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PI0009198 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009198
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:9493210..9493455
RNA-Seq ExpressionPI0009198
SyntenyPI0009198
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045021.1 hypothetical protein E6C27_scaffold30G00060 [Cucumis melo var. makuwa]2.0e-1762.5Show/hide
Query:  QFYFGLSEDTQQTPDVVFVEG-MLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG
        +FYFGLSEDTQQT   +FV G ML+SSYN+I+ TLD MT+NSQEW+DDGF S+Q++R  RGN +  D+G+DRN ++AL+G
Subjt:  QFYFGLSEDTQQTPDVVFVEG-MLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG

KAA0046468.1 hypothetical protein E6C27_scaffold543G00470 [Cucumis melo var. makuwa]5.9e-1765.43Show/hide
Query:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG
        ME+FYF LSED QQT DVVFV G+L++SYNQ K+ LD M SNSQE RDD   S+Q+N E RG T   DEGMDRN M+ LQG
Subjt:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]2.0e-1759.26Show/hide
Query:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG
        MEQFYFGLS++T Q+ ++VF  GML+SSYNQIK+ LD M SNSQEWRD+ F SR  +R  +GN   I++G+D + M+ALQG
Subjt:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]1.0e-1355.56Show/hide
Query:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG
        ME FYFGLS+DT Q  + +FV GML+SSYNQIK+TLD+M++NSQEW D GF SR + R K        EG+D++ ++ LQG
Subjt:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG

KGN53801.1 hypothetical protein Csa_014772 [Cucumis sativus]5.1e-1356.63Show/hide
Query:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQK---NREKRGNTNMIDEGMDRNTMLALQ
        +EQFYFGLS DTQQ  D VF+ GML+ S N IK+TLDAM SNSQEWRD+ F S  +   NR ++G TN   +G + N M+ LQ
Subjt:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQK---NREKRGNTNMIDEGMDRNTMLALQ

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein5.0e-1455.56Show/hide
Query:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG
        ME FYFGLS+DT Q  + +FV GML+SSYNQIK+TLD+M++NSQEW D GF SR + R K        EG+D++ ++ LQG
Subjt:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG

A0A0A0L0Y4 Uncharacterized protein2.5e-1356.63Show/hide
Query:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQK---NREKRGNTNMIDEGMDRNTMLALQ
        +EQFYFGLS DTQQ  D VF+ GML+ S N IK+TLDAM SNSQEWRD+ F S  +   NR ++G TN   +G + N M+ LQ
Subjt:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQK---NREKRGNTNMIDEGMDRNTMLALQ

A0A5A7TUE1 Uncharacterized protein2.8e-1765.43Show/hide
Query:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG
        ME+FYF LSED QQT DVVFV G+L++SYNQ K+ LD M SNSQE RDD   S+Q+N E RG T   DEGMDRN M+ LQG
Subjt:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG

A0A5D3CC26 Uncharacterized protein9.7e-1859.26Show/hide
Query:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG
        MEQFYFGLS++T Q+ ++VF  GML+SSYNQIK+ LD M SNSQEWRD+ F SR  +R  +GN   I++G+D + M+ALQG
Subjt:  MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG

A0A5D3CV99 Uncharacterized protein9.7e-1862.5Show/hide
Query:  QFYFGLSEDTQQTPDVVFVEG-MLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG
        +FYFGLSEDTQQT   +FV G ML+SSYN+I+ TLD MT+NSQEW+DDGF S+Q++R  RGN +  D+G+DRN ++AL+G
Subjt:  QFYFGLSEDTQQTPDVVFVEG-MLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAGTTCTATTTTGGGTTAAGTGAGGATACACAACAGACGCCTGATGTTGTGTTTGTAGAAGGGATGCTTAAAAGCTCCTATAACCAGATTAAATCTACGTTGGA
CGCTATGACCAGCAACAGTCAAGAATGGCGAGATGATGGTTTTGTCTCGCGGCAAAAGAACAGAGAAAAGAGAGGAAACACAAACATGATTGATGAAGGAATGGACAGGA
ACACGATGTTGGCACTTCAAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACAGTTCTATTTTGGGTTAAGTGAGGATACACAACAGACGCCTGATGTTGTGTTTGTAGAAGGGATGCTTAAAAGCTCCTATAACCAGATTAAATCTACGTTGGA
CGCTATGACCAGCAACAGTCAAGAATGGCGAGATGATGGTTTTGTCTCGCGGCAAAAGAACAGAGAAAAGAGAGGAAACACAAACATGATTGATGAAGGAATGGACAGGA
ACACGATGTTGGCACTTCAAGGATAA
Protein sequenceShow/hide protein sequence
MEQFYFGLSEDTQQTPDVVFVEGMLKSSYNQIKSTLDAMTSNSQEWRDDGFVSRQKNREKRGNTNMIDEGMDRNTMLALQG