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PI0008973 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008973
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr03:20258591..20263702
RNA-Seq ExpressionPI0008973
SyntenyPI0008973
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]3.3e-7576.96Show/hide
Query:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKK
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK

Query:  GGKG
        GG+G
Subjt:  GGKG

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]3.3e-7576.96Show/hide
Query:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKK
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK

Query:  GGKG
        GG+G
Subjt:  GGKG

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]3.3e-7576.96Show/hide
Query:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKK
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK

Query:  GGKG
        GG+G
Subjt:  GGKG

KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]3.3e-7576.96Show/hide
Query:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA+QTVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL++MV F
Subjt:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKK
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK

Query:  GGKG
        GG+G
Subjt:  GGKG

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]3.3e-7576.96Show/hide
Query:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKK
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK

Query:  GGKG
        GG+G
Subjt:  GGKG

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.6e-7576.96Show/hide
Query:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKK
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK

Query:  GGKG
        GG+G
Subjt:  GGKG

A0A5A7TU93 Gag/pol protein1.6e-7576.96Show/hide
Query:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKK
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK

Query:  GGKG
        GG+G
Subjt:  GGKG

A0A5A7TWB9 Gag/pol protein1.6e-7576.96Show/hide
Query:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKK
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK

Query:  GGKG
        GG+G
Subjt:  GGKG

A0A5A7V6N0 Gag/pol protein1.6e-7576.96Show/hide
Query:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA+QTVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL++MV F
Subjt:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKK
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK

Query:  GGKG
        GG+G
Subjt:  GGKG

A0A5D3CPJ6 Gag/pol protein1.6e-7576.96Show/hide
Query:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKK
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKK

Query:  GGKG
        GG+G
Subjt:  GGKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATGTCCTCTTTCCCCTGTTCGAAATGCATCCCAGACCGTCAGGGATGCATATGACCGCTGGACAAAGGCCAATGAAAAGGCCCGAGTCTACATCTTGGCCAG
TATGTCTGACGTACTGAGCAAGAAACATGAGTCCATGGTCACTGCACGTCAGATCATGGACTCCCTCCAGGAGATGTTTGGACAACCGTCCATTCAAATCTGGCACGAGG
CTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGTCCAATTCAACGTGGCAGAAACGAACGGGGCGGTCATT
GACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTCCGAAGAGCTTCCTTCAATTCCGTAGCAATGCGGTTATGAACAAGATAGAGTATACCATGACTACCCTCCT
TAACGAGTTGCAGACTTTTCAGTCTCTTATGAAAAATAAGGGACAGAAAGAAGGAGAGGCAAATGTTGCCCATTCCAAGAGGTTTCAGAAGGGTTCATCCTCTGGAACCA
AGTCTGCACCTTCATCTTCTGGGACTAAGAAAATCCAGAAGAAGAAAGGAGGAAAGGGGAAAGGTCCATTAGGTCCCCTTTCTAGCTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAATGTCCTCTTTCCCCTGTTCGAAATGCATCCCAGACCGTCAGGGATGCATATGACCGCTGGACAAAGGCCAATGAAAAGGCCCGAGTCTACATCTTGGCCAG
TATGTCTGACGTACTGAGCAAGAAACATGAGTCCATGGTCACTGCACGTCAGATCATGGACTCCCTCCAGGAGATGTTTGGACAACCGTCCATTCAAATCTGGCACGAGG
CTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGTCCAATTCAACGTGGCAGAAACGAACGGGGCGGTCATT
GACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTCCGAAGAGCTTCCTTCAATTCCGTAGCAATGCGGTTATGAACAAGATAGAGTATACCATGACTACCCTCCT
TAACGAGTTGCAGACTTTTCAGTCTCTTATGAAAAATAAGGGACAGAAAGAAGGAGAGGCAAATGTTGCCCATTCCAAGAGGTTTCAGAAGGGTTCATCCTCTGGAACCA
AGTCTGCACCTTCATCTTCTGGGACTAAGAAAATCCAGAAGAAGAAAGGAGGAAAGGGGAAAGGTCCATTAGGTCCCCTTTCTAGCTCGTAA
Protein sequenceShow/hide protein sequence
MEECPLSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGAVI
DEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIQKKKGGKGKGPLGPLSSS