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PI0009034 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009034
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationchr09:8664775..8665266
RNA-Seq ExpressionPI0009034
SyntenyPI0009034
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]4.2e-3863.4Show/hide
Query:  MSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQQ-SPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNS
        M+ + SFI   ++RN  +       N LPICI MQ+ SP  ++ +  N+GKTILGL+FQAVLALFI+SP SSPPLL HLFAAAVLISFAVSF  +FL N 
Subjt:  MSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQQ-SPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNS

Query:  FPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK
        FPR A LFEKIGAL AAIGVCI+AS LL+HQNFAWI W+A  FS++ F LSF+
Subjt:  FPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK

KAG6579132.1 hypothetical protein SDJN03_23580, partial [Cucurbita argyrosperma subsp. sororia]6.4e-3159.85Show/hide
Query:  SFCTPSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTARLFEKIGALFAAIGV
        SF TP +CLPI    +Q  +       N+GK I+GL+ QA+LA+FISSP+SSPPLL  LF A + ISF +SF  +FL N+FP+ ARLFEK+GALFAAIGV
Subjt:  SFCTPSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNSFPRTARLFEKIGALFAAIGV

Query:  CIIASFLLVHQNFAWICWVACAFSIIVFALSF
         IIASFLL+H+N+AWI  +AC FS+IVF LS+
Subjt:  CIIASFLLVHQNFAWICWVACAFSIIVFALSF

KAG6579136.1 hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2851.53Show/hide
Query:  MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAV
        M ST    S+DM+  SS          G S              + + PQA      NLGK + GL+FQAVLALFIS+PTS PPLLI+LFAAA+LIS A+
Subjt:  MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAV

Query:  SFGALFLNNSFPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK
        S  ALFL  +FPR A  F KIGA+ AA+G CI+AS LL HQNF+WI W+AC F+++ F LSFK
Subjt:  SFGALFLNNSFPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]4.2e-3860.98Show/hide
Query:  MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQ-QSPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFA
        M S+S Q S+DM+ + S I + ++RN  +       N LPICI MQ  SP  ++ +  N+G TILGL+FQAVLALFI+S TSSPPLL HLF AAVLISFA
Subjt:  MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQ-QSPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFA

Query:  VSFGALFLNNSFPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK
        VSF  +FL + FPR A LFEKIGAL AAIGVCI+AS LL+HQNFAWI W+AC FS++ F LSF+
Subjt:  VSFGALFLNNSFPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]4.4e-6484.76Show/hide
Query:  MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFISS-PTSSPPLLIHLFAAAVLISFA
        MASTSHQTSLDMSA SSFI T SQRNYGL   CTPSNCLP+ IRMQQSPQATA S Q LGK IL LSFQAVLALFISS PTS PPLLIH FAAAV ISFA
Subjt:  MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFISS-PTSSPPLLIHLFAAAVLISFA

Query:  VSFGALFLNNSFPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK
        VSF ALFL+NSFPRTA LFEK+GALF+A GVC IASFLLVHQNFAWICWVAC FSIIVFALSFK
Subjt:  VSFGALFLNNSFPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein2.0e-3860.98Show/hide
Query:  MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQ-QSPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFA
        M S+S Q S+DM+ + S I + ++RN  +       N LPICI MQ  SP  ++ +  N+G TILGL+FQAVLALFI+S TSSPPLL HLF AAVLISFA
Subjt:  MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQ-QSPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFA

Query:  VSFGALFLNNSFPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK
        VSF  +FL + FPR A LFEKIGAL AAIGVCI+AS LL+HQNFAWI W+AC FS++ F LSF+
Subjt:  VSFGALFLNNSFPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK

A0A0A0KJP2 Uncharacterized protein2.1e-6484.76Show/hide
Query:  MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFISS-PTSSPPLLIHLFAAAVLISFA
        MASTSHQTSLDMSA SSFI T SQRNYGL   CTPSNCLP+ IRMQQSPQATA S Q LGK IL LSFQAVLALFISS PTS PPLLIH FAAAV ISFA
Subjt:  MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFISS-PTSSPPLLIHLFAAAVLISFA

Query:  VSFGALFLNNSFPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK
        VSF ALFL+NSFPRTA LFEK+GALF+A GVC IASFLLVHQNFAWICWVAC FSIIVFALSFK
Subjt:  VSFGALFLNNSFPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK

A0A0A0KQ03 Uncharacterized protein1.7e-2448.52Show/hide
Query:  MAST-SHQTSLDMSAVSSFIPTNSQRNYGLSSFCT----PSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFIS-SPTSSPPLLIHLFAAAV
        MA T  H+ SLDM+ ++S I   + RN G+SS CT     S+CLPI I+MQ+       SPQ  G T L L+FQA++ LF+S +P+SS PL   LFAA +
Subjt:  MAST-SHQTSLDMSAVSSFIPTNSQRNYGLSSFCT----PSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFIS-SPTSSPPLLIHLFAAAV

Query:  LISFAVSFGALFLNNSFPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK
        L SF  S+  + L   FP+TA+L +  GALFAAIG CII S LL++ NF WICW+A    +  F +SFK
Subjt:  LISFAVSFGALFLNNSFPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter2.0e-3863.4Show/hide
Query:  MSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQQ-SPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNS
        M+ + SFI   ++RN  +       N LPICI MQ+ SP  ++ +  N+GKTILGL+FQAVLALFI+SP SSPPLL HLFAAAVLISFAVSF  +FL N 
Subjt:  MSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQQ-SPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNS

Query:  FPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK
        FPR A LFEKIGAL AAIGVCI+AS LL+HQNFAWI W+A  FS++ F LSF+
Subjt:  FPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK

A0A6J1CY58 uncharacterized protein LOC1110156581.1e-2864.29Show/hide
Query:  MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSF------CTPSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAV
        MAST  QTS+DM+A+SSFI   ++RN G+SSF       TPS+CLPICIRMQ+ P A   S Q+LGKTILGL+FQAVLALFIS P+S P L   LF AAV
Subjt:  MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSF------CTPSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAV

Query:  LISFAVSFGALFLNNSFPRTARLFEK
        LISFAVSF  LFL  ++PR A LFEK
Subjt:  LISFAVSFGALFLNNSFPRTARLFEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAACTTCACACCAAACCTCTTTAGATATGAGTGCAGTTTCTTCCTTTATCCCAACAAACAGCCAAAGAAACTATGGACTCAGCAGTTTCTGCACACCATCAAA
TTGTTTACCAATTTGCATTAGAATGCAACAAAGCCCTCAAGCAACAGCCATTAGCCCTCAAAATCTCGGCAAGACAATTCTTGGGCTTAGTTTTCAAGCAGTTTTAGCCT
TGTTCATTAGCTCACCAACTTCCTCTCCTCCACTTTTGATACACCTTTTTGCTGCTGCTGTTTTGATTAGCTTTGCTGTTTCATTTGGTGCTCTTTTCCTGAATAACTCC
TTCCCGAGAACCGCCCGTTTGTTTGAGAAGATTGGTGCGCTTTTCGCTGCAATTGGTGTGTGTATCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTG
TTGGGTGGCATGTGCCTTCTCCATCATTGTTTTTGCTCTATCATTTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAACTTCACACCAAACCTCTTTAGATATGAGTGCAGTTTCTTCCTTTATCCCAACAAACAGCCAAAGAAACTATGGACTCAGCAGTTTCTGCACACCATCAAA
TTGTTTACCAATTTGCATTAGAATGCAACAAAGCCCTCAAGCAACAGCCATTAGCCCTCAAAATCTCGGCAAGACAATTCTTGGGCTTAGTTTTCAAGCAGTTTTAGCCT
TGTTCATTAGCTCACCAACTTCCTCTCCTCCACTTTTGATACACCTTTTTGCTGCTGCTGTTTTGATTAGCTTTGCTGTTTCATTTGGTGCTCTTTTCCTGAATAACTCC
TTCCCGAGAACCGCCCGTTTGTTTGAGAAGATTGGTGCGCTTTTCGCTGCAATTGGTGTGTGTATCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTG
TTGGGTGGCATGTGCCTTCTCCATCATTGTTTTTGCTCTATCATTTAAGTGA
Protein sequenceShow/hide protein sequence
MASTSHQTSLDMSAVSSFIPTNSQRNYGLSSFCTPSNCLPICIRMQQSPQATAISPQNLGKTILGLSFQAVLALFISSPTSSPPLLIHLFAAAVLISFAVSFGALFLNNS
FPRTARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWVACAFSIIVFALSFK