CuGenDBv2

Gene ID	PI0008932
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Valyl-tRNA synthetase
Genome location	chr09:4473638..4474833
RNA-Seq Expression	PI0008932
Synteny	PI0008932
Gene Ontology terms	GO:0006438 - valyl-tRNA aminoacylation (biological process) GO:0106074 - aminoacyl-tRNA metabolism involved in translational fidelity (biological process) GO:0005737 - cytoplasm (cellular component) GO:0002161 - aminoacyl-tRNA editing activity (molecular function) GO:0004832 - valine-tRNA ligase activity (molecular function) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR002303 - Valine-tRNA ligase IPR009080 - Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPR013155 - Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605705.1 Valine--tRNA ligase, mitochondrial 1, partial [Cucurbita argyrosperma subsp. sororia]

5.5e-18

88.89

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MPYVTEELWQRLPYPKSSTR +SIMICDYPSVTEE TNE+VE EMD IVSAVKS
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

KAG7035615.1 Valine--tRNA ligase, mitochondrial 1 [Cucurbita argyrosperma subsp. argyrosperma]

5.5e-18

88.89

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MPYVTEELWQRLPYPKSSTR +SIMICDYPSVTEE TNE+VE EMD IVSAVKS
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

TYK00287.1 valine--tRNA ligase [Cucumis melo var. makuwa]

2.5e-18

88.89

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MPYVTEELWQRLPYPK+STR +SIMICDYPSVTEE TNEAVENEMD IVSAV+S
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

XP_008467213.1 PREDICTED: valine--tRNA ligase, mitochondrial 1 [Cucumis melo]

2.5e-18

88.89

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MPYVTEELWQRLPYPK+STR +SIMICDYPSVTEE TNEAVENEMD IVSAV+S
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

XP_022957954.1 valine--tRNA ligase, mitochondrial 1 isoform X2 [Cucurbita moschata]

5.5e-18

88.89

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MPYVTEELWQRLPYPKSSTR +SIMICDYPSVTEE TNE+VE EMD IVSAVKS
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPW4 Valyl-tRNA synthetase

6.0e-18

87.04

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MPYVTEELWQRLPYPK+STR +SIMICDYPSVTEE TNE VENEMD IVSAV+S
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

A0A1S3CT04 Valyl-tRNA synthetase

1.2e-18

88.89

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MPYVTEELWQRLPYPK+STR +SIMICDYPSVTEE TNEAVENEMD IVSAV+S
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

A0A5D3BM83 Valyl-tRNA synthetase

1.2e-18

88.89

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MPYVTEELWQRLPYPK+STR +SIMICDYPSVTEE TNEAVENEMD IVSAV+S
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

A0A6J1H1R1 Valyl-tRNA synthetase

2.7e-18

88.89

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MPYVTEELWQRLPYPKSSTR +SIMICDYPSVTEE TNE+VE EMD IVSAVKS
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

A0A6J1H3K8 Valyl-tRNA synthetase

2.7e-18

88.89

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MPYVTEELWQRLPYPKSSTR +SIMICDYPSVTEE TNE+VE EMD IVSAVKS
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

SwissProt top hits

e value

%identity

Alignment

P93736 Valine--tRNA ligase, mitochondrial 1

4.3e-13

64.15

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVK
        MP+VTEELWQRLP PK + R  SIMICDYPS  E  +NE VE+EMD +++ VK
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVK

Q5KWL3 Valine--tRNA ligase

2.1e-04

37.04

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MP++TEE+WQ LP+       +SI +  +P V  EL+NE    EM  +V  +++
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

Q5WYI0 Valine--tRNA ligase

8.6e-06

42.59

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MP++TEE+WQ+     +S    SIM+  YP V EE  N ++E E+D++ SA++S
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

Q5X728 Valine--tRNA ligase

3.9e-06

44.44

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MP++TEE+WQ+     +S    SIM+  YP V EE  N A+E E+D++ SA++S
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

Q5ZXL2 Valine--tRNA ligase

3.9e-06

44.44

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS
        MP++TEE+WQ+     +S    SIM+  YP V EE  N A+E E+D++ SA++S
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKS

Arabidopsis top hits

e value

%identity

Alignment

AT1G14610.1 valyl-tRNA synthetase / valine--tRNA ligase (VALRS)

3.0e-14

64.15

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVK
        MP+VTEELWQRLP PK + R  SIMICDYPS  E  +NE VE+EMD +++ VK
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVK

AT1G27160.1 valyl-tRNA synthetase / valine--tRNA ligase-related

6.8e-14

58.06

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Query:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKSHWQKKAVE
        MPY+TEELWQRLP  + S R  SIMICDYPS  E  TNE VE EMD +++ VK+    +A E
Subjt:  MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKSHWQKKAVE

Sequences

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CDS sequence

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ATGCCTTATGTTACAGAAGAACTATGGCAACGTCTTCCTTACCCAAAGAGTAGTACGAGGGCAGATTCAATAATGATATGCGACTATCCATCTGTGACAGAGGAATTGAC
TAATGAAGCTGTGGAGAATGAGATGGATTTTATAGTATCTGCTGTTAAATCACACTGGCAAAAGAAAGCTGTGGAAGATTCATATTAA

mRNA sequence

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ATGCCTTATGTTACAGAAGAACTATGGCAACGTCTTCCTTACCCAAAGAGTAGTACGAGGGCAGATTCAATAATGATATGCGACTATCCATCTGTGACAGAGGAATTGAC
TAATGAAGCTGTGGAGAATGAGATGGATTTTATAGTATCTGCTGTTAAATCACACTGGCAAAAGAAAGCTGTGGAAGATTCATATTAA

Protein sequence

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MPYVTEELWQRLPYPKSSTRADSIMICDYPSVTEELTNEAVENEMDFIVSAVKSHWQKKAVEDSY

PI0008932 (gene) of Melon (PI 482460) v1 genome