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PI0008910 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008910
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr07:11696850..11697230
RNA-Seq ExpressionPI0008910
SyntenyPI0008910
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041279.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-4576.98Show/hide
Query:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS
        MI+VI DL F+LMEECPP P +NASQ+V+DA+D WIKAN++AR+YILASMSDILSKKHE MVTARQIMDSL+EMFGQ SIQI  EAIKY+YNA MKEGQS
Subjt:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS

Query:  VREHVLDMMVQFNVAETNGTVIDEQS
        VREHVL+M+V FNVA+ NG V DE+S
Subjt:  VREHVLDMMVQFNVAETNGTVIDEQS

KAA0056413.1 gag/pol protein [Cucumis melo var. makuwa]7.9e-4576.19Show/hide
Query:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS
        MILVI DLRFVLMEECP  P +NASQ+V+DA+DRW KAN+KA +YILASMSDILSKKHE MVTARQI DSL+EMFGQPSIQI  EAIKYVYNA MK+GQS
Subjt:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS

Query:  VREHVLDMMVQFNVAETNGTVIDEQS
        V+EH+L+M+V FNV + NG V DE+S
Subjt:  VREHVLDMMVQFNVAETNGTVIDEQS

KAA0063887.1 gag/pol protein [Cucumis melo var. makuwa]7.1e-4677.78Show/hide
Query:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS
        MILVI DLRFVLMEECPP P +NASQ+V+DA+D W KAN+KA +Y+LAS+SDILSKKHE MVTARQIMDSL+EMFGQPSIQI  EAIKYVYNA MKEGQS
Subjt:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS

Query:  VREHVLDMMVQFNVAETNGTVIDEQS
        VREHVL M+V FNVAE N  + DE+S
Subjt:  VREHVLDMMVQFNVAETNGTVIDEQS

TYK15919.1 gag/pol protein [Cucumis melo var. makuwa]7.1e-4677.78Show/hide
Query:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS
        MILVI DLRFVLMEECPP P +NASQ+V+DA+D W KAN+KA +Y+LAS+SDILSKKHE MVTARQIMDSL+EMFGQPSIQI  EAIKYVYNA MKEGQS
Subjt:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS

Query:  VREHVLDMMVQFNVAETNGTVIDEQS
        VREHVL M+V FNVAE N  + DE+S
Subjt:  VREHVLDMMVQFNVAETNGTVIDEQS

TYK21841.1 gag/pol protein [Cucumis melo var. makuwa]7.1e-4677.6Show/hide
Query:  ILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQSV
        ILVI DLRF+LM+ECPP P +NASQ+V+D +DRW KAN+KARVYILASMSDILSKKHE MVTA QIMDSL+EMFGQ SIQI  +AIKYVYNA MKEGQSV
Subjt:  ILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQSV

Query:  REHVLDMMVQFNVAETNGTVIDEQS
        R+HV+DM+V FNVAE NG V DE+S
Subjt:  REHVLDMMVQFNVAETNGTVIDEQS

TrEMBL top hitse value%identityAlignment
A0A5A7TIU9 Gag/pol protein1.3e-4576.98Show/hide
Query:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS
        MI+VI DL F+LMEECPP P +NASQ+V+DA+D WIKAN++AR+YILASMSDILSKKHE MVTARQIMDSL+EMFGQ SIQI  EAIKY+YNA MKEGQS
Subjt:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS

Query:  VREHVLDMMVQFNVAETNGTVIDEQS
        VREHVL+M+V FNVA+ NG V DE+S
Subjt:  VREHVLDMMVQFNVAETNGTVIDEQS

A0A5A7VA67 Gag/pol protein3.5e-4677.78Show/hide
Query:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS
        MILVI DLRFVLMEECPP P +NASQ+V+DA+D W KAN+KA +Y+LAS+SDILSKKHE MVTARQIMDSL+EMFGQPSIQI  EAIKYVYNA MKEGQS
Subjt:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS

Query:  VREHVLDMMVQFNVAETNGTVIDEQS
        VREHVL M+V FNVAE N  + DE+S
Subjt:  VREHVLDMMVQFNVAETNGTVIDEQS

A0A5D3D0D9 Gag/pol protein3.5e-4677.78Show/hide
Query:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS
        MILVI DLRFVLMEECPP P +NASQ+V+DA+D W KAN+KA +Y+LAS+SDILSKKHE MVTARQIMDSL+EMFGQPSIQI  EAIKYVYNA MKEGQS
Subjt:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS

Query:  VREHVLDMMVQFNVAETNGTVIDEQS
        VREHVL M+V FNVAE N  + DE+S
Subjt:  VREHVLDMMVQFNVAETNGTVIDEQS

A0A5D3DDU7 Gag/pol protein3.5e-4677.6Show/hide
Query:  ILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQSV
        ILVI DLRF+LM+ECPP P +NASQ+V+D +DRW KAN+KARVYILASMSDILSKKHE MVTA QIMDSL+EMFGQ SIQI  +AIKYVYNA MKEGQSV
Subjt:  ILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQSV

Query:  REHVLDMMVQFNVAETNGTVIDEQS
        R+HV+DM+V FNVAE NG V DE+S
Subjt:  REHVLDMMVQFNVAETNGTVIDEQS

A0A5D3DZL3 Gag/pol protein3.8e-4576.19Show/hide
Query:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS
        MILVI DLRFVLMEECP  P +NASQ+V+DA+DRW KAN+KA +YILASMSDILSKKHE MVTARQI DSL+EMFGQPSIQI  EAIKYVYNA MK+GQS
Subjt:  MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQS

Query:  VREHVLDMMVQFNVAETNGTVIDEQS
        V+EH+L+M+V FNV + NG V DE+S
Subjt:  VREHVLDMMVQFNVAETNGTVIDEQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTTGTAATCGATGATTTACGCTTCGTCTTAATGGAGGAATGTCCTCCTTCCCCTGTTCGAAATGCATCCCAGACCGTTAGGGATGCACATGACCGCTGGATAAA
GGCCAATGAAAAGGCCCGAGTCTACATCTTGGCCAGTATGTCTGACATACTGAGCAAGAAACATGAGTCCATGGTCACTGCACGTCAGATCATGGACTCCCTCCAGGAGA
TGTTTGGACAACCGTCCATTCAAATCTGGCACGAGGCTATTAAATATGTTTATAATGCCTGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGTC
CAATTCAACGTGGCAGAAACAAACGGGACAGTCATTGACGAGCAAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCTTGTAATCGATGATTTACGCTTCGTCTTAATGGAGGAATGTCCTCCTTCCCCTGTTCGAAATGCATCCCAGACCGTTAGGGATGCACATGACCGCTGGATAAA
GGCCAATGAAAAGGCCCGAGTCTACATCTTGGCCAGTATGTCTGACATACTGAGCAAGAAACATGAGTCCATGGTCACTGCACGTCAGATCATGGACTCCCTCCAGGAGA
TGTTTGGACAACCGTCCATTCAAATCTGGCACGAGGCTATTAAATATGTTTATAATGCCTGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGTC
CAATTCAACGTGGCAGAAACAAACGGGACAGTCATTGACGAGCAAAGTTAG
Protein sequenceShow/hide protein sequence
MILVIDDLRFVLMEECPPSPVRNASQTVRDAHDRWIKANEKARVYILASMSDILSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNACMKEGQSVREHVLDMMV
QFNVAETNGTVIDEQS