late embryogenesis abundant protein 2-like [Benincasa hispida]5.4e-5090.98Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEA
        MASHNQSYRAGETKGRAEEKTN+ MGTMG+KAREAKEKTYETGRAAR+K HGAADSTKEWASDTAQ AREKAQSGKETTGGILEQTGEKVKSMAQGAA+A
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEA

Query:  VKSTFGMGQHDDEVDKGTDTTT
        VKSTFGM QHDDEVDK +D TT
Subjt:  VKSTFGMGQHDDEVDKGTDTTT

TrEMBL top hitse value%identityAlignment
A0A0A0K6E1 Uncharacterized protein1.0e-6275.53Show/hide
Query:  MVLPFSTKSVQHKAAASHNKARRKLINMLDFMAYYTNKSSKNYLGK--KKAKVQFIKGEGKKMASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEK
        MVLP S KSVQHK A SHNKA                K +K+  GK  +KAKV FIK EG+KMASHNQSYRAGETKGRAEEKTNQAMG MGEKAREAKEK
Subjt:  MVLPFSTKSVQHKAAASHNKARRKLINMLDFMAYYTNKSSKNYLGK--KKAKVQFIKGEGKKMASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEK

Query:  TYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMGQHDDEVDKGTDTTTYRRV
        TYETGRAAR+K HGAADSTKEWASD AQ  REKAQ+GKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM QHD++VDK ++ TT RRV
Subjt:  TYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMGQHDDEVDKGTDTTTYRRV

A0A1S3CEC9 late embryogenesis abundant protein D-74.0e-5191.41Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEA
        MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRA +DK HGAADSTKEWASDTAQA REKAQ+GKETTGGILEQTGEKVKSMAQGAAEA
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEA

Query:  VKSTFGM-GQHDDEVDKG-TDTTTYRRV
        VKSTFGM  Q+DD+VDKG TD TTYRRV
Subjt:  VKSTFGM-GQHDDEVDKG-TDTTTYRRV

A0A5A7UUB6 Late embryogenesis abundant protein D-74.0e-5191.41Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEA
        MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRA +DK HGAADSTKEWASDTAQA REKAQ+GKETTGGILEQTGEKVKSMAQGAAEA
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEA

Query:  VKSTFGM-GQHDDEVDKG-TDTTTYRRV
        VKSTFGM  Q+DD+VDKG TD TTYRRV
Subjt:  VKSTFGM-GQHDDEVDKG-TDTTTYRRV

A0A6J1D7P2 late embryogenesis abundant protein Dc3-like1.6e-3973.53Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGA-----------ADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEK
        MA+H+Q +RAGETKGRAEEKTNQ M TMGEKARE K+KTYETGRAARDK   +           A +TKE ASD AQAAREKAQSGKE TGGILEQTGEK
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGA-----------ADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEK

Query:  VKSMAQGAAEAVKSTFGMGQHDDEVDKGTDTTTYRR
        VKSMAQGAA+AVKSTFGM QHDD+VDK +D TT  R
Subjt:  VKSMAQGAAEAVKSTFGMGQHDDEVDKGTDTTTYRR

A0A6J1GPH8 late embryogenesis abundant protein 71.0e-3371.2Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEA
        MASHNQSY+AGETKGRAEEKT+QAMGTMG+KA  A E T E  + ++D+       T  + SD AQAAREKAQSGKETTGGILEQTGEKVKSMAQGAA+A
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEA

Query:  VKSTFGMGQHDDEVDKGTDTTTYRR
        VKSTFGM   DD   +G+DTTTYRR
Subjt:  VKSTFGMGQHDDEVDKGTDTTTYRR

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 17.9e-2041.76Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEK--------------------------------------------TYETGRAARDKTHGAADS
        MASH+QSY+AGET GR EEKTNQ +G + +KA+ AKEK                                            T +T +AA+DKT    ++
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEK--------------------------------------------TYETGRAARDKTHGAADS

Query:  TKEWASDTAQAAREK-----------AQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMGQHDDEVD
        TKE A DT   AREK           AQSGK+ + G L+QTGEKVK MAQGA +AVK TFGM   D + D
Subjt:  TKEWASDTAQAAREK-----------AQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMGQHDDEVD

O49817 Late embryogenesis abundant protein 23.2e-2146.62Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEK----------------------AREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREK-------
        M SH+QSYRAGE KGR EEKTNQ +G + +K                      A+ AKEKT +T +AA+DKT     +TKE A DT   A+EK       
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEK----------------------AREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREK-------

Query:  ----AQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMGQHDDEVD
            AQSGK+ + G L+QTGEK K MAQGA +AVK TFGM   D + D
Subjt:  ----AQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMGQHDDEVD

P13939 Late embryogenesis abundant protein D-79.3e-2149.62Show/hide
Query:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEK-----------AREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEK
        MASH QSY+AG  +GRA EK  Q   +M EK           A  AK+KT ET  AA+ KT GAA++T +    TA AAR KA+  KET+GGIL+Q GEK
Subjt:  MASHNQSYRAGETKGRAEEKTNQAMGTMGEK-----------AREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEK

Query:  VKSMAQGAAEAVKSTFGMGQHDDEVDKGTDTTT
        V++ AQGA +AVK TFGM   D++      T T
Subjt:  VKSMAQGAAEAVKSTFGMGQHDDEVDKGTDTTT

P83442 Late embryogenesis abundant protein Dc31.5e-1843.67Show/hide
Query:  MASH-NQSYRAGETKGRAEEKTNQAMGTMGEKAREA---------------------------------KEKTYETGRAARDKTHGAADSTKEWASDTAQ
        MASH +QSY+AGE KG A+EKT Q   TM +KA+ A                                 K+KT ET +AA++KT GA  +TKE AS+  +
Subjt:  MASH-NQSYRAGETKGRAEEKTNQAMGTMGEKAREA---------------------------------KEKTYETGRAARDKTHGAADSTKEWASDTAQ

Query:  AAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMGQHDDEVDKGTDTTTYR
        +A+E A +GKE TGG++    E+VK MAQGA EAVK+TFGM   D+E +K T T   R
Subjt:  AAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMGQHDDEVDKGTDTTTYR

Q96270 Late embryogenesis abundant protein 75.1e-1942.07Show/hide
Query:  MASH-NQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQ--------------------------
        MASH  QSY+AGET+G+A+EKT +AMGTMG+K + AK+KT ET ++A+ K H  A S K+  S  AQ  +E+AQ                          
Subjt:  MASH-NQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQ--------------------------

Query:  -------SGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM------GQHDDEVDKGTDTTTYR
               +GKE T GIL QTGE+VK MA GA +AVK T G+       +H       T TTT R
Subjt:  -------SGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM------GQHDDEVDKGTDTTTYR

Arabidopsis top hitse value%identityAlignment
AT1G52690.1 Late embryogenesis abundant protein (LEA) family protein3.6e-2042.07Show/hide
Query:  MASH-NQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQ--------------------------
        MASH  QSY+AGET+G+A+EKT +AMGTMG+K + AK+KT ET ++A+ K H  A S K+  S  AQ  +E+AQ                          
Subjt:  MASH-NQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQ--------------------------

Query:  -------SGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM------GQHDDEVDKGTDTTTYR
               +GKE T GIL QTGE+VK MA GA +AVK T G+       +H       T TTT R
Subjt:  -------SGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM------GQHDDEVDKGTDTTTYR

AT1G52690.2 Late embryogenesis abundant protein (LEA) family protein3.6e-2042.07Show/hide
Query:  MASH-NQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQ--------------------------
        MASH  QSY+AGET+G+A+EKT +AMGTMG+K + AK+KT ET ++A+ K H  A S K+  S  AQ  +E+AQ                          
Subjt:  MASH-NQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQ--------------------------

Query:  -------SGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM------GQHDDEVDKGTDTTTYR
               +GKE T GIL QTGE+VK MA GA +AVK T G+       +H       T TTT R
Subjt:  -------SGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM------GQHDDEVDKGTDTTTYR

AT3G15670.1 Late embryogenesis abundant protein (LEA) family protein3.2e-1646.97Show/hide
Query:  EGKKMASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKT----YETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKS
        E     +     +A ET   A+EKT+QA    G+KAREAK+K      ETG A ++K   AA  TKE A   AQ  +E A++G++ TGG L QTGE VK 
Subjt:  EGKKMASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKT----YETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKS

Query:  MAQGAAEAVKSTFGMG--QHDDEVDKGTDTTT
        MA GAA+AVK TFGM   + D E   G+ TTT
Subjt:  MAQGAAEAVKSTFGMG--QHDDEVDKGTDTTT

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein2.6e-1036.54Show/hide
Query:  QSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTF
        Q + AG+ +G+A+EK  Q   +  + A+ A +KT +  ++ARDK      S ++  +D + +A + AQ  +E   G+  QTGE VK+MAQGA + VK++ 
Subjt:  QSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTF

Query:  GMGQ
        GM +
Subjt:  GMGQ

AT4G21020.1 Late embryogenesis abundant protein (LEA) family protein2.8e-0429.3Show/hide
Query:  QHKAAASHNKARRKLINMLDFMAYYTNKSSKNYLGKKKAKVQFIKGEGKKMASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEK----TYETGRAA
        ++ A A+ +KA        D  AY T + +K+   + K K         K  ++N   +A +   R ++K N+      +KA + KEK      +T   A
Subjt:  QHKAAASHNKARRKLINMLDFMAYYTNKSSKNYLGKKKAKVQFIKGEGKKMASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEK----TYETGRAA

Query:  RDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKS
        ++K   A +  KE+  DT    +EKA+  KET  G  E+ GEK K   +GA E+ K+
Subjt:  RDKTHGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTGCCATTTTCTACAAAATCAGTGCAGCACAAAGCAGCAGCATCCCACAACAAGGCACGTCGGAAGCTTATTAATATGCTCGATTTCATGGCTTATTACACTAA
CAAATCAAGCAAAAATTACTTGGGAAAAAAAAAAGCTAAAGTCCAATTCATAAAAGGAGAGGGAAAAAAAATGGCATCCCACAATCAGAGCTATAGAGCTGGTGAAACCA
AGGGACGAGCTGAGGAAAAAACTAATCAAGCGATGGGTACAATGGGGGAGAAGGCCCGAGAAGCAAAGGAGAAAACATACGAGACAGGGCGGGCCGCAAGGGACAAGACC
CATGGAGCAGCGGACTCAACAAAAGAATGGGCCTCAGATACGGCCCAAGCGGCCCGTGAGAAGGCCCAATCCGGAAAAGAAACGACGGGAGGGATTCTGGAGCAGACAGG
AGAGAAAGTGAAGAGTATGGCACAAGGAGCAGCGGAAGCAGTTAAAAGCACTTTTGGTATGGGCCAGCATGATGATGAGGTGGACAAAGGCACTGACACCACCACTTATC
GTAGGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTGCCATTTTCTACAAAATCAGTGCAGCACAAAGCAGCAGCATCCCACAACAAGGCACGTCGGAAGCTTATTAATATGCTCGATTTCATGGCTTATTACACTAA
CAAATCAAGCAAAAATTACTTGGGAAAAAAAAAAGCTAAAGTCCAATTCATAAAAGGAGAGGGAAAAAAAATGGCATCCCACAATCAGAGCTATAGAGCTGGTGAAACCA
AGGGACGAGCTGAGGAAAAAACTAATCAAGCGATGGGTACAATGGGGGAGAAGGCCCGAGAAGCAAAGGAGAAAACATACGAGACAGGGCGGGCCGCAAGGGACAAGACC
CATGGAGCAGCGGACTCAACAAAAGAATGGGCCTCAGATACGGCCCAAGCGGCCCGTGAGAAGGCCCAATCCGGAAAAGAAACGACGGGAGGGATTCTGGAGCAGACAGG
AGAGAAAGTGAAGAGTATGGCACAAGGAGCAGCGGAAGCAGTTAAAAGCACTTTTGGTATGGGCCAGCATGATGATGAGGTGGACAAAGGCACTGACACCACCACTTATC
GTAGGGTTTAATTCGTAAAGATTGGATCCCCTGTCCCGCCGAAATGTAGCAGTTGTTTTTGTTTCATGTGGTTCGTGTTTGTGTCTTTTTTGTTTGGTTGTTGTAATGTT
GAAGAAAATGCTTCCTCCCTTTTTGTTGGAGAAGGTGTTTGTATTTTGTTTTTAACTTTGAATAATAGCATCCTTTCATCTCTTTA
Protein sequenceShow/hide protein sequence
MVLPFSTKSVQHKAAASHNKARRKLINMLDFMAYYTNKSSKNYLGKKKAKVQFIKGEGKKMASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAARDKT
HGAADSTKEWASDTAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMGQHDDEVDKGTDTTTYRRV