CuGenDBv2

Gene ID	PI0009202
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Beta-galactosidase
Genome location	chr02:9885342..9885548
RNA-Seq Expression	PI0009202
Synteny	PI0009202
Gene Ontology terms	GO:0001522 - pseudouridine synthesis (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0016310 - phosphorylation (biological process) GO:0015074 - DNA integration (biological process) GO:0006310 - DNA recombination (biological process) GO:0006303 - double-strand break repair via nonhomologous end joining (biological process) GO:0000723 - telomere maintenance (biological process) GO:0043564 - Ku70:Ku80 complex (cellular component) GO:0005525 - GTP binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0003723 - RNA binding (molecular function) GO:0009982 - pseudouridine synthase activity (molecular function) GO:0003684 - damaged DNA binding (molecular function) GO:0016301 - kinase activity (molecular function) GO:0003678 - DNA helicase activity (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0042162 - telomeric DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0032571.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.1e-19

72.06

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Query:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL
        M L+G H+FGFLTGE  RP+ GD  E  WKGEDS IRS LINSMEPQIGK LLYAAT KD+WDTTQ +
Subjt:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL

KAA0042445.1 Beta-galactosidase [Cucumis melo var. makuwa]

8.1e-20

73.53

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Query:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL
        MILKGSHKF FLTGEIP+P   D QE +WK ED LIR+ LINSM+PQI KSLLYA T KDIWDTT++L
Subjt:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL

KAA0053589.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]

9.6e-21

76.47

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Query:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL
        M L+G H+FGFLTGE  RP  GD  E  WKGEDSLIRS LINSMEPQIGK LLYAATTKD+WDTTQ L
Subjt:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL

KAA0059996.1 putative tRNA pseudouridine synthase [Cucumis melo var. makuwa]

2.1e-20

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Query:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL
        M L+G H+FGFLTGE  RP+ GD  E  WKGEDSLIRS LINSMEPQIGK LLYAAT KD+WDTTQ L
Subjt:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL

XP_038899041.1 uncharacterized protein LOC120086450 [Benincasa hispida]

2.8e-20

72.06

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Query:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL
        MIL+  HKFG+LTGEIP+P  GDPQE  WKGEDSL+R  LINSME +IG+ LLYAAT KDIWD  QQL
Subjt:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SLC6 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

5.1e-20

73.53

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Query:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL
        M L+G H+FGFLTGE  RP  GD  E  WKGEDS+IRS LINSMEPQIGK LLYAAT KD+WDTTQ L
Subjt:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL

A0A5A7SSP2 Beta-galactosidase

5.1e-20

72.06

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Query:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL
        M L+G H+FGFLTGE  RP+ GD  E  WKGEDS IRS LINSMEPQIGK LLYAAT KD+WDTTQ +
Subjt:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL

A0A5A7TLY2 Beta-galactosidase

3.9e-20

73.53

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Query:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL
        MILKGSHKF FLTGEIP+P   D QE +WK ED LIR+ LINSM+PQI KSLLYA T KDIWDTT++L
Subjt:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL

A0A5A7UJF3 UBN2_3 domain-containing protein

4.6e-21

76.47

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Query:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL
        M L+G H+FGFLTGE  RP  GD  E  WKGEDSLIRS LINSMEPQIGK LLYAATTKD+WDTTQ L
Subjt:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL

A0A5A7V0I4 Putative tRNA pseudouridine synthase

1.0e-20

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Query:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL
        M L+G H+FGFLTGE  RP+ GD  E  WKGEDSLIRS LINSMEPQIGK LLYAAT KD+WDTTQ L
Subjt:  MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

7.1e-06

28.79

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Query:  LKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL
        L+ + KFGF+ G +P+P    P    W+  ++++   L+NSM  ++ +S++YA T   +W+  +++
Subjt:  LKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL

Sequences

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CDS sequence

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ATGATCCTTAAAGGGAGCCACAAGTTTGGTTTTTTGACAGGGGAGATACCTCGTCCTACATCGGGAGACCCTCAGGAATGGTACTGGAAAGGGGAGGACTCTCTTATCCG
ATCCACATTGATCAACAGTATGGAACCACAGATCGGCAAATCCTTACTGTATGCTGCAACCACTAAGGACATTTGGGATACGACTCAACAATTGTAG

mRNA sequence

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Protein sequence

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MILKGSHKFGFLTGEIPRPTSGDPQEWYWKGEDSLIRSTLINSMEPQIGKSLLYAATTKDIWDTTQQL

PI0009202 (gene) of Melon (PI 482460) v1 genome