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PI0008908 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008908
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRT_RNaseH domain-containing protein
Genome locationchr06:12260476..12260757
RNA-Seq ExpressionPI0008908
SyntenyPI0008908
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062402.1 uncharacterized protein E6C27_scaffold154G001950 [Cucumis melo var. makuwa]7.7e-2974.19Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL
        MPSYVKFLKDILAKK R+ND +T+AL Q T+DVF+NGVP KMTDP SF + CSIG MDLG  LYDL ASINLM L IFKKL MGEV PT +RL
Subjt:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL

TYJ99636.1 uncharacterized protein E5676_scaffold562G00080 [Cucumis melo var. makuwa]9.0e-3075.27Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL
        MPSY+KFLK ILAKKR++ND ET+ALTQ T+DVFKNGVP+KMTD GSF V CSIGGMDLGRALY LGASINLM L IFKKL + EV  + +RL
Subjt:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL

TYK11898.1 uncharacterized protein E5676_scaffold177G00610 [Cucumis melo var. makuwa]1.8e-3077.42Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL
        MP YVKFLKDILAKKRRMN  E +AL+QAT DVF NG  EKMTDP SF +PCSIGGMDLGRA  DLGASINLM LSIFKKLG+GEV PT + L
Subjt:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL

XP_008455671.1 PREDICTED: uncharacterized protein LOC103495785 [Cucumis melo]9.0e-3075.27Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL
        MPSY+KFLK ILAKKR++ND ET+ALTQ T+DVFKNGVP+KMTD GSF V CSIGGMDLGRALY LGASINLM L IFKKL + EV  + +RL
Subjt:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL

XP_016902557.1 PREDICTED: uncharacterized protein LOC107991723 [Cucumis melo]9.0e-3075.27Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL
        MPSYVKFLKDILAKK R+ND +T+AL Q T+DVF+NGVP KMTDP SF + CSIG MDLG  LYDLGASINLM L IFKKL MGEV PT +RL
Subjt:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL

TrEMBL top hitse value%identityAlignment
A0A1S3C108 uncharacterized protein LOC1034957854.4e-3075.27Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL
        MPSY+KFLK ILAKKR++ND ET+ALTQ T+DVFKNGVP+KMTD GSF V CSIGGMDLGRALY LGASINLM L IFKKL + EV  + +RL
Subjt:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL

A0A1S4E2V6 uncharacterized protein LOC1079917234.4e-3075.27Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL
        MPSYVKFLKDILAKK R+ND +T+AL Q T+DVF+NGVP KMTDP SF + CSIG MDLG  LYDLGASINLM L IFKKL MGEV PT +RL
Subjt:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL

A0A5A7V2G5 Uncharacterized protein3.7e-2974.19Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL
        MPSYVKFLKDILAKK R+ND +T+AL Q T+DVF+NGVP KMTDP SF + CSIG MDLG  LYDL ASINLM L IFKKL MGEV PT +RL
Subjt:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL

A0A5D3BKH1 Uncharacterized protein4.4e-3075.27Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL
        MPSY+KFLK ILAKKR++ND ET+ALTQ T+DVFKNGVP+KMTD GSF V CSIGGMDLGRALY LGASINLM L IFKKL + EV  + +RL
Subjt:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL

A0A5D3CL71 Uncharacterized protein8.8e-3177.42Show/hide
Query:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL
        MP YVKFLKDILAKKRRMN  E +AL+QAT DVF NG  EKMTDP SF +PCSIGGMDLGRA  DLGASINLM LSIFKKLG+GEV PT + L
Subjt:  MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCATATGTCAAATTCTTAAAAGACATTTTGGCAAAGAAAAGAAGGATGAATGATTGCGAAACAATAGCTCTAACGCAGGCAACAAACGACGTCTTCAAAAATGG
GGTACCCGAGAAGATGACAGACCCTGGTAGCTTCACGGTACCGTGCTCAATAGGCGGGATGGATCTAGGTCGCGCGTTATACGATCTGGGAGCTAGCATTAACCTGATGC
TTCTCTCCATCTTCAAGAAATTAGGGATGGGAGAGGTACACCCAACTTTCTTGAGGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCATATGTCAAATTCTTAAAAGACATTTTGGCAAAGAAAAGAAGGATGAATGATTGCGAAACAATAGCTCTAACGCAGGCAACAAACGACGTCTTCAAAAATGG
GGTACCCGAGAAGATGACAGACCCTGGTAGCTTCACGGTACCGTGCTCAATAGGCGGGATGGATCTAGGTCGCGCGTTATACGATCTGGGAGCTAGCATTAACCTGATGC
TTCTCTCCATCTTCAAGAAATTAGGGATGGGAGAGGTACACCCAACTTTCTTGAGGCTCTAA
Protein sequenceShow/hide protein sequence
MPSYVKFLKDILAKKRRMNDCETIALTQATNDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRALYDLGASINLMLLSIFKKLGMGEVHPTFLRL