; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009040 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009040
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr11:16291963..16293072
RNA-Seq ExpressionPI0009040
SyntenyPI0009040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]1.0e-3938.85Show/hide
Query:  LSEQVERHPVKVKALE----PEKNLEVIAEELEEELEAMSPLDNR---PPPRKPREVAGPRGQK-----KTGRSGPEERPSDGDTMSKVPSINSFIKVEK
        L  +V+   VK  A E     EK  +  ++E E+ELE +SPL++R     P+K R + G    K     KT +   E + S+ + +     +     +EK
Subjt:  LSEQVERHPVKVKALE----PEKNLEVIAEELEEELEAMSPLDNR---PPPRKPREVAGPRGQK-----KTGRSGPEERPSDGDTMSKVPSINSFIKVEK

Query:  GLFPFNGQLLDFLFAPIQVFGWKSFFKGHTKVRLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDL-PNDVEIPRQIYVDSPTKMMARKALEVI
        G+FPF GQL  FL +PI+   WK FF+G T +R  V+  FY   +N E     + GK V+F  + +N LY L    VE P       P+ +  + ALE +
Subjt:  GLFPFNGQLLDFLFAPIQVFGWKSFFKGHTKVRLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDL-PNDVEIPRQIYVDSPTKMMARKALEVI

Query:  AWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWM
        AWPG  W++TP  KYQL+PH L T ASVWL  FIKK + PTRHD+ I+LE  MLLYCI+ +  +N+  +I   I +W+
Subjt:  AWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWM

KAA0049609.1 transposase [Cucumis melo var. makuwa]3.5e-3252.32Show/hide
Query:  GEEFRVQISGKTVSFSAEAINALYDLPNDV-EIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFFIKKKIFPTRHDSI
        G E    +  + V F+ E IN LYDLPND+   P Q  +    +  A+K +++I WP A    TPT + QL+PHQLT EA+VWL FFIKKKIFPT HDS 
Subjt:  GEEFRVQISGKTVSFSAEAINALYDLPNDV-EIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFFIKKKIFPTRHDSI

Query:  INLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLK
        I  E A++LYCI AKK  NLG ++  + LSWMR PK A PFP+T++ LCLK
Subjt:  INLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLK

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]2.9e-3135.61Show/hide
Query:  EEELEAMSPLDNRPPPRKPR--------EVAGPRGQKKTGRSGPEERPSDGDTMSKVPSINSFIKVEKGLFPFNGQLLDFLFAPIQVFGWKSFFKGHTKV
        EE+   +SPL+     R+PR        + A  R +K+  +   E +  + D +S          VEKG F F  QL  FL  PI+  GW+ F +G   +
Subjt:  EEELEAMSPLDNRPPPRKPR--------EVAGPRGQKKTGRSGPEERPSDGDTMSKVPSINSFIKVEKGLFPFNGQLLDFLFAPIQVFGWKSFFKGHTKV

Query:  RLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDLPNDVEIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFF
        R GVV+ FY  K++ E+    +  +               P+D ++              ++ALE +AW    W+VT   KY+L+ H LTTEASVWL  F
Subjt:  RLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDLPNDVEIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFF

Query:  IKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLK
        IKKK+ PTRHD+ I+ E  MLLYCI+ +  V++  +I   I +W++ P+GA PFP  IE LCL+
Subjt:  IKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLK

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]3.2e-3848.63Show/hide
Query:  KVRLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDLPNDVEIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWL
        K+R+ VV KFY  K N  +  + I  +   F+ E IN LY+ PND E   Q  V   TK +A++AL+V+AWPG   EV P   +YQLYPH LTT+A+VW+
Subjt:  KVRLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDLPNDVEIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWL

Query:  FFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLKVVPFLSAIQTIPIPGR
         FF K KIFPT +DS I+++  ++LYCI+ KK +NL  +I  +IL+WM  PK AMPFPS +E LCLK +P L       IP R
Subjt:  FFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLKVVPFLSAIQTIPIPGR

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]1.6e-3248.26Show/hide
Query:  KGHTKVRLGVVEKFYAAKLN-GEEFRVQISGKTVSFSAEAINALYDLPNDV-EIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTE
        +G  +  +G  E     K+  G E    +  + V F+ E IN LYDLPND+   P Q  +    +  A+K +++I WP A    TPT + QL+PHQLT E
Subjt:  KGHTKVRLGVVEKFYAAKLN-GEEFRVQISGKTVSFSAEAINALYDLPNDV-EIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTE

Query:  ASVWLFFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLK
        A+VWL FFIKKKIFPT HDS I  E A++LYCI AKK  NLG ++  + LSWMR PK A PFP+T++ LCLK
Subjt:  ASVWLFFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLK

TrEMBL top hitse value%identityAlignment
A0A5A7TZE0 Protein MNN4-like4.9e-4038.85Show/hide
Query:  LSEQVERHPVKVKALE----PEKNLEVIAEELEEELEAMSPLDNR---PPPRKPREVAGPRGQK-----KTGRSGPEERPSDGDTMSKVPSINSFIKVEK
        L  +V+   VK  A E     EK  +  ++E E+ELE +SPL++R     P+K R + G    K     KT +   E + S+ + +     +     +EK
Subjt:  LSEQVERHPVKVKALE----PEKNLEVIAEELEEELEAMSPLDNR---PPPRKPREVAGPRGQK-----KTGRSGPEERPSDGDTMSKVPSINSFIKVEK

Query:  GLFPFNGQLLDFLFAPIQVFGWKSFFKGHTKVRLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDL-PNDVEIPRQIYVDSPTKMMARKALEVI
        G+FPF GQL  FL +PI+   WK FF+G T +R  V+  FY   +N E     + GK V+F  + +N LY L    VE P       P+ +  + ALE +
Subjt:  GLFPFNGQLLDFLFAPIQVFGWKSFFKGHTKVRLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDL-PNDVEIPRQIYVDSPTKMMARKALEVI

Query:  AWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWM
        AWPG  W++TP  KYQL+PH L T ASVWL  FIKK + PTRHD+ I+LE  MLLYCI+ +  +N+  +I   I +W+
Subjt:  AWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWM

A0A5A7U806 Transposase1.7e-3252.32Show/hide
Query:  GEEFRVQISGKTVSFSAEAINALYDLPNDV-EIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFFIKKKIFPTRHDSI
        G E    +  + V F+ E IN LYDLPND+   P Q  +    +  A+K +++I WP A    TPT + QL+PHQLT EA+VWL FFIKKKIFPT HDS 
Subjt:  GEEFRVQISGKTVSFSAEAINALYDLPNDV-EIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFFIKKKIFPTRHDSI

Query:  INLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLK
        I  E A++LYCI AKK  NLG ++  + LSWMR PK A PFP+T++ LCLK
Subjt:  INLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLK

A0A5A7V6M5 Gag/pol protein1.6e-3848.63Show/hide
Query:  KVRLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDLPNDVEIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWL
        K+R+ VV KFY  K N  +  + I  +   F+ E IN LY+ PND E   Q  V   TK +A++AL+V+AWPG   EV P   +YQLYPH LTT+A+VW+
Subjt:  KVRLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDLPNDVEIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWL

Query:  FFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLKVVPFLSAIQTIPIPGR
         FF K KIFPT +DS I+++  ++LYCI+ KK +NL  +I  +IL+WM  PK AMPFPS +E LCLK +P L       IP R
Subjt:  FFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLKVVPFLSAIQTIPIPGR

A0A5D3CVL7 Uncharacterized protein7.5e-3348.26Show/hide
Query:  KGHTKVRLGVVEKFYAAKLN-GEEFRVQISGKTVSFSAEAINALYDLPNDV-EIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTE
        +G  +  +G  E     K+  G E    +  + V F+ E IN LYDLPND+   P Q  +    +  A+K +++I WP A    TPT + QL+PHQLT E
Subjt:  KGHTKVRLGVVEKFYAAKLN-GEEFRVQISGKTVSFSAEAINALYDLPNDV-EIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTE

Query:  ASVWLFFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLK
        A+VWL FFIKKKIFPT HDS I  E A++LYCI AKK  NLG ++  + LSWMR PK A PFP+T++ LCLK
Subjt:  ASVWLFFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLK

A0A5D3DVQ6 Uncharacterized protein1.4e-3135.61Show/hide
Query:  EEELEAMSPLDNRPPPRKPR--------EVAGPRGQKKTGRSGPEERPSDGDTMSKVPSINSFIKVEKGLFPFNGQLLDFLFAPIQVFGWKSFFKGHTKV
        EE+   +SPL+     R+PR        + A  R +K+  +   E +  + D +S          VEKG F F  QL  FL  PI+  GW+ F +G   +
Subjt:  EEELEAMSPLDNRPPPRKPR--------EVAGPRGQKKTGRSGPEERPSDGDTMSKVPSINSFIKVEKGLFPFNGQLLDFLFAPIQVFGWKSFFKGHTKV

Query:  RLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDLPNDVEIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFF
        R GVV+ FY  K++ E+    +  +               P+D ++              ++ALE +AW    W+VT   KY+L+ H LTTEASVWL  F
Subjt:  RLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDLPNDVEIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFF

Query:  IKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLK
        IKKK+ PTRHD+ I+ E  MLLYCI+ +  V++  +I   I +W++ P+GA PFP  IE LCL+
Subjt:  IKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGCAGACCTGAGCGAGCAAGTGGAGAGGCACCCTGTGAAAGTTAAGGCGCTGGAGCCTGAGAAGAACCTCGAGGTGATTGCAGAAGAACTCGAGGAGGAGTTGGA
GGCGATGAGCCCACTTGATAACAGGCCACCACCAAGAAAACCAAGGGAGGTCGCAGGACCAAGGGGACAGAAAAAAACTGGGCGTTCTGGACCTGAAGAGCGCCCATCAG
ACGGCGACACCATGAGCAAAGTACCCTCCATCAACTCCTTCATCAAGGTTGAGAAAGGGCTGTTTCCGTTCAATGGTCAACTCCTAGATTTCCTCTTCGCGCCAATCCAG
GTGTTCGGATGGAAGTCATTCTTCAAGGGGCACACCAAAGTAAGATTAGGGGTGGTGGAAAAGTTTTATGCGGCTAAGCTCAATGGTGAAGAGTTTAGAGTGCAAATTAG
TGGAAAAACAGTGAGTTTCAGCGCAGAGGCCATCAACGCGTTGTATGATTTGCCCAATGATGTTGAAATACCAAGGCAAATATACGTAGACAGTCCTACGAAGATGATGG
CCCGTAAAGCGCTGGAAGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACGGGGAAGTATCAGTTGTATCCACATCAGCTAACCACTGAGGCGAGCGTGTGG
TTGTTTTTTTTTATCAAGAAGAAGATCTTCCCAACGCGCCATGATAGTATCATCAACTTAGAGTCAGCGATGCTACTCTATTGTATCTTGGCGAAGAAGCGCGTCAACCT
TGGCAATCTTATAGCCACATCCATTCTGTCTTGGATGCGAGCTCCCAAAGGCGCCATGCCCTTCCCTTCAACCATCGAAGCCCTTTGCCTTAAAGTTGTGCCATTCTTAT
CCGCCATCCAAACAATTCCAATACCAGGCAGGCTGTGTAATCAAATGGCTTTAAACCGCATGATTACTTTCCATGGACACAAGAAATGGAAAGGCGAGCAAAGACATTGG
GCGACACACCTGAAGGAATGGCCCAAGCAGAACGCAAAAGGAAATCCCCAGTCGTCGCATCAACCCCCCCACCTAAAGCCAAAAAAGCAAAGGTTGATATGGCGAAGCAG
CCTCCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGCAGACCTGAGCGAGCAAGTGGAGAGGCACCCTGTGAAAGTTAAGGCGCTGGAGCCTGAGAAGAACCTCGAGGTGATTGCAGAAGAACTCGAGGAGGAGTTGGA
GGCGATGAGCCCACTTGATAACAGGCCACCACCAAGAAAACCAAGGGAGGTCGCAGGACCAAGGGGACAGAAAAAAACTGGGCGTTCTGGACCTGAAGAGCGCCCATCAG
ACGGCGACACCATGAGCAAAGTACCCTCCATCAACTCCTTCATCAAGGTTGAGAAAGGGCTGTTTCCGTTCAATGGTCAACTCCTAGATTTCCTCTTCGCGCCAATCCAG
GTGTTCGGATGGAAGTCATTCTTCAAGGGGCACACCAAAGTAAGATTAGGGGTGGTGGAAAAGTTTTATGCGGCTAAGCTCAATGGTGAAGAGTTTAGAGTGCAAATTAG
TGGAAAAACAGTGAGTTTCAGCGCAGAGGCCATCAACGCGTTGTATGATTTGCCCAATGATGTTGAAATACCAAGGCAAATATACGTAGACAGTCCTACGAAGATGATGG
CCCGTAAAGCGCTGGAAGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACGGGGAAGTATCAGTTGTATCCACATCAGCTAACCACTGAGGCGAGCGTGTGG
TTGTTTTTTTTTATCAAGAAGAAGATCTTCCCAACGCGCCATGATAGTATCATCAACTTAGAGTCAGCGATGCTACTCTATTGTATCTTGGCGAAGAAGCGCGTCAACCT
TGGCAATCTTATAGCCACATCCATTCTGTCTTGGATGCGAGCTCCCAAAGGCGCCATGCCCTTCCCTTCAACCATCGAAGCCCTTTGCCTTAAAGTTGTGCCATTCTTAT
CCGCCATCCAAACAATTCCAATACCAGGCAGGCTGTGTAATCAAATGGCTTTAAACCGCATGATTACTTTCCATGGACACAAGAAATGGAAAGGCGAGCAAAGACATTGG
GCGACACACCTGAAGGAATGGCCCAAGCAGAACGCAAAAGGAAATCCCCAGTCGTCGCATCAACCCCCCCACCTAAAGCCAAAAAAGCAAAGGTTGATATGGCGAAGCAG
CCTCCACTGA
Protein sequenceShow/hide protein sequence
MLADLSEQVERHPVKVKALEPEKNLEVIAEELEEELEAMSPLDNRPPPRKPREVAGPRGQKKTGRSGPEERPSDGDTMSKVPSINSFIKVEKGLFPFNGQLLDFLFAPIQ
VFGWKSFFKGHTKVRLGVVEKFYAAKLNGEEFRVQISGKTVSFSAEAINALYDLPNDVEIPRQIYVDSPTKMMARKALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVW
LFFFIKKKIFPTRHDSIINLESAMLLYCILAKKRVNLGNLIATSILSWMRAPKGAMPFPSTIEALCLKVVPFLSAIQTIPIPGRLCNQMALNRMITFHGHKKWKGEQRHW
ATHLKEWPKQNAKGNPQSSHQPPHLKPKKQRLIWRSSLH