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PI0009015 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009015
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:11952249..11952536
RNA-Seq ExpressionPI0009015
SyntenyPI0009015
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047014.1 hypothetical protein E6C27_scaffold230G002160 [Cucumis melo var. makuwa]1.1e-1760.23Show/hide
Query:  RRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK
        RRG QVA +V  T   N+AQ S ++SSNPH++  QN+E+SM +RF  R+ DHFM   STVDKRF IERLKALGAMTFEG T+  +A K
Subjt:  RRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK

KAA0053236.1 uncharacterized protein E6C27_scaffold102G00210 [Cucumis melo var. makuwa]7.3e-1960Show/hide
Query:  MAVRERPRRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK
        MA +ER RRG QV T VQ T + ++ QESDEMS N HN   QN+ +SM +RFT ++ DHFM T ST+ KRF I+RLKAL AMTFEGTT+P +A+K
Subjt:  MAVRERPRRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK

KAA0054080.1 hypothetical protein E6C27_scaffold1371G00020 [Cucumis melo var. makuwa]1.3e-1863.53Show/hide
Query:  MQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK
        MQVA NVQ+ GS N+AQ  DEMSSNPH+T  QN+E+SM NRF  RVADH +   S V+KR  IER+KALGA  FEGT  PTN +K
Subjt:  MQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK

TYJ97632.1 gag/pol protein [Cucumis melo var. makuwa]5.6e-1960Show/hide
Query:  MAVRERPRRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK
        MA +ER RRG QV T VQ T + ++ QESDEMS N HN   QN+ +SM +RFT ++ DHFM T +T+ KRF IERLKAL AMTFEGTT+P +A+K
Subjt:  MAVRERPRRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK

TYK27664.1 uncharacterized protein E5676_scaffold93G00280 [Cucumis melo var. makuwa]3.3e-1964.71Show/hide
Query:  MQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK
        MQVA NVQ+ GS N+AQ  DEMSSNPH+T  QN+E+SM NRF  RVADH +   S V+KR  IER+KALGA TFEGT  PTN +K
Subjt:  MQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK

TrEMBL top hitse value%identityAlignment
A0A5A7TVM1 Uncharacterized protein5.1e-1860.23Show/hide
Query:  RRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK
        RRG QVA +V  T   N+AQ S ++SSNPH++  QN+E+SM +RF  R+ DHFM   STVDKRF IERLKALGAMTFEG T+  +A K
Subjt:  RRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK

A0A5A7UFQ1 Uncharacterized protein6.1e-1963.53Show/hide
Query:  MQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK
        MQVA NVQ+ GS N+AQ  DEMSSNPH+T  QN+E+SM NRF  RVADH +   S V+KR  IER+KALGA  FEGT  PTN +K
Subjt:  MQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK

A0A5A7UG91 Uncharacterized protein3.6e-1960Show/hide
Query:  MAVRERPRRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK
        MA +ER RRG QV T VQ T + ++ QESDEMS N HN   QN+ +SM +RFT ++ DHFM T ST+ KRF I+RLKAL AMTFEGTT+P +A+K
Subjt:  MAVRERPRRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK

A0A5D3BCS9 Gag/pol protein2.7e-1960Show/hide
Query:  MAVRERPRRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK
        MA +ER RRG QV T VQ T + ++ QESDEMS N HN   QN+ +SM +RFT ++ DHFM T +T+ KRF IERLKAL AMTFEGTT+P +A+K
Subjt:  MAVRERPRRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK

A0A5D3DVY7 Uncharacterized protein1.6e-1964.71Show/hide
Query:  MQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK
        MQVA NVQ+ GS N+AQ  DEMSSNPH+T  QN+E+SM NRF  RVADH +   S V+KR  IER+KALGA TFEGT  PTN +K
Subjt:  MQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTGCGAGAAAGGCCGAGGCGAGGCATGCAAGTGGCAACAAATGTTCAAACTACTGGGAGCACTAATAAAGCACAAGAATCAGATGAGATGTCCAGTAACCCACA
TAACACTACTGAGCAAAACATGGAGGACAGCATGCTTAATCGCTTTACTCATAGAGTAGCTGATCATTTTATGACTACACACTCCACTGTGGACAAGAGATTTAACATTG
AGAGATTGAAGGCGTTAGGAGCAATGACCTTTGAAGGAACCACTGACCCAACTAACGCGGAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGTGCGAGAAAGGCCGAGGCGAGGCATGCAAGTGGCAACAAATGTTCAAACTACTGGGAGCACTAATAAAGCACAAGAATCAGATGAGATGTCCAGTAACCCACA
TAACACTACTGAGCAAAACATGGAGGACAGCATGCTTAATCGCTTTACTCATAGAGTAGCTGATCATTTTATGACTACACACTCCACTGTGGACAAGAGATTTAACATTG
AGAGATTGAAGGCGTTAGGAGCAATGACCTTTGAAGGAACCACTGACCCAACTAACGCGGAGAAGTAG
Protein sequenceShow/hide protein sequence
MAVRERPRRGMQVATNVQTTGSTNKAQESDEMSSNPHNTTEQNMEDSMLNRFTHRVADHFMTTHSTVDKRFNIERLKALGAMTFEGTTDPTNAEK