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PI0009054 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009054
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:16855443..16856794
RNA-Seq ExpressionPI0009054
SyntenyPI0009054
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057846.1 uncharacterized protein E6C27_scaffold274G001330 [Cucumis melo var. makuwa]1.2e-1154.05Show/hide
Query:  AEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGI
        AEEDLDHLFW+C ++  VW SFLQEFGVSFA  RSVR             +    FYGL  CA L G FG RG+
Subjt:  AEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGI

KAA0065741.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucumis melo var. makuwa]4.7e-0839.81Show/hide
Query:  MLGQMAEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRS
        ML   AEE  DHLFW+C ++RAVW SF QEF V+F   RSVR                              I+G R  +D  FRG ER  S++W L R 
Subjt:  MLGQMAEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRS

Query:  HVS
        H S
Subjt:  HVS

KAA0067918.1 hypothetical protein E6C27_scaffold138G00850 [Cucumis melo var. makuwa]6.1e-0874.42Show/hide
Query:  MLGQMAEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRV
        ML Q AEEDLDHLF +C ++RAVW SFLQ+ GVSFAG RSVRV
Subjt:  MLGQMAEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRV

TYK19563.1 uncharacterized protein E5676_scaffold416G00660 [Cucumis melo var. makuwa]6.6e-1047Show/hide
Query:  CSFLQ----EFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRSHVSPWASVSKNFWNYSIGNI
        CSF +    EF VS AG R VR +           E     +    CA ++ I+G R   DRVFRGK+R  SEI  LVR HVS W SVSK F NYS+GNI
Subjt:  CSFLQ----EFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRSHVSPWASVSKNFWNYSIGNI

XP_016900613.1 PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo]7.8e-1137.72Show/hide
Query:  EDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRSHVSPWAS
        EDLDHL  +   +  +W +FLQ FG+ +A  R VR +      ++   E     +    CA L+ ++       RVF G ERG  EIW ++R HVS W S
Subjt:  EDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRSHVSPWAS

Query:  VSKNFWNYSIGNIL
        +SK F NY +  IL
Subjt:  VSKNFWNYSIGNIL

TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909763.8e-1137.72Show/hide
Query:  EDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRSHVSPWAS
        EDLDHL  +   +  +W +FLQ FG+ +A  R VR +      ++   E     +    CA L+ ++       RVF G ERG  EIW ++R HVS W S
Subjt:  EDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRSHVSPWAS

Query:  VSKNFWNYSIGNIL
        +SK F NY +  IL
Subjt:  VSKNFWNYSIGNIL

A0A5A7UUK8 Uncharacterized protein5.8e-1254.05Show/hide
Query:  AEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGI
        AEEDLDHLFW+C ++  VW SFLQEFGVSFA  RSVR             +    FYGL  CA L G FG RG+
Subjt:  AEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGI

A0A5A7VJ83 DNA-directed RNA polymerases I and III subunit RPAC12.3e-0839.81Show/hide
Query:  MLGQMAEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRS
        ML   AEE  DHLFW+C ++RAVW SF QEF V+F   RSVR                              I+G R  +D  FRG ER  S++W L R 
Subjt:  MLGQMAEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRS

Query:  HVS
        H S
Subjt:  HVS

A0A5A7VJE4 zf-RVT domain-containing protein3.0e-0874.42Show/hide
Query:  MLGQMAEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRV
        ML Q AEEDLDHLF +C ++RAVW SFLQ+ GVSFAG RSVRV
Subjt:  MLGQMAEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRV

A0A5D3D7T2 Uncharacterized protein3.2e-1047Show/hide
Query:  CSFLQ----EFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRSHVSPWASVSKNFWNYSIGNI
        CSF +    EF VS AG R VR +           E     +    CA ++ I+G R   DRVFRGK+R  SEI  LVR HVS W SVSK F NYS+GNI
Subjt:  CSFLQ----EFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRSHVSPWASVSKNFWNYSIGNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGGTCAGATGGCGGAGGAAGATCTTGATCATCTCTTTTGGAATTGCCCGTTTTCGAGGGCCGTGTGGTGCTCTTTCTTGCAAGAGTTCGGTGTTAGTTTTGCTGG
TTTGAGGAGTGTTAGAGTGGTACGATCAAGGAGTTCCTTCTCCATTCGCCTTTCAGAGCTAAATGATGCTTTTTATGGCTTGCCGGAGTGTGCTCGGTTATTTGGGATAT
TTGGGGTGAGAGGAATATTCGATAGGGTGTTTAGGGGTAAAGAGAGGGGGCATAGTGAGATTTGGTTTTTGGTTAGATCTCACGTGTCTCCTTGGGCTTCGGTTTCGAAG
AACTTTTGGAACTATTCTATTGGCAACATTTTACAAGTTGGTGCCCCTTCTTTTAATAGAGTGGTTTTGTGGGGCTGGCTTTTTTCTTTTGATTCTGCTGCTCATCTTTT
CAGGTCTGCCCTGTTTGCAGTGCTGAAGTCTCCACAGCTACCGAAAGCAGTTAGTCGTAGCATGTGGTATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAGGTCAGATGGCGGAGGAAGATCTTGATCATCTCTTTTGGAATTGCCCGTTTTCGAGGGCCGTGTGGTGCTCTTTCTTGCAAGAGTTCGGTGTTAGTTTTGCTGG
TTTGAGGAGTGTTAGAGTGGTACGATCAAGGAGTTCCTTCTCCATTCGCCTTTCAGAGCTAAATGATGCTTTTTATGGCTTGCCGGAGTGTGCTCGGTTATTTGGGATAT
TTGGGGTGAGAGGAATATTCGATAGGGTGTTTAGGGGTAAAGAGAGGGGGCATAGTGAGATTTGGTTTTTGGTTAGATCTCACGTGTCTCCTTGGGCTTCGGTTTCGAAG
AACTTTTGGAACTATTCTATTGGCAACATTTTACAAGTTGGTGCCCCTTCTTTTAATAGAGTGGTTTTGTGGGGCTGGCTTTTTTCTTTTGATTCTGCTGCTCATCTTTT
CAGGTCTGCCCTGTTTGCAGTGCTGAAGTCTCCACAGCTACCGAAAGCAGTTAGTCGTAGCATGTGGTATTATTGA
Protein sequenceShow/hide protein sequence
MLGQMAEEDLDHLFWNCPFSRAVWCSFLQEFGVSFAGLRSVRVVRSRSSFSIRLSELNDAFYGLPECARLFGIFGVRGIFDRVFRGKERGHSEIWFLVRSHVSPWASVSK
NFWNYSIGNILQVGAPSFNRVVLWGWLFSFDSAAHLFRSALFAVLKSPQLPKAVSRSMWYY