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PI0009097 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009097
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr06:14491693..14493204
RNA-Seq ExpressionPI0009097
SyntenyPI0009097
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]2.4e-2742.35Show/hide
Query:  MSFNAEAINALYDLPNDVETSGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMA
        + F  +AINALY L N+    G +  ++P  R  ++ALE I WPG  W+  PT KYQL+P+ L TEV+VWL FIKK I PTRHDSTI++E  ML Y    
Subjt:  MSFNAEAINALYDLPNDVETSGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMA

Query:  KKCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIPGGLCNQMALNRMITFHGHK
            N  E+    +++W++ P  A PF    + L +KA P L   Q + +  G+C    L+R IT H +K
Subjt:  KKCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIPGGLCNQMALNRMITFHGHK

KAA0049609.1 transposase [Cucumis melo var. makuwa]1.4e-3251.28Show/hide
Query:  FNAEAINALYDLPNDVET-SGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMAK
        F  E IN LYDLPND+    GQ  +       A++ +++I WP A    TPT + QL+PHQLT E NVWLFFIKKKIFPT HDSTI  E A++ YCI AK
Subjt:  FNAEAINALYDLPNDVET-SGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMAK

Query:  KCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAV-PFLCAIQAIPIPGGLCN
        K  NLG ++  + LSWMR PK A PFP+T++ LC+K +      I  I + GG CN
Subjt:  KCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAV-PFLCAIQAIPIPGGLCN

KAA0062748.1 hypothetical protein E6C27_scaffold382G00810 [Cucumis melo var. makuwa]1.2e-2644.44Show/hide
Query:  SFNAEAINALYDLPNDVET-SGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMA
        SFN +AIN LY+LP+D +    Q +   P   + +  L+VI W GA WE  PTG+ QLYPHQLT E NVWLFFIKKKIFPTRHDST  L  ++    I  
Subjt:  SFNAEAINALYDLPNDVET-SGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMA

Query:  KKCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIPGGLCNQMALNRMITFHGHKE
         +   LG   A        AP+R     +TI  LC+K +  L  +    + GG CN   LNR+I  H ++E
Subjt:  KKCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIPGGLCNQMALNRMITFHGHKE

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-3654.67Show/hide
Query:  FNAEAINALYDLPNDVETSGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMAK
        FN E IN LY+ PND E  GQ  V   T+ +A+EAL+V+AWPG   EV P   +YQLYPH LTT+ NVW+FF K KIFPT +DSTI+++  ++ YCIM K
Subjt:  FNAEAINALYDLPNDVETSGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMAK

Query:  KCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIP
        K INL E+I  +IL+WM  PK AMPFPS +E LC+K +P L       IP
Subjt:  KCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]1.4e-3251.28Show/hide
Query:  FNAEAINALYDLPNDVET-SGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMAK
        F  E IN LYDLPND+    GQ  +       A++ +++I WP A    TPT + QL+PHQLT E NVWLFFIKKKIFPT HDSTI  E A++ YCI AK
Subjt:  FNAEAINALYDLPNDVET-SGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMAK

Query:  KCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAV-PFLCAIQAIPIPGGLCN
        K  NLG ++  + LSWMR PK A PFP+T++ LC+K +      I  I + GG CN
Subjt:  KCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAV-PFLCAIQAIPIPGGLCN

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase7.0e-3351.28Show/hide
Query:  FNAEAINALYDLPNDVET-SGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMAK
        F  E IN LYDLPND+    GQ  +       A++ +++I WP A    TPT + QL+PHQLT E NVWLFFIKKKIFPT HDSTI  E A++ YCI AK
Subjt:  FNAEAINALYDLPNDVET-SGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMAK

Query:  KCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAV-PFLCAIQAIPIPGGLCN
        K  NLG ++  + LSWMR PK A PFP+T++ LC+K +      I  I + GG CN
Subjt:  KCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAV-PFLCAIQAIPIPGGLCN

A0A5A7V6M5 Gag/pol protein1.0e-3654.67Show/hide
Query:  FNAEAINALYDLPNDVETSGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMAK
        FN E IN LY+ PND E  GQ  V   T+ +A+EAL+V+AWPG   EV P   +YQLYPH LTT+ NVW+FF K KIFPT +DSTI+++  ++ YCIM K
Subjt:  FNAEAINALYDLPNDVETSGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMAK

Query:  KCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIP
        K INL E+I  +IL+WM  PK AMPFPS +E LC+K +P L       IP
Subjt:  KCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIP

A0A5D3CBF2 Uncharacterized protein5.8e-2744.44Show/hide
Query:  SFNAEAINALYDLPNDVET-SGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMA
        SFN +AIN LY+LP+D +    Q +   P   + +  L+VI W GA WE  PTG+ QLYPHQLT E NVWLFFIKKKIFPTRHDST  L  ++    I  
Subjt:  SFNAEAINALYDLPNDVET-SGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMA

Query:  KKCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIPGGLCNQMALNRMITFHGHKE
         +   LG   A        AP+R     +TI  LC+K +  L  +    + GG CN   LNR+I  H ++E
Subjt:  KKCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIPGGLCNQMALNRMITFHGHKE

A0A5D3CVL7 Uncharacterized protein7.0e-3351.28Show/hide
Query:  FNAEAINALYDLPNDVET-SGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMAK
        F  E IN LYDLPND+    GQ  +       A++ +++I WP A    TPT + QL+PHQLT E NVWLFFIKKKIFPT HDSTI  E A++ YCI AK
Subjt:  FNAEAINALYDLPNDVET-SGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMAK

Query:  KCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAV-PFLCAIQAIPIPGGLCN
        K  NLG ++  + LSWMR PK A PFP+T++ LC+K +      I  I + GG CN
Subjt:  KCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAV-PFLCAIQAIPIPGGLCN

A0A5D3CW17 Uncharacterized protein1.2e-2742.35Show/hide
Query:  MSFNAEAINALYDLPNDVETSGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMA
        + F  +AINALY L N+    G +  ++P  R  ++ALE I WPG  W+  PT KYQL+P+ L TEV+VWL FIKK I PTRHDSTI++E  ML Y    
Subjt:  MSFNAEAINALYDLPNDVETSGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDSTINLESAMLFYCIMA

Query:  KKCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIPGGLCNQMALNRMITFHGHK
            N  E+    +++W++ P  A PF    + L +KA P L   Q + +  G+C    L+R IT H +K
Subjt:  KKCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIPGGLCNQMALNRMITFHGHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAACTCCCAGACTTCCTCCACACGCCCATCCAGGCGTTTGAGTGGAAGCAATTCTTCAAGGGGCACACCAATGAGTTTCAACGCGGAGGCCATCAACGCGTTATA
TGATTTGCCCAATGATGTTGAAACATCGGGGCAAATATATGTAGATAGCCCTACGAGGAGGATGGCCCGTGAAGCGTTGGAAGTCATCGCATGGCCTGGGGCCGCATGGG
AAGTGACGCCAACGGGGAAGTATCAGCTTTATCCACACCAGCTAACTACAGAGGTAAACGTGTGGCTGTTTTTCATCAAGAAGAAGATCTTCCCAACACGCCATGATAGC
ACCATTAACTTAGAGTCAGCGATGCTATTCTATTGTATAATGGCGAAGAAGTGCATCAACCTTGGCGAACTTATAGCCACATCCATTCTGTCTTGGATGCGAGCTCCCAA
ACGCGCCATGCCCTTCCCTTCCACCATTGAAGCGCTTTGCGTTAAGGCTGTGCCATTCCTATGCGCCATCCAAGCAATTCCAATACCAGGCGGGTTGTGTAACCAAATGG
CTTTAAACCGCATGATCACTTTCCATGGACACAAGGAAATGGAAAGGCGAGCAAAGACTTTGGGTGACACACCTAAAGGCATAGCCCAAGCTGAACGCAAAAGGAAGTCC
CCACCTGTCGCATCAACCCCCCCACCTAAGAGCTCCCCTATCAGTCCAAATAAATCCAGCAGCTCTCAGCCTCCTCGCCTTTCTTCGCCCATTCCAACCCCACCACCTTC
GCCAATTCCCTCTCCCCGCCATTCCCCTCTCCCCCACATTCTTTCCCCCATCAACGTCCCTCACCTTTCCCCACGACCGCCTACCCCTCCGCCCACAAAATCTACCTCCC
CAATCCTTTCTTCAAATGCACCCTCTCCTCGGCGAACAGAGCCCATTTCGCCTCTCAATCTTTCGCCCATCATGGACCTAACCCTACTTCGTAATAACCAGCCAACGGCC
ACCACTGAGATCGTTGAGGTTTTCTACCCCACCATCCACCCGATAGACCCTCCCCCGCGAGCCTCTCCCATTCTTATTATTTTCGAAGAGGACACCCCACCACCCATCCC
ATCACCACCACCACCTACTTTAGATACCGCACAGAACGTTAATGACTCACACATTAAGGACCAAAACCCTATCCTTAATGCAGTTGGCGAGACAGCTTCTTCGGCGCACA
CCACCACTGCTCAACCCTCCACCACGCTTGGAGATGACGAAGAGTTGGGCGTACTATTAGGTTCCCTTGTGTGTAAACCAATGATTGATCATTTTGAACAAGTATTGGCT
CACCAAGCGGACCAGGCGACGCAACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAACTCCCAGACTTCCTCCACACGCCCATCCAGGCGTTTGAGTGGAAGCAATTCTTCAAGGGGCACACCAATGAGTTTCAACGCGGAGGCCATCAACGCGTTATA
TGATTTGCCCAATGATGTTGAAACATCGGGGCAAATATATGTAGATAGCCCTACGAGGAGGATGGCCCGTGAAGCGTTGGAAGTCATCGCATGGCCTGGGGCCGCATGGG
AAGTGACGCCAACGGGGAAGTATCAGCTTTATCCACACCAGCTAACTACAGAGGTAAACGTGTGGCTGTTTTTCATCAAGAAGAAGATCTTCCCAACACGCCATGATAGC
ACCATTAACTTAGAGTCAGCGATGCTATTCTATTGTATAATGGCGAAGAAGTGCATCAACCTTGGCGAACTTATAGCCACATCCATTCTGTCTTGGATGCGAGCTCCCAA
ACGCGCCATGCCCTTCCCTTCCACCATTGAAGCGCTTTGCGTTAAGGCTGTGCCATTCCTATGCGCCATCCAAGCAATTCCAATACCAGGCGGGTTGTGTAACCAAATGG
CTTTAAACCGCATGATCACTTTCCATGGACACAAGGAAATGGAAAGGCGAGCAAAGACTTTGGGTGACACACCTAAAGGCATAGCCCAAGCTGAACGCAAAAGGAAGTCC
CCACCTGTCGCATCAACCCCCCCACCTAAGAGCTCCCCTATCAGTCCAAATAAATCCAGCAGCTCTCAGCCTCCTCGCCTTTCTTCGCCCATTCCAACCCCACCACCTTC
GCCAATTCCCTCTCCCCGCCATTCCCCTCTCCCCCACATTCTTTCCCCCATCAACGTCCCTCACCTTTCCCCACGACCGCCTACCCCTCCGCCCACAAAATCTACCTCCC
CAATCCTTTCTTCAAATGCACCCTCTCCTCGGCGAACAGAGCCCATTTCGCCTCTCAATCTTTCGCCCATCATGGACCTAACCCTACTTCGTAATAACCAGCCAACGGCC
ACCACTGAGATCGTTGAGGTTTTCTACCCCACCATCCACCCGATAGACCCTCCCCCGCGAGCCTCTCCCATTCTTATTATTTTCGAAGAGGACACCCCACCACCCATCCC
ATCACCACCACCACCTACTTTAGATACCGCACAGAACGTTAATGACTCACACATTAAGGACCAAAACCCTATCCTTAATGCAGTTGGCGAGACAGCTTCTTCGGCGCACA
CCACCACTGCTCAACCCTCCACCACGCTTGGAGATGACGAAGAGTTGGGCGTACTATTAGGTTCCCTTGTGTGTAAACCAATGATTGATCATTTTGAACAAGTATTGGCT
CACCAAGCGGACCAGGCGACGCAACTCTAA
Protein sequenceShow/hide protein sequence
MVNSQTSSTRPSRRLSGSNSSRGTPMSFNAEAINALYDLPNDVETSGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEVNVWLFFIKKKIFPTRHDS
TINLESAMLFYCIMAKKCINLGELIATSILSWMRAPKRAMPFPSTIEALCVKAVPFLCAIQAIPIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTPKGIAQAERKRKS
PPVASTPPPKSSPISPNKSSSSQPPRLSSPIPTPPPSPIPSPRHSPLPHILSPINVPHLSPRPPTPPPTKSTSPILSSNAPSPRRTEPISPLNLSPIMDLTLLRNNQPTA
TTEIVEVFYPTIHPIDPPPRASPILIIFEEDTPPPIPSPPPPTLDTAQNVNDSHIKDQNPILNAVGETASSAHTTTAQPSTTLGDDEELGVLLGSLVCKPMIDHFEQVLA
HQADQATQL