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PI0008994 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008994
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:23594940..23595104
RNA-Seq ExpressionPI0008994
SyntenyPI0008994
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]8.4e-1268.52Show/hide
Query:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ
        MTN  +I+D+DEGDSTYATTGGD+I YIE SNEWS+WRD  A  MF++W+LQ Q
Subjt:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ

KAA0067286.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]8.4e-1266.67Show/hide
Query:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ
        MTN ++ +D+DE DST+ATT  DDI YIE SNEWS+WRDD AEEMF++W+L NQ
Subjt:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ

TYK10899.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]8.4e-1266.67Show/hide
Query:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ
        MTN ++ +D+DE DST+ATT  DDI YIE SNEWS+WRDD AEEMF++W+L NQ
Subjt:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ

XP_031740445.1 uncharacterized protein LOC116403439 [Cucumis sativus]1.6e-1575.93Show/hide
Query:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ
        MTNV+ ++DVDEGDSTYAT GGDDIQ++ENSNEW++WRDD A EMFNEWQL+N+
Subjt:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ

XP_031741750.1 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like [Cucumis sativus]5.3e-1474.07Show/hide
Query:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ
        MTNV+ ++DVDEGDSTYAT GGDDIQ++ENSNEW++ RDD A EMFNEWQL N+
Subjt:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ

TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein9.1e-1266.67Show/hide
Query:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ
        MTN ++ +++DE DST+ATT  DDI YIE SNEWS+WRDD AEEMF EW+L+NQ
Subjt:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ

A0A5A7VLF4 Putative nuclease HARBI14.1e-1266.67Show/hide
Query:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ
        MTN ++ +D+DE DST+ATT  DDI YIE SNEWS+WRDD AEEMF++W+L NQ
Subjt:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ

A0A5D3CKZ1 Putative nuclease HARBI14.1e-1266.67Show/hide
Query:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ
        MTN ++ +D+DE DST+ATT  DDI YIE SNEWS+WRDD AEEMF++W+L NQ
Subjt:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ

A0A5D3D9Z3 Retrotransposon protein9.1e-1266.67Show/hide
Query:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ
        MTN ++ +++DE DST+ATT  DDI YIE SNEWS+WRDD AEEMF EW+L+NQ
Subjt:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ

A0A5D3DG22 Retrotransposon protein4.1e-1268.52Show/hide
Query:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ
        MTN  +I+D+DEGDSTYATTGGD+I YIE SNEWS+WRD  A  MF++W+LQ Q
Subjt:  MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACGTCAACGTAATAGAGGACGTCGACGAAGGTGACTCAACATATGCAACGACTGGAGGTGACGACATTCAGTACATTGAGAACTCGAACGAATGGAGTAAGTG
GAGGGACGATCAAGCAGAGGAGATGTTCAATGAATGGCAACTGCAGAATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAACGTCAACGTAATAGAGGACGTCGACGAAGGTGACTCAACATATGCAACGACTGGAGGTGACGACATTCAGTACATTGAGAACTCGAACGAATGGAGTAAGTG
GAGGGACGATCAAGCAGAGGAGATGTTCAATGAATGGCAACTGCAGAATCAGTAG
Protein sequenceShow/hide protein sequence
MTNVNVIEDVDEGDSTYATTGGDDIQYIENSNEWSKWRDDQAEEMFNEWQLQNQ