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PI0008999 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008999
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr04:14895970..14896245
RNA-Seq ExpressionPI0008999
SyntenyPI0008999
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060627.1 Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa]6.8e-1453.33Show/hide
Query:  MANTAP-IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSS
        MAN    +E  +TN S+P L+QLLNQ+++VKLD GN+LLWKTLAL I+K YK E HLTG++ CPPKFI     ES    +GT +    +S
Subjt:  MANTAP-IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSS

KAA0067279.1 uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]2.9e-1251.02Show/hide
Query:  MANTAPIENSSTNSSS---PLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFIL------ESAVESTEFGEGTVDTAASSS
        M N API  ++T ++S   PLL+Q+LNQ+ T+KLD GN+LLWKTLAL ILK YKL  HL G+  C PK I+      ES VE+   GE + +T++SS+
Subjt:  MANTAPIENSSTNSSS---PLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFIL------ESAVESTEFGEGTVDTAASSS

TYK02246.1 uncharacterized protein E5676_scaffold18G00450 [Cucumis melo var. makuwa]6.8e-1453.33Show/hide
Query:  MANTAP-IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSS
        MAN    +E  +TN S+P L+QLLNQ+++VKLD GN+LLWKTLAL I+K YK E HLTG++ CPPKFI     ES    +GT +    +S
Subjt:  MANTAP-IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSS

XP_016901223.1 PREDICTED: uncharacterized protein LOC107991202 [Cucumis melo]6.8e-1452.22Show/hide
Query:  MANTAP-IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSS
        MAN    +E+S+TN S+P L+QLLNQ+++VKLD  N+LLWKTLAL I+K YK E +LTG++ CPPKFI     ES    +GT +    +S
Subjt:  MANTAP-IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSS

XP_031745012.1 uncharacterized protein LOC116405217 [Cucumis sativus]1.7e-1264.52Show/hide
Query:  IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFIL
        I +S+TN S+P L+Q+LNQ+A+VKLD GN+LLW+TLAL ILK YKL+ HLT ++ CPPKFI+
Subjt:  IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFIL

TrEMBL top hitse value%identityAlignment
A0A1S4DZ26 uncharacterized protein LOC1079912023.3e-1452.22Show/hide
Query:  MANTAP-IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSS
        MAN    +E+S+TN S+P L+QLLNQ+++VKLD  N+LLWKTLAL I+K YK E +LTG++ CPPKFI     ES    +GT +    +S
Subjt:  MANTAP-IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSS

A0A5A7SIT7 Uncharacterized protein1.4e-1254.55Show/hide
Query:  APIENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDT--AASSSL
        AP   SS   S+P L+Q+LNQ+ATVKLD  N+LLWKTLAL ILK YKLE HLTG+  CP  F+L ++  +T   E   D    ASSS+
Subjt:  APIENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDT--AASSSL

A0A5A7V1E0 Reverse transcriptase, RNA-dependent DNA polymerase3.3e-1453.33Show/hide
Query:  MANTAP-IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSS
        MAN    +E  +TN S+P L+QLLNQ+++VKLD GN+LLWKTLAL I+K YK E HLTG++ CPPKFI     ES    +GT +    +S
Subjt:  MANTAP-IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSS

A0A5A7VPY0 Uncharacterized protein1.4e-1251.02Show/hide
Query:  MANTAPIENSSTNSSS---PLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFIL------ESAVESTEFGEGTVDTAASSS
        M N API  ++T ++S   PLL+Q+LNQ+ T+KLD GN+LLWKTLAL ILK YKL  HL G+  C PK I+      ES VE+   GE + +T++SS+
Subjt:  MANTAPIENSSTNSSS---PLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFIL------ESAVESTEFGEGTVDTAASSS

A0A5D3BVJ1 Uncharacterized protein3.3e-1453.33Show/hide
Query:  MANTAP-IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSS
        MAN    +E  +TN S+P L+QLLNQ+++VKLD GN+LLWKTLAL I+K YK E HLTG++ CPPKFI     ES    +GT +    +S
Subjt:  MANTAP-IENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACACAGCACCTATTGAAAATTCATCTACAAATTCCAGTAGTCCTCTGCTAAGCCAACTATTGAATCAGATCGCCACTGTAAAACTCGATTGTGGCAATTTTTT
GTTATGGAAGACTCTTGCGCTTTTGATTCTCAAGAGATACAAACTTGAAGTTCATCTTACTGGAGATGATCTTTGTCCTCCGAAATTTATTCTTGAATCAGCGGTTGAAT
CAACTGAATTTGGTGAAGGAACTGTTGATACAGCTGCATCCTCAAGTTTGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACACAGCACCTATTGAAAATTCATCTACAAATTCCAGTAGTCCTCTGCTAAGCCAACTATTGAATCAGATCGCCACTGTAAAACTCGATTGTGGCAATTTTTT
GTTATGGAAGACTCTTGCGCTTTTGATTCTCAAGAGATACAAACTTGAAGTTCATCTTACTGGAGATGATCTTTGTCCTCCGAAATTTATTCTTGAATCAGCGGTTGAAT
CAACTGAATTTGGTGAAGGAACTGTTGATACAGCTGCATCCTCAAGTTTGTTGTGA
Protein sequenceShow/hide protein sequence
MANTAPIENSSTNSSSPLLSQLLNQIATVKLDCGNFLLWKTLALLILKRYKLEVHLTGDDLCPPKFILESAVESTEFGEGTVDTAASSSLL