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PI0009083 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009083
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:10970451..10971047
RNA-Seq ExpressionPI0009083
SyntenyPI0009083
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]2.2e-8976.92Show/hide
Query:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW
        MVYFTERFLSG RHL IL+D+NQPR+DG SL+VE    G+FAD WP LDN+S+LP+LSVE+PLS+GK+AWV+QSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY   L+  VTASLYTYDRN DVVRAFCEAWCPSTNTLHTMAGE+ ISLWDLWSF GLPI+G+FY
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]3.6e-9278.97Show/hide
Query:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW
        MVYFTERFLSG RHL IL+D+NQPR+DG SL+VE    G+FAD WP LDN+S+LP+LSVE+PLS+GK+AWV+QSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY  RL+GAVTASLYTYDRN DVVRAFCEAWCPSTNTLHTMAGE+ ISLWDLWSFGGLPI+G+FY
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]5.1e-9178.46Show/hide
Query:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW
        MVYFTERFLSG RHL IL+D+NQPR+DG SL+VE    G+FAD WP LDN+S+LP+LSVEIPLS+GK+AW++QSSIH EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY
        G VTKVP EFCFTDCYWEWLE VVGR+  +LY  RL+GAVTASLYTYDRN DVVRAFCEAWCPSTNTLHTMAGE+ ISLWDLWSFGGLPI+G+FY
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]2.2e-8976.92Show/hide
Query:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW
        MVYFTERFLSG RHL IL+D+NQPR+DG SL+VE    G+FAD WP LDN+S+LP+LSVE+PLS+GK+AWV+QSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY   L+  VTASLYTYDRN DVVRAFCEAWCPSTNTLHTMAGE+ ISLWDLWSF GLPI+G+FY
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]5.3e-8875.25Show/hide
Query:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW
        MVYFTERFLSG RHL IL+D+NQPR+DG SL+VE    G+FA+ WP LDN+S+LP+LSVE+ LS+GK+AWV+QSSIH EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFYAFL
        G VTKVPGEFCF DCYWEWLE VVGR+  +LY  RL+GAVTASLYTYD N DVVRAFCEAWCPSTNTLHTMAGE+ ISLWDLWSFGGLPI+G +Y+ +
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFYAFL

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein1.0e-8976.92Show/hide
Query:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW
        MVYFTERFLSG RHL IL+D+NQPR+DG SL+VE    G+FAD WP LDN+S+LP+LSVE+PLS+GK+AWV+QSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY   L+  VTASLYTYDRN DVVRAFCEAWCPSTNTLHTMAGE+ ISLWDLWSF GLPI+G+FY
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY

A0A5A7TX42 Uncharacterized protein1.7e-9278.97Show/hide
Query:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW
        MVYFTERFLSG RHL IL+D+NQPR+DG SL+VE    G+FAD WP LDN+S+LP+LSVE+PLS+GK+AWV+QSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY  RL+GAVTASLYTYDRN DVVRAFCEAWCPSTNTLHTMAGE+ ISLWDLWSFGGLPI+G+FY
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY

A0A5A7U8X8 PMD domain-containing protein2.6e-8875.25Show/hide
Query:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW
        MVYFTERFLSG RHL IL+D+NQPR+DG SL+VE    G+FA+ WP LDN+S+LP+LSVE+ LS+GK+AWV+QSSIH EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFYAFL
        G VTKVPGEFCF DCYWEWLE VVGR+  +LY  RL+GAVTASLYTYD N DVVRAFCEAWCPSTNTLHTMAGE+ ISLWDLWSFGGLPI+G +Y+ +
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFYAFL

A0A5A7VHW8 PMD domain-containing protein2.5e-9178.46Show/hide
Query:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW
        MVYFTERFLSG RHL IL+D+NQPR+DG SL+VE    G+FAD WP LDN+S+LP+LSVEIPLS+GK+AW++QSSIH EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY
        G VTKVP EFCFTDCYWEWLE VVGR+  +LY  RL+GAVTASLYTYDRN DVVRAFCEAWCPSTNTLHTMAGE+ ISLWDLWSFGGLPI+G+FY
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY

A0A5D3D7V4 PMD domain-containing protein1.0e-8976.92Show/hide
Query:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW
        MVYFTERFLSG RHL IL+D+NQPR+DG SL+VE    G+FAD WP LDN+S+LP+LSVE+PLS+GK+AWV+QSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY
        G VTKVPGEFCFTDCYWEWLE VVGR+  +LY   L+  VTASLYTYDRN DVVRAFCEAWCPSTNTLHTMAGE+ ISLWDLWSF GLPI+G+FY
Subjt:  GAVTKVPGEFCFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50750.1 Plant mobile domain protein family9.3e-0634.43Show/hide
Query:  DARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGN
        +A +F AV AS+Y   +N D++    E WCP T T     GE  ++L D+    G  + G+
Subjt:  DARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGN

AT1G50770.1 Aminotransferase-like, plant mobile domain family protein2.7e-0538.33Show/hide
Query:  ARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGN
        A +F AVTAS Y  + N ++V    E WCP T T     GE  I+L D+    G  + G+
Subjt:  ARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGN

AT1G50790.1 Plant mobile domain protein family7.1e-0638.33Show/hide
Query:  ARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGN
        A +F A+ AS Y   +N D+V    E WCP TNT     GE  I+L D+    G  + G+
Subjt:  ARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGN

AT1G50820.1 Aminotransferase-like, plant mobile domain family protein1.7e-0437.29Show/hide
Query:  ARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRG
        A +F AV AS Y   ++ D+V    E WCP T T     GE  I+L D+    G  + G
Subjt:  ARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACCGAACGCTTCTTATCTGGCAATAGGCACCTTACGATCCTTACTGACAAGAATCAACCAAGAGACGATGGTTTCAGTCTCCTTGTAGAGAATTCGTT
GACGGGTTCTTTTGCAGATTTTTGGCCAAACTTAGACAACAGCTCGATTCTTCCCAAGCTATCTGTGGAGATACCTTTGTCTCAGGGAAAAAATGCATGGGTGATGCAAT
CTTCTATCCATGATGAGGCTCCTAATGCCAATCGAGTCCTTACTCTCGGACATCGTATAATTGAAGGCCAAACCCGTTGGGGTGCCGTGACTAAAGTCCCAGGAGAATTC
TGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTTGTAGTTGGTCGAAGTGGGGGAATTCTCTACGATGCTCGTTTATTCGGTGCCGTAACAGCTTCTTTATACACATA
TGATCGTAACATCGATGTGGTTCGAGCATTTTGTGAAGCTTGGTGTCCTTCAACTAATACTCTCCATACCATGGCGGGCGAGGTGCCCATTTCCTTATGGGACCTGTGGT
CATTTGGGGGTCTTCCAATAAGGGGGAATTTCTATGCCTTCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACCGAACGCTTCTTATCTGGCAATAGGCACCTTACGATCCTTACTGACAAGAATCAACCAAGAGACGATGGTTTCAGTCTCCTTGTAGAGAATTCGTT
GACGGGTTCTTTTGCAGATTTTTGGCCAAACTTAGACAACAGCTCGATTCTTCCCAAGCTATCTGTGGAGATACCTTTGTCTCAGGGAAAAAATGCATGGGTGATGCAAT
CTTCTATCCATGATGAGGCTCCTAATGCCAATCGAGTCCTTACTCTCGGACATCGTATAATTGAAGGCCAAACCCGTTGGGGTGCCGTGACTAAAGTCCCAGGAGAATTC
TGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTTGTAGTTGGTCGAAGTGGGGGAATTCTCTACGATGCTCGTTTATTCGGTGCCGTAACAGCTTCTTTATACACATA
TGATCGTAACATCGATGTGGTTCGAGCATTTTGTGAAGCTTGGTGTCCTTCAACTAATACTCTCCATACCATGGCGGGCGAGGTGCCCATTTCCTTATGGGACCTGTGGT
CATTTGGGGGTCTTCCAATAAGGGGGAATTTCTATGCCTTCCTTTAA
Protein sequenceShow/hide protein sequence
MVYFTERFLSGNRHLTILTDKNQPRDDGFSLLVENSLTGSFADFWPNLDNSSILPKLSVEIPLSQGKNAWVMQSSIHDEAPNANRVLTLGHRIIEGQTRWGAVTKVPGEF
CFTDCYWEWLEFVVGRSGGILYDARLFGAVTASLYTYDRNIDVVRAFCEAWCPSTNTLHTMAGEVPISLWDLWSFGGLPIRGNFYAFL