; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009133 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009133
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr02:4820161..4827122
RNA-Seq ExpressionPI0009133
SyntenyPI0009133
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025369.1 uncharacterized protein E6C27_scaffold1204G00530 [Cucumis melo var. makuwa]7.6e-14763.85Show/hide
Query:  MTRSSNQELHFFEDLNREVRRIRRERREEN-IHNIP-QDPLDNLEPNLE---QPNLDKETMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLI
        MTRSSN +  +FEDLNREVRRIRRERREEN IHN+  Q+PL  LEP+L+    PNL +  +G+VREKTLREL+EPDEDQRPLCIVIP TTQPFELK  LI
Subjt:  MTRSSNQELHFFEDLNREVRRIRRERREEN-IHNIP-QDPLDNLEPNLE---QPNLDKETMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLI

Query:  HLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEF
        HLL I+KGS GE+ HKHLKDFHMVC SMRPH +SEEQLNLRAFPF LT  AKRWLYYLE   ITTW S KKKFLEKFFPASRANNIRKEIYGIRQAFGE 
Subjt:  HLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEF

Query:  LSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLL
        LSEYWER KEL ASFPHHHISDPSLIQYFYSGLL+ DRNTVD AAGGALADKT  + RELISRM ENSQ+FGN+ASELDNSLTKEVS             
Subjt:  LSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLL

Query:  TSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQ
                +KV KCGVCGLVGHPNDKCP+++++ NI+++YDP                                                       MKQ
Subjt:  TSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQ

Query:  QMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSS-EEKLNSREKPLTSDAKSK
        Q++ LT  ISK+EGKGKL AQ DHAN+SAISLRSGKIL TP++ E+K+ S   PL S  +SK
Subjt:  QMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSS-EEKLNSREKPLTSDAKSK

KAA0031967.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.8e-19676.72Show/hide
Query:  MTRSSNQELHFFEDLNREVRRIRRERREENIHNIP----QDPLDNLEPNLE---QPNLDKETMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPR
        MTRSSN E  +FEDLN+EVRRIRRERREEN  NIP    Q+PL  LEP+L+    PNL +  MG+VREKT+R+L E DEDQRPLCIVI  TTQPFELKPR
Subjt:  MTRSSNQELHFFEDLNREVRRIRRERREENIHNIP----QDPLDNLEPNLE---QPNLDKETMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPR

Query:  LIHLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFG
        LIHLLPI+KG+SGE+PHKHLKDFHMVCDSMRPHG+SEEQLNLRAFPFSLT  AKRWLYYLE GSITTWGS KKKFLEKFFPASR NNIRKEIYGIRQAFG
Subjt:  LIHLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFG

Query:  EFLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTT
        E L +YWE+FKELCA+FPHHHI  PSLIQYFY GLL+ DRNTVDAAAGGALA+K PT+ARELISRMA+NSQ FGN+ASEL+NSLTKEVSELKSQMLNMTT
Subjt:  EFLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTT

Query:  LLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEM
        LLTSFVQG  +KV KC VCGLVGHPNDKCP++++E NI++KYDP+SNTYN GWRDNP LRWGNDNQ+ +QA ++S+NQ TNL+D++KAL TNT+SFQ EM
Subjt:  LLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEM

Query:  KQQMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSS-EEKLNSREKPLTSDAKSK
        KQQM+ LT  ISK++GKGKLPAQP+HAN+S ISLRSGKIL TPS+ E+K+ S   PL S  +SK
Subjt:  KQQMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSS-EEKLNSREKPLTSDAKSK

KAA0058150.1 uncharacterized protein E6C27_scaffold274G004630 [Cucumis melo var. makuwa]2.4e-15676.5Show/hide
Query:  MGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLIHLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLES
        MG+VREK LREL+EP+ED RPLCIVIPPTTQPFELKP LIHLLPI+KGSSGE+PHKHLKDFHMVCDSMRP+ +SEEQLNLRAFPF LT  AK WLYYLE 
Subjt:  MGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLIHLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLES

Query:  GSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKAREL
        GSITTWGS KKKFLEKFFPASRANNIRKEIYGIRQAFGE LS+YWERFKELCAS PH+HI DPSLIQYFYSGLL+ DRNTVDAA GGALADKTPT+AR+L
Subjt:  GSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKAREL

Query:  ISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWG
        ISRM ENSQ+FGN+ASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++++ NI+R+YDPH                 
Subjt:  ISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWG

Query:  NDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHAN
                        GTNLED++KAL TNT+SFQ EMKQQM+ LT  ISK++GKGKLPAQPDHAN
Subjt:  NDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHAN

KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.3e-14880.62Show/hide
Query:  MRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSLIQ
        MRPHG+S+EQLNLRAFPFSLT  AKRWLYY+E GSITTWGS KKKFLEKFFPASRANNIRKEIYGIRQAFGE LS+YW+R KELCASFPHHHISDPSLIQ
Subjt:  MRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSLIQ

Query:  YFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKC
        YF+SGLL+ DRNT+D  AGGALADKTPT+ARELISRM ENSQ+FGN+ASELDNSLTKEVSELKSQMLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKC
Subjt:  YFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKC

Query:  PDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHANI
          ++++ NI+R+YDPHSNTYN GWRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+ LT  ISK++GKGKLPAQPD+AN+
Subjt:  PDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHANI

Query:  SAISLRSGKILGTPSSEEKLNSREK
        SAISLRSGKIL TP+++EK     K
Subjt:  SAISLRSGKILGTPSSEEKLNSREK

TYK10613.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.0e-14670.47Show/hide
Query:  MGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLIHLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLES
        MG+VREKTLREL+EPDEDQRPLCIVIPPTTQPFELK  LIHLLPI+KG                                                  + 
Subjt:  MGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLIHLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLES

Query:  GSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKAREL
         SITTWGS KKKFLEKFF ASRANNIRKEIYGIRQAF E LSEYWERFKELCASFPHHHI DPSL QYFYSGLL+ DRNTVDA AG ALADKTPT+A EL
Subjt:  GSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKAREL

Query:  ISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWG
        ISRMAEN Q+FGN+AS+L+N LTKEVSELKS+MLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKCP+++++ NI+R+YDPH NTYN+GWRD PNLRWG
Subjt:  ISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWG

Query:  NDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSSEEK
        ND Q  +QA S+S+NQGTNLED++KALTTNT+SFQ EMKQQM+ LT  ISK++GKGKLPAQPDHAN+SAISLRSGKIL TP+++EK
Subjt:  NDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSSEEK

TrEMBL top hitse value%identityAlignment
A0A5A7SRF5 Retrotransposon gag protein8.7e-19776.72Show/hide
Query:  MTRSSNQELHFFEDLNREVRRIRRERREENIHNIP----QDPLDNLEPNLE---QPNLDKETMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPR
        MTRSSN E  +FEDLN+EVRRIRRERREEN  NIP    Q+PL  LEP+L+    PNL +  MG+VREKT+R+L E DEDQRPLCIVI  TTQPFELKPR
Subjt:  MTRSSNQELHFFEDLNREVRRIRRERREENIHNIP----QDPLDNLEPNLE---QPNLDKETMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPR

Query:  LIHLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFG
        LIHLLPI+KG+SGE+PHKHLKDFHMVCDSMRPHG+SEEQLNLRAFPFSLT  AKRWLYYLE GSITTWGS KKKFLEKFFPASR NNIRKEIYGIRQAFG
Subjt:  LIHLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFG

Query:  EFLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTT
        E L +YWE+FKELCA+FPHHHI  PSLIQYFY GLL+ DRNTVDAAAGGALA+K PT+ARELISRMA+NSQ FGN+ASEL+NSLTKEVSELKSQMLNMTT
Subjt:  EFLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTT

Query:  LLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEM
        LLTSFVQG  +KV KC VCGLVGHPNDKCP++++E NI++KYDP+SNTYN GWRDNP LRWGNDNQ+ +QA ++S+NQ TNL+D++KAL TNT+SFQ EM
Subjt:  LLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEM

Query:  KQQMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSS-EEKLNSREKPLTSDAKSK
        KQQM+ LT  ISK++GKGKLPAQP+HAN+S ISLRSGKIL TPS+ E+K+ S   PL S  +SK
Subjt:  KQQMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSS-EEKLNSREKPLTSDAKSK

A0A5A7USL5 Retrotrans_gag domain-containing protein1.1e-15676.5Show/hide
Query:  MGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLIHLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLES
        MG+VREK LREL+EP+ED RPLCIVIPPTTQPFELKP LIHLLPI+KGSSGE+PHKHLKDFHMVCDSMRP+ +SEEQLNLRAFPF LT  AK WLYYLE 
Subjt:  MGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLIHLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLES

Query:  GSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKAREL
        GSITTWGS KKKFLEKFFPASRANNIRKEIYGIRQAFGE LS+YWERFKELCAS PH+HI DPSLIQYFYSGLL+ DRNTVDAA GGALADKTPT+AR+L
Subjt:  GSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKAREL

Query:  ISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWG
        ISRM ENSQ+FGN+ASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++++ NI+R+YDPH                 
Subjt:  ISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWG

Query:  NDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHAN
                        GTNLED++KAL TNT+SFQ EMKQQM+ LT  ISK++GKGKLPAQPDHAN
Subjt:  NDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHAN

A0A5A7V0Q7 Retrotransposon gag protein2.6e-14880.62Show/hide
Query:  MRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSLIQ
        MRPHG+S+EQLNLRAFPFSLT  AKRWLYY+E GSITTWGS KKKFLEKFFPASRANNIRKEIYGIRQAFGE LS+YW+R KELCASFPHHHISDPSLIQ
Subjt:  MRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSLIQ

Query:  YFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKC
        YF+SGLL+ DRNT+D  AGGALADKTPT+ARELISRM ENSQ+FGN+ASELDNSLTKEVSELKSQMLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKC
Subjt:  YFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKC

Query:  PDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHANI
          ++++ NI+R+YDPHSNTYN GWRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+ LT  ISK++GKGKLPAQPD+AN+
Subjt:  PDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHANI

Query:  SAISLRSGKILGTPSSEEKLNSREK
        SAISLRSGKIL TP+++EK     K
Subjt:  SAISLRSGKILGTPSSEEKLNSREK

A0A5D3CFE7 Retrotransposon gag protein2.4e-14670.47Show/hide
Query:  MGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLIHLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLES
        MG+VREKTLREL+EPDEDQRPLCIVIPPTTQPFELK  LIHLLPI+KG                                                  + 
Subjt:  MGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLIHLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLES

Query:  GSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKAREL
         SITTWGS KKKFLEKFF ASRANNIRKEIYGIRQAF E LSEYWERFKELCASFPHHHI DPSL QYFYSGLL+ DRNTVDA AG ALADKTPT+A EL
Subjt:  GSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKAREL

Query:  ISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWG
        ISRMAEN Q+FGN+AS+L+N LTKEVSELKS+MLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKCP+++++ NI+R+YDPH NTYN+GWRD PNLRWG
Subjt:  ISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWG

Query:  NDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSSEEK
        ND Q  +QA S+S+NQGTNLED++KALTTNT+SFQ EMKQQM+ LT  ISK++GKGKLPAQPDHAN+SAISLRSGKIL TP+++EK
Subjt:  NDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSSEEK

A0A5D3DIP6 Retrotrans_gag domain-containing protein3.7e-14763.85Show/hide
Query:  MTRSSNQELHFFEDLNREVRRIRRERREEN-IHNIP-QDPLDNLEPNLE---QPNLDKETMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLI
        MTRSSN +  +FEDLNREVRRIRRERREEN IHN+  Q+PL  LEP+L+    PNL +  +G+VREKTLREL+EPDEDQRPLCIVIP TTQPFELK  LI
Subjt:  MTRSSNQELHFFEDLNREVRRIRRERREEN-IHNIP-QDPLDNLEPNLE---QPNLDKETMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLI

Query:  HLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEF
        HLL I+KGS GE+ HKHLKDFHMVC SMRPH +SEEQLNLRAFPF LT  AKRWLYYLE   ITTW S KKKFLEKFFPASRANNIRKEIYGIRQAFGE 
Subjt:  HLLPIYKGSSGENPHKHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEF

Query:  LSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLL
        LSEYWER KEL ASFPHHHISDPSLIQYFYSGLL+ DRNTVD AAGGALADKT  + RELISRM ENSQ+FGN+ASELDNSLTKEVS             
Subjt:  LSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLL

Query:  TSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQ
                +KV KCGVCGLVGHPNDKCP+++++ NI+++YDP                                                       MKQ
Subjt:  TSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEANIIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQ

Query:  QMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSS-EEKLNSREKPLTSDAKSK
        Q++ LT  ISK+EGKGKL AQ DHAN+SAISLRSGKIL TP++ E+K+ S   PL S  +SK
Subjt:  QMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSS-EEKLNSREKPLTSDAKSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCGTTCTTCCAACCAAGAACTACATTTCTTTGAAGACCTTAATAGGGAAGTACGTAGGATTAGGAGAGAAAGGAGAGAAGAAAATATCCATAATATCCCTCAAGA
TCCATTAGACAACTTAGAGCCTAATCTAGAACAACCAAACCTTGATAAAGAAACCATGGGGCAAGTTAGAGAGAAAACCTTAAGAGAGCTTTCCGAGCCAGACGAGGACC
AAAGGCCCCTTTGCATTGTAATTCCCCCAACCACTCAACCCTTCGAACTCAAACCCAGACTAATCCATCTTTTACCAATATACAAGGGTAGTTCAGGAGAGAACCCCCAT
AAACACCTCAAAGACTTTCATATGGTTTGTGACTCTATGAGACCACACGGAGTCTCAGAGGAGCAACTTAACTTGAGAGCCTTTCCATTTTCTTTGACTTACACAGCCAA
AAGATGGCTTTACTATCTAGAGTCAGGGTCCATCACTACTTGGGGAAGCCATAAGAAAAAGTTTTTAGAAAAGTTCTTTCCAGCTTCTAGAGCCAATAATATTAGGAAAG
AAATCTACGGAATAAGGCAAGCTTTTGGGGAGTTTTTGTCAGAATATTGGGAAAGGTTTAAGGAACTCTGCGCTAGCTTCCCCCATCACCATATTTCAGACCCATCACTA
ATACAATATTTCTATTCTGGACTACTAACTATGGATAGAAATACAGTAGATGCTGCAGCAGGTGGTGCCTTGGCAGACAAAACCCCTACTAAAGCAAGAGAGCTCATTTC
AAGGATGGCAGAAAATTCCCAGAATTTTGGAAATAAGGCATCCGAGCTCGACAATTCATTAACTAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAATATGACTACTT
TACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCTAAGTGTGGGGTATGCGGTCTAGTTGGACATCCTAATGACAAGTGCCCTGACTTAGTGAAAGAAGCAAAT
ATCATTAGGAAGTACGATCCTCATAGCAATACTTACAATGTCGGTTGGAGAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACTTCCTC
TTCAAACAATCAGGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTACTACTAATACAATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTTACAAATGACA
TAAGCAAGCTAGAAGGAAAAGGCAAACTTCCGGCTCAGCCAGATCATGCCAATATAAGTGCCATCTCGCTTAGAAGCGGTAAAATTCTGGGAACCCCTTCAAGTGAAGAA
AAGCTAAATAGTAGAGAAAAACCCCTTACCTCGGATGCTAAGTCCAAAGTGCACCACGCAGTAAGGACTATGCTACGCGAGAAGACGTCCAATCGCAGGCTTCTCGGCGA
ACAGGACTACGCGGCAAAAGAACCAACAAGCGAAGAAGGAATGAGAAACCAAAACGCGGGAAAAGCCAAAACCAAACCGCAGAGGAAAGCTTGCCTCGCGAACCAGGCTT
TGCGAAGGAAGAAGAGCCGAGAAGACCTCAGGTCGCGGCAAGACAACCAGGCCAGACGCGAGCTGAACGCGGACAACAACAGGCGACGAGGGAGCTCGCGGAATCCCCCT
TTTTGCTTCTTTGCGGACAACACCCCACCACGCGAACAAGGATCTGCCAAACAGAGAAAACTTACTTCGCGGACAAAACTTAAGCGAAACGCGAAGGGAAAGCTTGGGAG
ACGAAACGGAAGTTTGGCCGGAGAACTTACCAGAGGAAAACCAAAACGAACCGCGAAGGGAACACGGTCACTCTTTCGCGAAAGGAGCCCAAAACGCCCAACCAAATTCC
AAAACTTCTTTTCCGACGAAAAACAACGGTCGGAGAGCTTAAGGACGGCGACAACAACGCACGACGCAAGGGAAAACTGGGGAGAAGAGTCTGAACGCGGCAGAAAGGAA
GAACTGAAGAAGAAGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCCGTTCTTCCAACCAAGAACTACATTTCTTTGAAGACCTTAATAGGGAAGTACGTAGGATTAGGAGAGAAAGGAGAGAAGAAAATATCCATAATATCCCTCAAGA
TCCATTAGACAACTTAGAGCCTAATCTAGAACAACCAAACCTTGATAAAGAAACCATGGGGCAAGTTAGAGAGAAAACCTTAAGAGAGCTTTCCGAGCCAGACGAGGACC
AAAGGCCCCTTTGCATTGTAATTCCCCCAACCACTCAACCCTTCGAACTCAAACCCAGACTAATCCATCTTTTACCAATATACAAGGGTAGTTCAGGAGAGAACCCCCAT
AAACACCTCAAAGACTTTCATATGGTTTGTGACTCTATGAGACCACACGGAGTCTCAGAGGAGCAACTTAACTTGAGAGCCTTTCCATTTTCTTTGACTTACACAGCCAA
AAGATGGCTTTACTATCTAGAGTCAGGGTCCATCACTACTTGGGGAAGCCATAAGAAAAAGTTTTTAGAAAAGTTCTTTCCAGCTTCTAGAGCCAATAATATTAGGAAAG
AAATCTACGGAATAAGGCAAGCTTTTGGGGAGTTTTTGTCAGAATATTGGGAAAGGTTTAAGGAACTCTGCGCTAGCTTCCCCCATCACCATATTTCAGACCCATCACTA
ATACAATATTTCTATTCTGGACTACTAACTATGGATAGAAATACAGTAGATGCTGCAGCAGGTGGTGCCTTGGCAGACAAAACCCCTACTAAAGCAAGAGAGCTCATTTC
AAGGATGGCAGAAAATTCCCAGAATTTTGGAAATAAGGCATCCGAGCTCGACAATTCATTAACTAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAATATGACTACTT
TACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCTAAGTGTGGGGTATGCGGTCTAGTTGGACATCCTAATGACAAGTGCCCTGACTTAGTGAAAGAAGCAAAT
ATCATTAGGAAGTACGATCCTCATAGCAATACTTACAATGTCGGTTGGAGAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACTTCCTC
TTCAAACAATCAGGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTACTACTAATACAATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTTACAAATGACA
TAAGCAAGCTAGAAGGAAAAGGCAAACTTCCGGCTCAGCCAGATCATGCCAATATAAGTGCCATCTCGCTTAGAAGCGGTAAAATTCTGGGAACCCCTTCAAGTGAAGAA
AAGCTAAATAGTAGAGAAAAACCCCTTACCTCGGATGCTAAGTCCAAAGTGCACCACGCAGTAAGGACTATGCTACGCGAGAAGACGTCCAATCGCAGGCTTCTCGGCGA
ACAGGACTACGCGGCAAAAGAACCAACAAGCGAAGAAGGAATGAGAAACCAAAACGCGGGAAAAGCCAAAACCAAACCGCAGAGGAAAGCTTGCCTCGCGAACCAGGCTT
TGCGAAGGAAGAAGAGCCGAGAAGACCTCAGGTCGCGGCAAGACAACCAGGCCAGACGCGAGCTGAACGCGGACAACAACAGGCGACGAGGGAGCTCGCGGAATCCCCCT
TTTTGCTTCTTTGCGGACAACACCCCACCACGCGAACAAGGATCTGCCAAACAGAGAAAACTTACTTCGCGGACAAAACTTAAGCGAAACGCGAAGGGAAAGCTTGGGAG
ACGAAACGGAAGTTTGGCCGGAGAACTTACCAGAGGAAAACCAAAACGAACCGCGAAGGGAACACGGTCACTCTTTCGCGAAAGGAGCCCAAAACGCCCAACCAAATTCC
AAAACTTCTTTTCCGACGAAAAACAACGGTCGGAGAGCTTAAGGACGGCGACAACAACGCACGACGCAAGGGAAAACTGGGGAGAAGAGTCTGAACGCGGCAGAAAGGAA
GAACTGAAGAAGAAGAGCTGA
Protein sequenceShow/hide protein sequence
MTRSSNQELHFFEDLNREVRRIRRERREENIHNIPQDPLDNLEPNLEQPNLDKETMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPRLIHLLPIYKGSSGENPH
KHLKDFHMVCDSMRPHGVSEEQLNLRAFPFSLTYTAKRWLYYLESGSITTWGSHKKKFLEKFFPASRANNIRKEIYGIRQAFGEFLSEYWERFKELCASFPHHHISDPSL
IQYFYSGLLTMDRNTVDAAAGGALADKTPTKARELISRMAENSQNFGNKASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVKEAN
IIRKYDPHSNTYNVGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEMKQQMSHLTNDISKLEGKGKLPAQPDHANISAISLRSGKILGTPSSEE
KLNSREKPLTSDAKSKVHHAVRTMLREKTSNRRLLGEQDYAAKEPTSEEGMRNQNAGKAKTKPQRKACLANQALRRKKSREDLRSRQDNQARRELNADNNRRRGSSRNPP
FCFFADNTPPREQGSAKQRKLTSRTKLKRNAKGKLGRRNGSLAGELTRGKPKRTAKGTRSLFRERSPKRPTKFQNFFSDEKQRSESLRTATTTHDARENWGEESERGRKE
ELKKKS