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PI0009036 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009036
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr07:11521404..11521784
RNA-Seq ExpressionPI0009036
SyntenyPI0009036
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]2.7e-3773.6Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+R SSS N APSPMSADQYAMDLGFT VTRS++R SGI I  PTESSTPPRPSANL+RP G + QM+PPASP SN +SSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPKKRFIPRPEIKIIFK
        PTTYSQAV P KRF+PRP+IK  F+
Subjt:  PTTYSQAVAPKKRFIPRPEIKIIFK
KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]6.5e-3976Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RP SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPTESSTPPRPS NL+RPS G+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPKKRFIPRPEIKIIFK
        PTTYSQAV P KRF+PRPEIK  F+
Subjt:  PTTYSQAVAPKKRFIPRPEIKIIFK
KAA0053156.1 hypothetical protein E6C27_scaffold1248G00100 [Cucumis melo var. makuwa]2.1e-3775.2Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N APSPMS DQYAM LGFTT+T+SK+RSSGIRI SPTES TPPRP ANL+RPSG + QMR P SPLSN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPKKRFIPRPEIKIIFK
        PTTYSQAV P KRF+PR EIK  F+
Subjt:  PTTYSQAVAPKKRFIPRPEIKIIFK
KAA0056175.1 hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]5.5e-3873.6Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+ PSSS N A SPM++DQYAMDL FTTVTRS++RSS IR  SPTESSTPPRP ANL+RPSGG+ QMRPP SP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPKKRFIPRPEIKIIFK
        PTTYSQAV P KRF+PRP+IK  F+
Subjt:  PTTYSQAVAPKKRFIPRPEIKIIFK
TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]3.4e-4076.8Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTPPRP ANL+RPSG + QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPKKRFIPRPEIKIIFK
        PTTYSQAV P KRF+PRP+IK  F+
Subjt:  PTTYSQAVAPKKRFIPRPEIKIIFK
TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein3.1e-3976Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RP SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPTESSTPPRPS NL+RPS G+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPKKRFIPRPEIKIIFK
        PTTYSQAV P KRF+PRPEIK  F+
Subjt:  PTTYSQAVAPKKRFIPRPEIKIIFK
A0A5A7UFZ9 Uncharacterized protein1.0e-3775.2Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N APSPMS DQYAM LGFTT+T+SK+RSSGIRI SPTES TPPRP ANL+RPSG + QMR P SPLSN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPKKRFIPRPEIKIIFK
        PTTYSQAV P KRF+PR EIK  F+
Subjt:  PTTYSQAVAPKKRFIPRPEIKIIFK
A0A5A7URC1 Uncharacterized protein2.7e-3873.6Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+ PSSS N A SPM++DQYAMDL FTTVTRS++RSS IR  SPTESSTPPRP ANL+RPSGG+ QMRPP SP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPKKRFIPRPEIKIIFK
        PTTYSQAV P KRF+PRP+IK  F+
Subjt:  PTTYSQAVAPKKRFIPRPEIKIIFK
A0A5D3CKX1 Uncharacterized protein1.7e-4076.8Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTPPRP ANL+RPSG + QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPKKRFIPRPEIKIIFK
        PTTYSQAV P KRF+PRP+IK  F+
Subjt:  PTTYSQAVAPKKRFIPRPEIKIIFK
A0A5D3E4J4 Uncharacterized protein1.3e-3773.6Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+R SSS N APSPMSADQYAMDLGFT VTRS++R SGI I  PTESSTPPRPSANL+RP G + QM+PPASP SN +SSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPKKRFIPRPEIKIIFK
        PTTYSQAV P KRF+PRP+IK  F+
Subjt:  PTTYSQAVAPKKRFIPRPEIKIIFK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTAGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAAAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAATTATTTTCAAAAGCAAGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTAGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAAAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAATTATTTTCAAAAGCAAGTGGTAA
Protein sequenceShow/hide protein sequence
MSSVRGRGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPKK
RFIPRPEIKIIFKSKW